Gene

KWMTBOMO11821

Annotation

PREDICTED:_chondroitin_sulfate_synthase_2_[Amyelois_transitella]

Location

Bomo_Chr20(+):1098007-1110741      View in EpiBrowser

Full name

Hexosyltransferase      

Location in the cell

Extracellular   Reliability : 1.11

CDS

ATGTTCTCGCGATGCCTGGTGTCTCAAGTAAAACATAACTCGTACTTTTTAATAGGCCTATTAATCGGTTTGTGGGTGTCTCTCGCTGTTATACCGTTGGATGAAGAGCCGGCGCCTTGTGTAGCGACTGTAGGCAGTGCCTCTCCAGTTCAGGATGAATTTGTGCCGCAGCGGGAGGAAAAACCAGCTGGTTCAGGACAGACGGCTGGGAGAAGCGTGCAACGACCTCGTTATTACAGTACTGAGCTGGGCATGAGAGGTTCCCTTCTCACTGGAATCCTGAGCTCGGAAGAAGCCCTCAAAGTCCAAGTGCCAGCTCTGAACCGAACAGCAGCAAGACTGCAGCCAGCCTTAAAATTCTTCATTACCGCCAGTGCAATGAGCACTGTACCTGGGCTAGCTAATGTTGTTGGCTTCACAGATACTAGGGAAATGCTAAAACCATTTCATGCCTTGAAGTACTTAGCAGATAATTATTTAGAGGAGTACGATTTCTTCTTCATTGTATCCGACACAGCCTTTGTGAATGCAAGACGGTTGACCCAGCTGGTCTCTCAGTTGTCTGTCAGCCAAGATGTGTACATGGGGAGGGTAGCTGATGATGAAAGTCATTATTGTTCTTTAGACAATGGAATAATCCTTTCTAACTCTGTGCTCCGCGCTATCCACAGTGAACTCGACTGGTGTGTACGCAATTCATATTCTCCTCACCACTACGAGAATATAGGTCGTTGTGTGTTACACTCTGCTCATTTGTCTTGCAACCCTGACGTACAGGGTGAACACTACTCATCAGTAGTTATCGAAAATGATCAACTACCATTAACTGAGTCTTTGGCTGATGCTGTAACAGTGTATCCCATCATGGACACTCACAGGTTCTACGAGATACACGCTTACATATCACGGGTGTTTTTGGAACGCGACCACGAGGAGGTGCTGAAACTACGCAGCTACATGTGGCACAACTCCGCGCGCCACCCCCCCGGGTACAGGAACAGCACGTGGCCCGCCGGCCTCAGGGACGATCCCGGACTGGCCAGACCTTTACCGGGGAACAGGTTCGACCACCTCCGCTGGACGGCAATTAACGGGACCCACGCGTTCTTTCCTGACGACCACCACAATGTATTACCGATCACCGGAGCTTACAGAGAAGCCTTGGATCTGGTGCTCACCCAAGTGAGGGCGTGGTCGCTGCACCGCTGGCCCGAGGCGCTGGACGTGCAGCTGGTGGAGGGGGCCTGGAAGTGGGAGCCGGCCGTCGCGCTGCGGTACCGCCTCCTGCTCCGCCTCACCGCCAAGGAGGACAAGGACACGCACATGAGCAGGCTGGTGGAGGCGGTGCGTCCGCTGGGCGCGGCGCGGCTGGTGCCGGTGCGCTACGTGACGGAGAGCGCGCGGCTCAGCGCCGTGCTGGCGGCGCCGCACACCGCGCGCCACGCCGCCGACCTCGCCGCCTTCCTGCAGCGGTACGAGGCGGTCTGCCTTAACCAGGACAAGAACACCGCGCTCCTGCTGGTGATAGTGAAGCAGCCTTCCCAGCCTTCCGTCGGCAACACCACTGAGGTGGACCTCATGAAGGAGAACAAGGAGACGGTGGCCGCGCTGAAGTCCCGGCACAAGGACGCCCAGATCGAGGTGGTCGAGACGAGCCTGGAGTCTCCCAGCCACGAGCACGCCAGCGAGGTGGAGCTGCTGCAGGAGGCGCAGCGGGCCGCGCTCGCCCTCGCCCTGCAGCGGGTACCCCGGGACAGCCTGGTGCTCCTCGCCGTGCCGCACATCGACTTCAACCAAGACTTCTTGAATCGGGTCCGCATGAACACGATATCCGGCGAGCAGTGGTACCTGCCCAGCGCGTTCTCCCGCTACGCGCAGTACGAGCACCCCGCCTTCGTGACGCCCACCGGCGCCAAGCCGCAGTCCAACACCGGCCGCTTCAACGTGCACCTCAGCCTCGTCTCCTCCTTCTACAGGAGCGACTACGACTCGGCGGTGGCGGAGTGGCCCGGGCCGGGGGGGGCGGACCCCGCGGCGGTGCTGGTCCGCAGCGGGCTGCGCTGCGTGCGCGCACCCGAGCCGGGGCTGGTGTACGCGTCGCGGGGGGCGCCGTGCGGGGGCGCGGGGGACGCGGCGTGCGTGTCGCGGCTGGTCACGCAGCTGCACACGCTGGACCTCGGCGCCAAGCACTCGCTCGCACAGCTGCTGCTCGAAACTCAAGCCGAGCTGGACCAGTAG

