Gene

KWMTBOMO11827

Pre Gene Modal

BGIBMGA013687

Annotation

chorion_specific_C/EBP_[Bombyx_mori]

Location

Bomo_Chr20(-):1270812-1300946      View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear   Reliability : 4.643

CDS

ATGTACGATGCGGCGGCAGCGCCTCCGCCGCCTCCCCAACCAGACCTCAAAAAAGTCGTCGAGGATAAAAGATCGGCTTTCCCACCACCGGAACTCGACGAGCTCAATGGACAGGAGATCAGCTTGGATCTGCAACACCTCATCGAGGATCAGTTCCGGGGCGAGGAAACGATGGCCCTCTTTCAGGAAATCCTACCCGGAGGTCGATCGCCTCAGCCCCGGTTCACGAGGACGACGCTGGCGTACATGCCGCAACCGGTCCACTCCGGAGCGTCCTACGCGCCAGTACAAGCCAGCTCGGCACACGAGCAGGCGCCCCCAATTAAAGAAGAGCCGCCAGAACCGCAGGACTTCCGAAGAACGGTCACATGCTCGCAATACACAGGACAATACAATCCGCAGCCGCCAGTCGGCGTTAACAATCCTTACACAGGAAGTTTCACACCCCTACCGCCTCTGGGAGGACCTCTGCTTCCTCCTCTGCTGAAACACAAACCGGCACCTCCGAGACGATCCTCAGGCAAAGTAATAGACAAGGGAACTGACGAATACAGAAGGCGAAGGGAGCGCAACAACATAGCCGTGAGGAAATCCCGGGAAAAGGCTAAAGTACGTTCCCGCGAAGTCGAAGAAAAAGTGAAAACATTGCTGAGAGAGAAGGAGGCCTTGCTGAAGAGGCTCGAGGCGGTTTCGGGGGAGCTGAGCCTCCACAAGCAGATGTACGTGCACCTGATAAACTTGAACCACCCGGAGATCACGGAGCTGTGCCGGTCGATGCTGCAGCTGGGAGGCCCGCACTCCCAGGACCACACGCTTTGA

Protein

MYDAAAAPPPPPQPDLKKVVEDKRSAFPPPELDELNGQEISLDLQHLIEDQFRGEETMALFQEILPGGRSPQPRFTRTTLAYMPQPVHSGASYAPVQASSAHEQAPPIKEEPPEPQDFRRTVTCSQYTGQYNPQPPVGVNNPYTGSFTPLPPLGGPLLPPLLKHKPAPPRRSSGKVIDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEEKVKTLLREKEALLKRLEAVSGELSLHKQMYVHLINLNHPEITELCRSMLQLGGPHSQDHTL

Uniprot

Q38Q34   A0A2A4K6V9   A0A3S2M5X0   A0A2H1WIZ2   A0A0N1PJV0   A0A194Q6Z9   + More
A0A212F933   A0A0L7LLB3   A0A1B0DI02   A0A1B0GJ60   A0A1L8DIT6   Q7PSQ9   B0W7F3   A0A182KDS2   A0A336K8F1   Q17GX7   A0A1S4F2Y9   A0A182H8I9   A0A0K8TSC9   A0A0A1XN04   A0A1A9X2F9   A0A1B0G7V5   W8BPK2   A0A1A9XXV0   A0A1B0ADD0   A0A1A9VQ79   B4QBX4   A0A0K8U6A7   A0A1W4X310   A0A0L0BTR9   T1H5Y4   D6WSV6   E2B0S3   A0A1B6MMJ6   A0A1B6H8G7   A0A1B6GNM0   K7J0I8   A0A1Y1KJI8   A0A0J7NFA2   A0A026WYG6   A0A151IMJ2   A0A310SU83   A0A087ZZ61   A0A2S2NEY0   A0A2H8TYD4   A0A158NLI8   N6TT35   A0A195B1H0   A0A0L7RDM0   A0A195E6D7   E9I8R9   A0A2A3EIF4   J9JUE9   A0A154PQF5   A0A0A9YSI6   A0A3Q0IS76   E2BGL0   A0A146KXF4   F4WW11   A0A2J7R5X4  

Pubmed

16202393    19121390    26354079    22118469    26227816    12364791    + More
17510324    26483478    26369729    25830018    24495485    17994087    26108605    18362917    19820115    20798317    20075255    28004739    24508170    30249741    21347285    23537049    21282665    25401762    26823975    21719571   

EMBL

BABH01040620    DQ149981    DQ149982    AAZ84929.1    NWSH01000066    PCG80005.1    + More
RSAL01000025    RVE52111.1    ODYU01008648    SOQ52414.1    KQ459838    KPJ19744.1    KQ459460    KPJ00775.1    AGBW02009650    OWR50252.1    JTDY01000647    KOB76348.1    AJVK01015435    AJWK01019388    GFDF01007814    JAV06270.1    AAAB01008816    EAA05185.5    DS231853    EDS37868.1    UFQS01000175    UFQT01000175    SSX00761.1    SSX21141.1    CH477254    EAT45947.1    JXUM01029872    KQ560866    KXJ80566.1    GDAI01000763    JAI16840.1    GBXI01002037    JAD12255.1    CCAG010021503    GAMC01007897    JAB98658.1    CM000362    EDX08529.1    GDHF01030122    JAI22192.1    JRES01001473    KNC22629.1    KQ971352    EFA06345.2    GL444666    EFN60745.1    GEBQ01002888    JAT37089.1    GECU01036775    GECU01025078    JAS70931.1    JAS82628.1    GECZ01005745    JAS64024.1    GEZM01081908    JAV61484.1    LBMM01005782    KMQ91210.1    KK107063    QOIP01000005    EZA61077.1    RLU22956.1    KQ977054    KYN06083.1    KQ760243    OAD61272.1    GGMR01003134    MBY15753.1    GFXV01007452    MBW19257.1    ADTU01019473    APGK01055478    KB741266    KB632194    ENN71506.1    ERL89938.1    KQ976662    KYM78338.1    KQ414613    KOC69087.1    KQ979579    KYN20651.1    GL761646    EFZ23032.1    KZ288231    PBC31565.1    ABLF02035570    KQ435037    KZC14146.1    GBHO01008475    GDHC01013126    JAG35129.1    JAQ05503.1    GL448189    EFN85203.1    GDHC01017485    JAQ01144.1    GL888404    EGI61600.1    NEVH01006987    PNF36238.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000092462    UP000092461    UP000007062    UP000002320    UP000075881    UP000008820    UP000069940    UP000249989    UP000091820    UP000092444    UP000092443    UP000092445    UP000078200    UP000000304    UP000192223    UP000037069    UP000015102    UP000007266    UP000000311    UP000002358    UP000036403    UP000053097    UP000279307    UP000078542    UP000005203    UP000005205    UP000019118    UP000030742    UP000078540    UP000053825    UP000078492    UP000242457    UP000007819    UP000076502    UP000079169    UP000008237    UP000007755    UP000235965   

PRIDE

Q38Q34   

Pfam

PF07716   bZIP_2

Interpro

IPR004827   bZIP       

ProteinModelPortal

Q38Q34   A0A2A4K6V9   A0A3S2M5X0   A0A2H1WIZ2   A0A0N1PJV0   A0A194Q6Z9   + More
A0A212F933   A0A0L7LLB3   A0A1B0DI02   A0A1B0GJ60   A0A1L8DIT6   Q7PSQ9   B0W7F3   A0A182KDS2   A0A336K8F1   Q17GX7   A0A1S4F2Y9   A0A182H8I9   A0A0K8TSC9   A0A0A1XN04   A0A1A9X2F9   A0A1B0G7V5   W8BPK2   A0A1A9XXV0   A0A1B0ADD0   A0A1A9VQ79   B4QBX4   A0A0K8U6A7   A0A1W4X310   A0A0L0BTR9   T1H5Y4   D6WSV6   E2B0S3   A0A1B6MMJ6   A0A1B6H8G7   A0A1B6GNM0   K7J0I8   A0A1Y1KJI8   A0A0J7NFA2   A0A026WYG6   A0A151IMJ2   A0A310SU83   A0A087ZZ61   A0A2S2NEY0   A0A2H8TYD4   A0A158NLI8   N6TT35   A0A195B1H0   A0A0L7RDM0   A0A195E6D7   E9I8R9   A0A2A3EIF4   J9JUE9   A0A154PQF5   A0A0A9YSI6   A0A3Q0IS76   E2BGL0   A0A146KXF4   F4WW11   A0A2J7R5X4  

PDB

1HJB     E-value=7.41102e-05,     Score=108

KEGG

692780    K10052 CCAAT/enhancer binding protein (C/EBP), invertebrate | (RefSeq) C/EBP; chorion specific C/EBP

GO

GO:0003700   GO:0006355   GO:0043565   GO:0006810   GO:0016020   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

272

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00044

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01462

outside

1  -  272

 

 

Pi

193.94257

Theta

172.266096

Tajima's D

0.369718

CLR

0.41399

CSRT

0.477426128693565

Interpretation

Uncertain