Silkworm Genome Informatics Database

Gene

KWMTBOMO11813

Pre Gene Modal

BGIBMGA013664

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr20(-):604445-628653 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.275 PlasmaMembrane Reliability : 1.465

CDS

ATGAAGCTCGGTCGCGCTCCCGATTCCGTTCCCGTCACGAGAACTGTGGTGGATTGGCACACGCTGGGCATCAGCCTGGCTGAATCTGATCCACCATCGCTCCCGTTTAACCCGGACTCTATCCCGTCTCCTCAGGATACCGCTGAAGCCATAGACATCTTAACGTCACACATCACCTCGACATTAGATAGGTCATCGAAACAAGTTGTAGCGGAGGACTTCCTTCACCGCTTCAAATTGTCCGACGATATTAGGGAACTTCTTAGAGCTAAGAACGCCTCGATACGCGCCTACGACAGGTATCCTACCGCGGAAAATCGTATTCGAATGCGTGCCCTACAACGCGACGTAAAGTCTCGCATCGCCGAAGTCCGAGATGCCAGATGGTCTGATTTCTTAGAAGGACTCGCGCCCTCCCAAAGGTCTTACTACCGCTTAGCTCGTACACTCAAATCGGATACGGTAGTAACTATGCCCCCCCTCGTAGGCCCCTCAGGCCGACTCGCGGCGTTCGATGATGACGAAAAAGCAGAGCTGCTGGCCGATACATTGCAAACCCAGTGCACGCCCAGCACTCAATCCGTGGACCCTGTTCATGTAGAATTAGTAGACAGTGAGGTAGAACGCAGAGCCTCCTTGCCACCCTCTGATGCGTTACCACCCGTCACCCCGATGGAAGTTAAAGACTTGATCAAAGACCTACGTCCTCGCAAGGCTCCCGGTTCCGACGGTATATCCAACCGCGTTATTAAACTTCTACCCGTCCAACTCATCGTGATGTTGGCATCTATTTTCAATGCCGCTATGGCGAACTGTATCTTTCCCGCGGTGTGGAAAGAAGCGGACGTTATCGGCATACATAAACCCGGTAAACCAAAAAATGATCCGACGAGCTACCGCCCGATTAGCCTCCTCATGTCTCTAGGCAAACTGTATGAGCGTCTGCTCTACAAACGCCTCAGAGACTTCGTCTCATCCAAGGGCATTCTTATCGATGAACAATTCGGATTCCGTACAAATCACTCATGCGTTCAACAGGTGCACCGCCTCACGGAGCACATTCTTGTGGGGCTTAATCGACCAAAACCGTTATACACGGGAGCTCTCTTCTTCGACGTCGCAAAAGCGTTCGACAAAGTCTGGCACAATGGTTTGATTTTCAAACTATTCAACATGGGCGTGCCGGATAGTCTCGTGCTCATCATACGGGACTTCTTGTCGAACCGCTCTTTTCGATATCGAGTCGAGGGAACCCGCTCCTCCCCACGACCTCTCACAGCTGGAGTCCCGCAAGGCTCTGTCCTCTCACCCCTCCTATTTAGCTTATTCGTCAACGATATTCCCCGGTCGCCGCCGACCCATTTAGCTTTATTCGCCGACGACACGACTGTTTACTATTCTAGTAGAAATAAGTCCCTAATCGCGAAGAAGCTTCAGAGCGCAGCCCTAGCCCTAGGACAGTGGTTCCGAAAATGGCGCATAGACATCAACCCAGCGAAAAGTACTGCGGTGCTATTTCAGAGGGGAAGCTCCACACGGATTTCCTCCCGGATTAGGAGGAGGAATCTCACACCCCCGATTACTCTCTTTAGACAACCCATACCCTGGGCCAGGAAGGTCAAGTACCTGGGCGTTACCCTGGATGCATCGATGACATTCCGCCCGCATATAAAATCAGTCCGTGACCGTGCCGCGTTTATTCTCGGTAGACTCTACCCCATGATCTGTAAGCGGAGTAAAATGTCCCTTCGGAACAAGGTGACACTTTACAAAACTTGCATAAGGCCCGTCATGACTTACGCGAGTGTGGTGTTCGCTCACGCGGCCCGCACACACATAGACACCCTCCAATCCCTACAATCCCGCTTTTGCAGGTTAGCTGTCGGGGCTCCGTGGTTCGTGAGGAACGTTGACCTACACGACGACCTGGGCCTCGAATCAATTCGGAAATACATGAAGTCAGCGTCGGAACGATACTTCGATAAGGCTATGCGTCATGATAATCGCCTTATCGTTGCCGCCGCTGACTACTCCCCGAATCCTGATCATGCAGGAGCCAGTCACCGTCGACGCCCTAGACACGTCCTTACGGATCCATCAGATCCAATAACCTTTGCATTAGATGCCTTCAGCTCTAATACTAGGGGCAGGCTTAGGGACCCCGTCTTCGTGCCGGATGAAGTCGATTTCACGCGCCGCCAGCCAGTCTTGTATGCTCTTCGCTCTATGAGCTGGCGCCGAATTTTGTTGGAATACCCAGTGCCTGTTATTGAACATGGTATGAGAAACAGGTTCCACAAGAGAGAGTTAAACGCTGTGGACTTCAAGGTGTCTCAAGACTTGAAGTTCGTCTTGCTGATATCTGATGTGAGACCAGGCTGGAGGCATGGCCGTCTGGCGAGGTACCACGTCTATGACGTGATAAATAGGAATAAAATCCCCATATCGCCAGTGGAAGACGATCGTTCAGCGCCGCTGCTGCAGCACGCAGAGTGGTCCCCGGTCGGCTCCAGCTTAGTATTTGTACACGACAACGACATTTACTACAAGCCAAGAGTTTTGAAAACCCTGATTTGCAGGATCACTAAAGACGGTGTCCCGGGAGTAATATTCAATGGAGTACCAGATTTCTTATACGAGACCGAAGTGTTGCGGTTAGACCGAGCATTATGGTTCAGTCCGGACGGTCAGACCCTCATGTTCGCGACGTACAACAACTCCCAGGTCCAAGAACACAAATACCCGTGGTATGGTCTGGACGACCCCGAACCGCCCGCTTATCCCATAATTAAATCGGTCAGGTATCCCAAGGTGAACACCAACAACCCTGAAGTGACAATATACGTTGTCAGTTTAAAAACGCCGAAATATCTGTTCCCTCATGCGATCCAGTTTTCATCACAAGTGGACAAGACTTGGTACGTGCGCTGGACAGAGTGGATGTCGGAGAAGCAGATAGCAGTTCTGCTCCTCAACCGGGCTCAAAATGTTTCCATCATCAGCGTTTGCAGTGCAGCTCAATACAATTGTCAAGATATCTACCGCGACGAGACAGACGGCTCGCGCTGGTCAGGCCTCGGGGCTGAACCGGTGGAGGAAGACTGCGGGTGGTGCTTCGGACACGCCCTCGTCGGTTCTCGGTCGGGGATCTACACTACATCCCCCGTAGCAGACACAACTGGGATCTGGAGACATGCCGTCAAAGTGTCAATAGATGGAAGAACCCCTCTAACACAGGGCAGCTTTGAGATCACGCAGCTGCTAGGATGGGATGAGAAAAGGAAATTCTTGTACGTGGTGGGCACGGGGGTGGACAAGCCGGGGGAGAGACATTTGTACCGCGTCAGTGGGATCGAGCCGGGCGTGTGGACACCACCACCGGTCTGCCTCACCTGCTCAGTGTCACCAGCACCACCTACTACCACCGAAGCAGACCCGGACGATCTGGAATACGAGAACGGGACATCGTCCTTGCCGGCGTGGCCGTCCTCGACAGTACTCCCGCACGTTGCTGATGAGAACGACTCGCTGCCCGGCGAGTGTCTGTACAACAGGATCATGTTCAGCAAGAACTTCTCATATTACGTACAGGAGTGCCTGGGTCCCGGTCCTCCCGTGACGTTCCTGTGCACGCACTGGGGGGAGCGCCGCGCCGTGCTGTGGGACGGCTGGCCACTCAGACACAAGTTTGGACAACTGGCTCATCCGCAAGTCAAAGTGTTCAGGGTCGAGGTACAAGCAGAAAGGGAAGCCCGGGTCAGACTGCTACTGCCACCAGGGTTTAAGGAGACGGATGACCTGCCGTTACCGCTAGTGCTGCACGTGTCCGCTGAGCCCGGAGGTCAGCTGGTGACAGAGCGCTGGTCCCCGGGCTGGGGCTGGTACCTCGCAGCCACCAGGAACTTTATCGTCGCGCAGATCGACGCGCGCGGGTCCGGTGGACAGGGTGAGGAGCTGAGGACGGAGATATACCACAAACTGATGTCCATAGACGTGGAAGATCAAATTGCCGTCCTGTCGTATCTCCGCGACAACCTGAAGATGGTGGACGGTAGCCGAGTGGGGGTGTGGGGGCGCGGGTACGGCGGCGGTGCGGCGGCCGCGCTCGCCGCAGATGACGCCCGCAACGTGACGCGCTGCCTGGCCGCCGTGGCGCCACTGACCGACCTCAGACACCACAGTGAGTAG