Protein

MFSRCLVSQVKHNSYFLIGLLIGLWVSLAVIPLDEEPAPCVATVGSASPVQDEFVPQREEKPAGSGQTAGRSVQRPRYYSTELGMRGSLLTGILSSEEALKVQVPALNRTAARLQPALKFFITASAMSTVPGLANVVGFTDTREMLKPFHALKYLADNYLEEYDFFFIVSDTAFVNARRLTQLVSQLSVSQDVYMGRVADDESHYCSLDNGIILSNSVLRAIHSELDWCVRNSYSPHHYENIGRCVLHSAHLSCNPDVQGEHYSSVVIENDQLPLTESLADAVTVYPIMDTHRFYEIHAYISRVFLERDHEEVLKLRSYMWHNSARHPPGYRNSTWPAGLRDDPGLARPLPGNRFDHLRWTAINGTHAFFPDDHHNVLPITGAYREALDLVLTQVRAWSLHRWPEALDVQLVEGAWKWEPAVALRYRLLLRLTAKEDKDTHMSRLVEAVRPLGAARLVPVRYVTESARLSAVLAAPHTARHAADLAAFLQRYEAVCLNQDKNTALLLVIVKQPSQPSVGNTTEVDLMKENKETVAALKSRHKDAQIEVVETSLESPSHEHASEVELLQEAQRAALALALQRVPRDSLVLLAVPHIDFNQDFLNRVRMNTISGEQWYLPSAFSRYAQYEHPAFVTPTGAKPQSNTGRFNVHLSLVSSFYRSDYDSAVAEWPGPGGADPAAVLVRSGLRCVRAPEPGLVYASRGAPCGGAGDAACVSRLVTQLHTLDLGAKHSLAQLLLETQAELDQ

Similarity

Belongs to the chondroitin N-acetylgalactosaminyltransferase family.

Feature

chain  Hexosyltransferase

Uniprot

A0A2A4J776   A0A212EXY8   A0A2P8YIB7   K7IVJ9   A0A232EF39   A0A1S3CZ03   + More
E2C7H7   A0A1B6C963   E2AAJ9   A0A3L8DY01   A0A026WLV0   A0A067QR13   A0A2J7Q9V5   A0A2J7Q9T6   A0A1S4KFX2   E9JDC0   J9K2F5   B0XG38   Q16SL4   A0A1S4FQP4   A0A158NZ16   A0A1Y1N8D2   A0A2R7VUX5   A0A2H8TN53   A0A139WGD2   A0A2S2QQV0   A0A2S2P464   A0A2A3EN76   A0A182FMM8   A0A182SW67   F4WBZ6   U5ER64   A0A0V0G6G6   A0A088A1X0   A0A151WQA1   A0A1L8E333   A0A1L8E3H9   A0A2J7Q9T2   A0A182H4Z9   A0A224XL69   A0A2M4BDU7   A0A195BMF5   A0A336K0T1   A0A2M4BDZ1   A0A2M4BDU6   A0A195FSY4   A0A2M3Z6S2   T1HXA0   A0A2M4ADF2   A0A0K8WM52   A0A151J2P1   A0A0C9QEI3   A0A182IYS0   A0A1J1IVP5   A0A0M3QZ51   A0A1W4VKV0   A0A146L6G1   A0A182W611   A0A1W4V7R0   A0A0A9YFR8   Q7PMP8   B3MS44   A0A0P4W3X9   A0A084VGQ1   A0A0L7QUQ3   Q9VYH2   A0A1W4VK35   Q29IB5   A0A1B6FWX5   A0A1B6L696   A0A182MHM8   A0A2J7Q9V0   B4M726   A0A1B0GL08   A0A087UVX6   A0A1B6J300   A0A1J1IXP3   N6TR11   A0A2P6K3S7   U4UIC4   V4AXE2   A0A1S3IB52   A0A210PSJ7   K1QTT0   S4RPI0   R0KYT2   R7TAR8   A0A087QXS9   A0A2I0U248   A0A2K6GEP2   A0A131XVR8   T1J8E4   B7Q2Y7  

