Gene

KWMTBOMO11831

Pre Gene Modal

BGIBMGA014449

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):1408871-1417873      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.89

CDS

ATGATACGTTGCCAGATACTATATATATTTAAATTATTAACGGAATTATTTTACAGGAACCGCATCGAGAGAACCGCTTCAAAACAATGGCGTGGCTCGGTGCGGCGCATCATCTCCGCAACTGTCTATAACCTGTCCTGTTTCACACACGGGTGTAGCACCGGCTGGGTGTCCGGAGTCTTAGGAAACGAAGCGTTGACGGGCGGGGCGTGGCTGGCCGCCCTGCCGTGCCTGGTAGCACTACCGGCAGCTCCATTCTTCGCCGTGCTGGCTGACGCGAGGGGAAGGAAGGCGGGCGCTTTTTGCATTTGCATCAGTTTTATCTTGAGCTGGTCTTTAGCGGCGTGGTGTGGTCCGCGAGGAGTATGGGCTGCCAGGGTTGCAGCCGGCGCAGGGGGTGCGGGCGCGCTTGCCCTCGCACCCCTGTACTGCGCGGAGATAGCGCCACGCACGAGAGGGCTGGCTGCGATGCCAGCACTGGCTTGCAGTTGCGGCATCCTGTTTGCTTACGCGGCAGGTGGCATGCTATCAGCGCACGCATTGTCCTTATCAATGGCCGTACCGCCTTCCGCACTCCTGGTGTCGCTGATATGGCTGCCAGAGACACCTTCGTTTCTGATCAGCATCGGAAGGGTTCAGGATGCCGCAAAGATAATTTGCTGGTTCGACGGCTCCGATTTCAGGGAAGATCTCACCGATGTCATAGAACAACAAGAGGTGAGGATCAGGACCTCAGACTGCTACGGGAGTAGACGGGAGGCGATGCGACGTCAAGACTCTGACGCGTTCCAGCCCATGTTGAAGCGTAGCAGCGGCTTAGAATCTAACAGCGATAAAAAAACCGAGCAATCAGCTTGCAAAGAGTTATTTAGGCATCGCCGCTCCCGGCGAGCTCTCCTCTCGTGTGCGGTGCTCATCTGCGCGGCAGCCGGATCTGGTGCAGGGGCTGTCAACAGCTTCGCAGCGGCAGTACTGAGGCACTCCTCACACGCTGTGCCGCTTCTGAACATGACAGCTTACAACTTCACGATCAACGATGGGTCTCTTCCAAGGCCACTATTCGAGACCTCGGAAGCTGGTGCAATACTTTGTGGTGCCGCATTGGTACTTGGAGCTACGATAGCTACGATTACTGTTGACAAACTTGGAAGGAAAATGCTCCTACTGTGGTCCTGCTCAGGGATAACGTGCTGCCTGATCGTTCTCGGGGTGTACTGCGACCCCCACCTGCGCCTGCACTCCTGGTACTCGCAGCGACTGTGGCCTTACACAGACGAAGACACCCAATCAAAGGAATTGATTGAAGCTTTTAATATTACGAGTAACGTAAACTTCACAAAGCCCTGGGATTATAGGATTAGTGTGGAAAGTGAGAATTTGACTGACAGCTTCATGAGGAGTACGAAGGCTGCTCGGACACATGCAGAGGAGCAAAGGATGTGGGCCCCCGTGGCTTTGCTATCTACAGTATTATTTTTGTACAACATTGGCCTGGGTTCCGTGCCTTTTGTACTCGTCTCGGAGCTTTTTTCGATAAATGTCCGTAGTCTGGCATCAAGTCTGCTCATTTCATGGACGTGGCTGAGCAGCTTTCTCCTTCTGAGGTACTACGGTACTATTGCTGTCTCTCTCGGTCTCCACGGAACCTATTACATATCAGCTTCCATCACGTTTCTGGCATCCTTGTACATATTCCTGGTCTTGCCCGAAACGAAAGGGAAATCGCAAGAGCAGATTGAAGAAATTCTCGACGGGCCAATGTTGGTTTTGAGGAGCACGAAGAAGAACCAAAACCAGCGATGA

Protein

MIRCQILYIFKLLTELFYRNRIERTASKQWRGSVRRIISATVYNLSCFTHGCSTGWVSGVLGNEALTGGAWLAALPCLVALPAAPFFAVLADARGRKAGAFCICISFILSWSLAAWCGPRGVWAARVAAGAGGAGALALAPLYCAEIAPRTRGLAAMPALACSCGILFAYAAGGMLSAHALSLSMAVPPSALLVSLIWLPETPSFLISIGRVQDAAKIICWFDGSDFREDLTDVIEQQEVRIRTSDCYGSRREAMRRQDSDAFQPMLKRSSGLESNSDKKTEQSACKELFRHRRSRRALLSCAVLICAAAGSGAGAVNSFAAAVLRHSSHAVPLLNMTAYNFTINDGSLPRPLFETSEAGAILCGAALVLGATIATITVDKLGRKMLLLWSCSGITCCLIVLGVYCDPHLRLHSWYSQRLWPYTDEDTQSKELIEAFNITSNVNFTKPWDYRISVESENLTDSFMRSTKAARTHAEEQRMWAPVALLSTVLFLYNIGLGSVPFVLVSELFSINVRSLASSLLISWTWLSSFLLLRYYGTIAVSLGLHGTYYISASITFLASLYIFLVLPETKGKSQEQIEEILDGPMLVLRSTKKNQNQR

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9JY31   A0A2H1V6U2   A0A2A4JCE7   A0A0N1PHI9   A0A0L7KA11   A0A2P8ZM01   + More
A0A026WMM0   E2BT94   F4WBY5   V5GV83   A0A195BM51   A0A158NZ11   A0A026WP92   A0A3L8DXN6   A0A195FTD3   A0A3Q3E8J9   A0A3Q3EBD5   A0A151J628   A0A226EFB2   A0A151IEK9   A0A195FPC4   E0VNX8   A0A3Q3JG04   A0A3P8W6P3   A0A2G5BAM0   A0A3Q2C7A2   A0A1Y1MRS8   E2A9Z9   A0A084VRC5   A0A182MI44   Q7PR34   A0A182LFS7   D6X033   A0A3Q3KU25   A0A182N634  

Pubmed

19121390    26354079    26227816    29403074    24508170    30249741    + More
20798317    21719571    21347285    20566863    24487278    25977457    28004739    24438588    12364791    14747013    17210077    20966253    18362917    19820115   

EMBL

BABH01041989    BABH01041990    ODYU01000976    SOQ36541.1    NWSH01001935    PCG69631.1    + More
KQ459838    KPJ19746.1    JTDY01010193    KOB60233.1    PYGN01000019    PSN57531.1    KK107151    QOIP01000003    EZA57322.1    RLU25205.1    GL450384    EFN81096.1    GL888067    EGI68274.1    GALX01004323    JAB64143.1    KQ976444    KYM86198.1    ADTU01004466    KK107139    EZA57783.1    RLU25240.1    KQ981276    KYN43567.1    KQ979883    KYN18677.1    LNIX01000004    OXA56232.1    KQ977889    KYM99007.1    KQ981382    KYN42246.1    DS235354    EEB15084.1    KZ303502    PIA16050.1    GEZM01029704    JAV85987.1    GL437987    EFN69767.1    ATLV01015604    KE525023    KFB40519.1    AXCM01000884    AAAB01008859    EAA07901.5    KQ971364    EFA10054.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000245037    UP000053097    + More
UP000279307    UP000008237    UP000007755    UP000078540    UP000005205    UP000078541    UP000261660    UP000078492    UP000198287    UP000078542    UP000009046    UP000261600    UP000265120    UP000242474    UP000265020    UP000000311    UP000030765    UP000075883    UP000007062    UP000075882    UP000007266    UP000261640    UP000075884   

PRIDE

H9JY31   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JY31   A0A2H1V6U2   A0A2A4JCE7   A0A0N1PHI9   A0A0L7KA11   A0A2P8ZM01   + More
A0A026WMM0   E2BT94   F4WBY5   V5GV83   A0A195BM51   A0A158NZ11   A0A026WP92   A0A3L8DXN6   A0A195FTD3   A0A3Q3E8J9   A0A3Q3EBD5   A0A151J628   A0A226EFB2   A0A151IEK9   A0A195FPC4   E0VNX8   A0A3Q3JG04   A0A3P8W6P3   A0A2G5BAM0   A0A3Q2C7A2   A0A1Y1MRS8   E2A9Z9   A0A084VRC5   A0A182MI44   Q7PR34   A0A182LFS7   D6X033   A0A3Q3KU25   A0A182N634  

PDB

4LDS     E-value=0.000275819,     Score=107

KEGG

101743980    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0032440   GO:0005887   GO:0005351   GO:0043565   GO:0006810   GO:0016020   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824   GO:0055085  

Length:

600

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

258.95261

Exp number, first 60 AAs:

20.29922

Total prob of N-in:

0.91789

POSSIBLE N-term signal

sequence

inside

1  -  36

TMhelix

37  -  59

outside

60  -  68

TMhelix

69  -  91

inside

92  -  97

TMhelix

98  -  115

outside

116  -  124

TMhelix

125  -  147

inside

148  -  153

TMhelix

154  -  176

outside

177  -  190

TMhelix

191  -  210

inside

211  -  298

TMhelix

299  -  321

outside

322  -  356

TMhelix

357  -  379

inside

380  -  385

TMhelix

386  -  405

outside

406  -  489

TMhelix

490  -  512

inside

513  -  516

TMhelix

517  -  539

outside

540  -  548

TMhelix

549  -  568

inside

569  -  600

 

 

Pi

267.592633

Theta

178.71795

Tajima's D

1.583931

CLR

0.136277

CSRT

0.807559622018899

Interpretation

Uncertain