Protein

MKLGRAPDSVPVTRTVVDWHTLGISLAESDPPSLPFNPDSIPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRAYDRYPTAENRIRMRALQRDVKSRIAEVRDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSLGKLYERLLYKRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSVLSPLLFSLFVNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTRISSRIRRRNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITFALDAFSSNTRGRLRDPVFVPDEVDFTRRQPVLYALRSMSWRRILLEYPVPVIEHGMRNRFHKRELNAVDFKVSQDLKFVLLISDVRPGWRHGRLARYHVYDVINRNKIPISPVEDDRSAPLLQHAEWSPVGSSLVFVHDNDIYYKPRVLKTLICRITKDGVPGVIFNGVPDFLYETEVLRLDRALWFSPDGQTLMFATYNNSQVQEHKYPWYGLDDPEPPAYPIIKSVRYPKVNTNNPEVTIYVVSLKTPKYLFPHAIQFSSQVDKTWYVRWTEWMSEKQIAVLLLNRAQNVSIISVCSAAQYNCQDIYRDETDGSRWSGLGAEPVEEDCGWCFGHALVGSRSGIYTTSPVADTTGIWRHAVKVSIDGRTPLTQGSFEITQLLGWDEKRKFLYVVGTGVDKPGERHLYRVSGIEPGVWTPPPVCLTCSVSPAPPTTTEADPDDLEYENGTSSLPAWPSSTVLPHVADENDSLPGECLYNRIMFSKNFSYYVQECLGPGPPVTFLCTHWGERRAVLWDGWPLRHKFGQLAHPQVKVFRVEVQAEREARVRLLLPPGFKETDDLPLPLVLHVSAEPGGQLVTERWSPGWGWYLAATRNFIVAQIDARGSGGQGEELRTEIYHKLMSIDVEDQIAVLSYLRDNLKMVDGSRVGVWGRGYGGGAAAALAADDARNVTRCLAAVAPLTDLRHHSE

Uniprot

NA

ProteinModelPortal

NA

PDB

1Z68 E-value=9.51926e-55, Score=545

KEGG

101742684 K23014 inactive dipeptidyl peptidase 10 | (RefSeq) inactive dipeptidyl peptidase 10

GO

GO:0006508 GO:0008236 GO:0016820 GO:0008270 GO:0005524 GO:0006139 GO:0019205 GO:0043564 GO:0006418 GO:0003824

Length:

1395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.59051000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04054

outside

1 - 1395

Pi

173.999935

Theta

151.147804

Tajima's D

0.59545

CLR

0.143587

CSRT

0.542472876356182

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree