Silkworm Genome Informatics Database

Gene

KWMTBOMO11822 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011597

Annotation

PREDICTED:_influenza_virus_NS1A-binding_protein_homolog_A-like?_partial_[Bombyx_mori]

Location

Bomo_Chr20(-):1118846-1145756 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.045 Nuclear Reliability : 1.099

CDS

ATGAGACCTCAAGGCGACTACAGGAATGGCGATGGACGAGAGGAAGACAGCGAAGGCGAAGAAAGCAGTGCACTTGAAGACGAATTATCCTTGTATGACCCCGATGCCCCAGCACGAGCTTTAAGCGCTTTAAACGCTTTACGCAAGTCCCGACAGCATTATGACGCGGTTCTCGTCGCCGGAGGAACTGAGGTTGCCGCCCACAGAGCAGTCCTCGCCGCTGCCTCGCCATACCTACTCGAAGCGTTATCACCAGCCCCCGTGACCACATCACCAGCACCGGCTTCCGCTCCTGTGTACCGGGTGGAAGACGTGGACGCGGACGCCTTGAGGGAACTTGTGGAATACGCTTACACCGGTCGAGTTCGGGTCAAAGATACGCTCTCGGCCCGGAGATTGTATCGTGCCGCCTGGAGGCTGCGTGTCGAGTCGGTCAGGGCTCACCTGGCGGACCGTTTGCTGAAGCGATTGGCTCCGGCAGATTGTCTGGAGGTTCGGTCTCTTCCCGATCTTTCGCCCCATCATTTGGCACAGCTGGACGCTTATATTGCGCAGCATTTCGAAGCGGTATGCGAGACAGGAGCGATGGCAGCCCTGCCTGTCGTCCGCATCGAACTGTTGAGGGAGGGGCCGATACAGGGAGTGACCACCGCTGGGGGCGAAGACGCCCCTCATGCTATAGCCGACGCAGCGCTGACGTGGTTGCGAAGTCACGCACCGGAATATGATCTGGAGGAGCTGTGCTCGAGGACCCACCTGCTGTACGTGGCGGAGCGCGGGTCGCTGCGGGACTGCGGCGAGCTGCCCGCCACCCGCGGCGACGCGCCCGAGCTGCAGGAGTACCGCCGCGAGGCCGCCCAGCGCGCCAAGCGCAGCCGCGACGCCGGGCCCGCCTCCGCCGCGCGGCCCCTGCCCGGCCTCGAGCTGGGCGCGCGCTGTGCCCGCCCCGCCTGCGCCGTGCTCGCCGCCAGGGCCGCTTCCGGGGGCTCGACGCGGGCGTTACTCGCCGTGCGGGGTAGGCTGGCGGCAGCACGCGTGTCGTGGCGGGACGTGGCCGCGGGCGGCGCCACCGGCACTCGAGGCGCGTTGGCCTCTGACACAGAACCGGATTCAGCAGAGAGGCGCGCCCACTTAGCGACCGGCCGCTGCGCTCACGGCATCGCGGTGCTAGACGGGCGTCTCGTGGTGTGCGGCGGCTACGACCGCGCGCGCGTGCTGCGGACCGCGGAACAGTACGACCCTTCCACCAACACGTGGTCAGCTCTGCCGGACATGCGGTGTGCTAGAGCTCGGTTCCCGGCTGCGGTCCTCAACCACACGGTGTACGCGGTGGGGGGCAGCGATGGACACACAGAACTGGACTCGGTCGGGGCTCTGCAGAACGGCTCGTGGCAGGCGAAGGCGAAGCTGCCCCTCGCGCTGTCGTACGCCGGAGCGGCGGTCGACCCTGGGGGAGAGAATCTGTACATCATCGGCGGCTGGGCCGGAGGGGTCAACCTGAAAAGAGTATTGAAGTATTCGGCTGCTGAAGACAAATGGACAGAGGCCCCTCCCCTCAACGCGGGTCGATCGCAATGCTCTGGAGTGTGGTGGGAGGGATCTTTGTGGGCACTGGGAGGCTGTGACGCATGGCACTGCTTGTCGTCCACTGAGACTCTGACCATAAATGGGGGCCAGTCGTGGAGCCCCGGTCCCCCCCTGCCGACAGCCCGGCGCTCCGTTGGGGGCTGCGTGTGGGGGTCGAGGCTCATCTCGGCGGGGGGCTCGGACGGGGCCGCCTCGCTGCGGAGGACCGACTGGCTGGAGACACGCGACGGTACTTGGAAAGCTGGGCCTAATATGAGGAAAGCCCGCGCTGGCGTGGGGCTGGCCGTGGTGGGAGGCGTGGTGTACGCGGTGGGAGGGTTCGACGGCAAGGAGTTCCTCTCGTGCGTGGAGTGCCTGTACTCGCCCGACGGGGAGTGGACCTCGCTGTGTGTGCCGCCCGCCAACATCAGGAGCATCGCTAACCATTCGGAGAAGAAAGAGAACGGCGTGCACTCGGATTGA