EC Number

2.4.1.-

Pubmed

22118469    29403074    20075255    28648823    20798317    30249741    + More
24508170    24845553    21282665    17510324    21347285    28004739    18362917    19820115    21719571    26483478    26823975    25401762    12364791    14747013    17210077    17994087    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    23537049    23254933    28812685    22992520   

EMBL

NWSH01002628    PCG67811.1    AGBW02011687    OWR46304.1    PYGN01000578    PSN43934.1    + More
NNAY01005141    OXU16953.1    GL453369    EFN76101.1    GEDC01027429    JAS09869.1    GL438128    EFN69546.1    QOIP01000003    RLU24985.1    KK107161    EZA56601.1    KK853123    KDR11049.1    NEVH01016344    PNF25349.1    PNF25348.1    GL771866    EFZ09144.1    ABLF02029482    DS232985    EDS27213.1    CH477672    EAT37450.1    ADTU01004505    GEZM01010916    JAV93728.1    KK854101    PTY11294.1    GFXV01002903    MBW14708.1    KQ971348    KYB26915.1    GGMS01010881    MBY80084.1    GGMR01011389    MBY24008.1    KZ288215    PBC32656.1    GL888067    EGI68285.1    GANO01002946    JAB56925.1    GECL01002836    JAP03288.1    KQ982837    KYQ50069.1    GFDF01000946    JAV13138.1    GFDF01000890    JAV13194.1    PNF25351.1    JXUM01110504    JXUM01110505    JXUM01110506    KQ565419    KXJ71000.1    GFTR01007657    JAW08769.1    GGFJ01002074    MBW51215.1    KQ976444    KYM86211.1    UFQS01000015    UFQT01000015    SSW97392.1    SSX17778.1    GGFJ01002072    MBW51213.1    GGFJ01002073    MBW51214.1    KQ981276    KYN43558.1    GGFM01003471    MBW24222.1    ACPB03006224    GGFK01005327    MBW38648.1    GDHF01000354    JAI51960.1    KQ980353    KYN16354.1    GBYB01001694    GBYB01007979    JAG71461.1    JAG77746.1    CVRI01000063    CRL04339.1    CP012528    ALC48759.1    GDHC01014656    JAQ03973.1    GBHO01011692    GBHO01011691    JAG31912.1    JAG31913.1    AAAB01008973    EAA13433.5    CH902622    EDV34599.2    GDRN01093994    JAI59779.1    ATLV01013047    KE524836    KFB37145.1    KQ414735    KOC62206.1    AE014298    AAF48225.2    CH379063    EAL32738.3    GECZ01015077    JAS54692.1    GEBQ01020953    JAT19024.1    AXCM01001949    PNF25352.1    CH940653    EDW62593.2    AJWK01034037    AJWK01034038    AJWK01034039    KK121911    KFM81515.1    GECU01014164    JAS93542.1    CRL04340.1    APGK01055312    KB741261    ENN71665.1    MWRG01032027    PRD20985.1    KB632310    ERL92113.1    KB200314    ESP02248.1    NEDP02005525    OWF39426.1    JH816951    EKC40242.1    KB744814    EOA94349.1    AMQN01003053    KB310836    ELT90607.1    KL225993    KFM06033.1    KZ506339    PKU40099.1    GEFM01005491    JAP70305.1    JH431954    ABJB010277392    DS847090    EEC13209.1   

Proteomes

UP000218220    UP000007151    UP000245037    UP000002358    UP000215335    UP000079169    + More
UP000008237    UP000000311    UP000279307    UP000053097    UP000027135    UP000235965    UP000007819    UP000002320    UP000008820    UP000005205    UP000007266    UP000242457    UP000069272    UP000075901    UP000007755    UP000005203    UP000075809    UP000069940    UP000249989    UP000078540    UP000078541    UP000015103    UP000078492    UP000075880    UP000183832    UP000092553    UP000192221    UP000075920    UP000007062    UP000007801    UP000030765    UP000053825    UP000000803    UP000001819    UP000075883    UP000008792    UP000092461    UP000054359    UP000019118    UP000030742    UP000030746    UP000085678    UP000242188    UP000005408    UP000245300    UP000014760    UP000053286    UP000233160    UP000001555   

PRIDE

Q9VYH2   

Pfam

PF05679   CHGN        + More
PF02434   Fringe
PF09507   CDC27

Interpro

IPR008428   Chond_GalNAc        + More
IPR003378   Fringe-like       
IPR041913   POLD3_sf       
IPR019038   POLD3       

Gene 3D

1.10.10.1300    

ProteinModelPortal

A0A2A4J776   A0A212EXY8   A0A2P8YIB7   K7IVJ9   A0A232EF39   A0A1S3CZ03   + More
E2C7H7   A0A1B6C963   E2AAJ9   A0A3L8DY01   A0A026WLV0   A0A067QR13   A0A2J7Q9V5   A0A2J7Q9T6   A0A1S4KFX2   E9JDC0   J9K2F5   B0XG38   Q16SL4   A0A1S4FQP4   A0A158NZ16   A0A1Y1N8D2   A0A2R7VUX5   A0A2H8TN53   A0A139WGD2   A0A2S2QQV0   A0A2S2P464   A0A2A3EN76   A0A182FMM8   A0A182SW67   F4WBZ6   U5ER64   A0A0V0G6G6   A0A088A1X0   A0A151WQA1   A0A1L8E333   A0A1L8E3H9   A0A2J7Q9T2   A0A182H4Z9   A0A224XL69   A0A2M4BDU7   A0A195BMF5   A0A336K0T1   A0A2M4BDZ1   A0A2M4BDU6   A0A195FSY4   A0A2M3Z6S2   T1HXA0   A0A2M4ADF2   A0A0K8WM52   A0A151J2P1   A0A0C9QEI3   A0A182IYS0   A0A1J1IVP5   A0A0M3QZ51   A0A1W4VKV0   A0A146L6G1   A0A182W611   A0A1W4V7R0   A0A0A9YFR8   Q7PMP8   B3MS44   A0A0P4W3X9   A0A084VGQ1   A0A0L7QUQ3   Q9VYH2   A0A1W4VK35   Q29IB5   A0A1B6FWX5   A0A1B6L696   A0A182MHM8   A0A2J7Q9V0   B4M726   A0A1B0GL08   A0A087UVX6   A0A1B6J300   A0A1J1IXP3   N6TR11   A0A2P6K3S7   U4UIC4   V4AXE2   A0A1S3IB52   A0A210PSJ7   K1QTT0   S4RPI0   R0KYT2   R7TAR8   A0A087QXS9   A0A2I0U248   A0A2K6GEP2   A0A131XVR8   T1J8E4   B7Q2Y7  

KEGG

101741187    K00747 chondroitin polymerizing factor [EC:2.4.1.175 2.4.1.226] | (RefSeq) chondroitin sulfate synth

PATHWAY

00532    Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate - Bombyx mori (domestic silk
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008376   GO:0032580   GO:0016021   GO:0016740   GO:0005634   GO:0006260   GO:0030206   GO:0007264   GO:0008270   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

745

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.49058

Exp number, first 60 AAs:

19.3716

Total prob of N-in:

0.89164

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  32

outside

33  -  745

 

 

Pi

177.195445

Theta

175.736613

Tajima's D

-1.412697

CLR

14.038324

CSRT

0.0747962601869906

Interpretation

Uncertain