Protein

MRPQGDYRNGDGREEDSEGEESSALEDELSLYDPDAPARALSALNALRKSRQHYDAVLVAGGTEVAAHRAVLAAASPYLLEALSPAPVTTSPAPASAPVYRVEDVDADALRELVEYAYTGRVRVKDTLSARRLYRAAWRLRVESVRAHLADRLLKRLAPADCLEVRSLPDLSPHHLAQLDAYIAQHFEAVCETGAMAALPVVRIELLREGPIQGVTTAGGEDAPHAIADAALTWLRSHAPEYDLEELCSRTHLLYVAERGSLRDCGELPATRGDAPELQEYRREAAQRAKRSRDAGPASAARPLPGLELGARCARPACAVLAARAASGGSTRALLAVRGRLAAARVSWRDVAAGGATGTRGALASDTEPDSAERRAHLATGRCAHGIAVLDGRLVVCGGYDRARVLRTAEQYDPSTNTWSALPDMRCARARFPAAVLNHTVYAVGGSDGHTELDSVGALQNGSWQAKAKLPLALSYAGAAVDPGGENLYIIGGWAGGVNLKRVLKYSAAEDKWTEAPPLNAGRSQCSGVWWEGSLWALGGCDAWHCLSSTETLTINGGQSWSPGPPLPTARRSVGGCVWGSRLISAGGSDGAASLRRTDWLETRDGTWKAGPNMRKARAGVGLAVVGGVVYAVGGFDGKEFLSCVECLYSPDGEWTSLCVPPANIRSIANHSEKKENGVHSD

Uniprot

A0A2R5L6F1 A0A0V1JKI6 A0A0V1I742

EMBL

GGLE01000936 MBY05062.1 JYDV01000089 KRZ35455.1 JYDS01000291 KRZ17717.1 + More

Proteomes

UP000054826 UP000054805

Pfam

PF01344 Kelch_1 + More
PF00651 BTB

Interpro

IPR015915   Kelch-typ_b-propeller        + More
IPR011333   SKP1/BTB/POZ_sf
IPR017096   BTB-kelch_protein
IPR000210   BTB/POZ_dom
IPR006652   Kelch_1
IPR011043   Gal_Oxase/kelch_b-propeller

SUPFAM

SSF117281   SSF117281        + More
SSF54695   SSF54695
SSF50965   SSF50965

Gene 3D

2.120.10.80

ProteinModelPortal

A0A2R5L6F1 A0A0V1JKI6 A0A0V1I742

PDB

5YY8 E-value=2.10467e-33, Score=358

KEGG

101743889 K15046 influenza virus NS1A-binding protein | (RefSeq) influenza virus NS1A-binding protein homolog

GO

GO:0005515 GO:0032580 GO:0007264 GO:0008270 GO:0005524 GO:0006139 GO:0019205 GO:0043564 GO:0006418 GO:0003824

Length:

682

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.41602

Exp number, first 60 AAs:

0.02289

Total prob of N-in:

0.01508

outside

1 - 682

Pi

270.065475

Theta

19.891141

Tajima's D

-1.540254

CLR

147.702936

CSRT

0.0540472976351182

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics