Gene

KWMTBOMO11807

Pre Gene Modal

BGIBMGA013669

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_MYLIP_[Papilio_polytes]

Location

Bomo_Chr20(-):512846-515873      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.059 Nuclear   Reliability : 1.769

CDS

ATGTCGTACGTGACTAGCGAAGGCAACGAGGCCACACTCCACGTGAAGATGGCCACTTCGGGACAAGCGGCGGCGCTCTACCGGGCCGTGACCGAGAAGCACGCCTTCTACTGCTGCGAAACTGTTAGAACTGACGTCACCGAACAGTTTATAAGAGATCTGAAGGGCACAATAGCATCGATATTCAAGGACTCCACGACGCTGGGCCGCCGCTACGTGTTCGACATCCGGCGCACGTGCCGCGAGGTGCACGACCGCGCGCGCCGCGCCGCACACCGCACCGCCCCGCGCGCCGCACCGCCCGCCGCGCCCCCCGCCGCGCCGCCCGCACGGGTGGGACACGAGAAAACCCGTTCAAGATCGAGCAGCAGCAGCAGCAGTAGCGGCGGCGGCGGTGAGGCGCTGGCGTGTCGCGTGTGCATGGACGAGCCCATCGACTCGCTGTTCCTGCCGTGTCGACACGTGGTCTGCTGCGGACAGTGCGCTCCTAGATGCAACCGCTGTCCGTTGTGCAGAGGCGAAATCGAGAAACTGATGCACATCTTCCTCCCGATGGAGTACCAAAAGAACCCCGGTCTGATCGTCAAATGA

Protein

MSYVTSEGNEATLHVKMATSGQAAALYRAVTEKHAFYCCETVRTDVTEQFIRDLKGTIASIFKDSTTLGRRYVFDIRRTCREVHDRARRAAHRTAPRAAPPAAPPAAPPARVGHEKTRSRSSSSSSSSGGGGEALACRVCMDEPIDSLFLPCRHVVCCGQCAPRCNRCPLCRGEIEKLMHIFLPMEYQKNPGLIVK

Uniprot

H9JVV6   A0A194Q5C7   A0A2H1VR87   A0A2A4J080   A0A212F4X8   A0A0L7K3F8   + More
A0A0L7KY68   A0A0L7L8E2   A0A2J7PED5   A0A1B6DGG8   A0A067R1Y1   D6WQU2   A0A1B6C8A5   U5EYX6   F4WSZ9   A0A0T6BAH7   V5GIY3   U4UGB8   V9IIM3   U4TYM9   A0A0L7RDS0   A0A1Y1KPM9   U4TVU5   A0A2S2PLL4   A0A0A9W3Q3   N6U0J1   E2A662   A0A0J7L1E0   A0A087U4M6   A0A195AYJ3   A0A151WHN3   A0A3L8DV76   A0A026WMJ1   A0A154PD19   A0A158NYI2   A0A088AMZ3   A0A2A3EE26   A0A151IT59   A0A195F6W3   A0A0P4VRC1   R4G4J7   J9JUS3   A0A1Q3F800   A0A2S2QX12   A0A2H8TRQ8   A0A1Q3F7S4   A0A1Q3F7W9   A0A069DU28   A0A1B6JGR4   A0A1L8DTG8   A0A1L8DTC3   A0A224XQJ0   A0A0V0GEK0   A0A2R7WAM1   A0A023EW89   A0A146BIV4   A0A1B0CJZ8   Q17NT7   B0WIZ0   A0A0P5C606   A0A182HFD4   A0A0P5ELR8   T1DQB7   A0A182JDR7   A0A182WSH1   Q380J4   A0A182HLC2   A0A195CW48   A0A084VT78   A0A182UYG6   A0A182NS50   A0A182TSI9   A0A182JWT6   A0A182Q5N7   A0A023F934   A0A2M4AC89   A0A0P4Z9H4   A0A182FA70   A0A2M3Z3B6   A0A182YAK7   A0A2M3Z3T5   E9G5D2   A0A162NJ05   A0A182PGP6   A0A2M4A921   A0A2M4A8Z7   A0A0N8D5D7   A0A0P5EZK2   A0A0P5GIS2   A0A0P5IT46   A0A0P5HBR2   A0A0P5M0T7   A0A0P5QZV9   A0A182R628   A0A2M3ZG34   A0A0P5PTC9   A0A2M4BHZ9  

Pubmed

19121390    26354079    22118469    26227816    24845553    18362917    + More
19820115    21719571    23537049    28004739    25401762    26823975    20798317    30249741    24508170    21347285    27129103    26334808    24945155    27045774    17510324    26483478    12364791    14747013    17210077    24438588    25474469    25244985    21292972   

EMBL

BABH01038709    BABH01038710    KQ459460    KPJ00748.1    ODYU01003960    SOQ43361.1    + More
NWSH01004121    PCG65475.1    AGBW02010297    OWR48780.1    JTDY01014448    KOB52027.1    JTDY01004563    KOB68006.1    JTDY01002265    KOB71772.1    NEVH01026103    PNF14672.1    GEDC01012509    JAS24789.1    KK853083    KDR11653.1    KQ971354    EFA06019.1    GEDC01027570    JAS09728.1    GANO01000059    JAB59812.1    GL888331    EGI62612.1    LJIG01009030    KRT83895.1    GALX01004457    JAB64009.1    KB630834    KB632281    ERL83894.1    ERL91383.1    JR049511    AEY60988.1    KB630106    ERL83396.1    KQ414613    KOC69003.1    GEZM01084036    JAV60817.1    KB631740    ERL85704.1    GGMR01017710    MBY30329.1    GBHO01044863    GBHO01044860    GBHO01040537    GBRD01002335    GDHC01006070    JAF98740.1    JAF98743.1    JAG03067.1    JAG63486.1    JAQ12559.1    APGK01054170    KB741247    ENN72057.1    GL437108    EFN71121.1    LBMM01001380    KMQ96413.1    KK118137    KFM72315.1    KQ976701    KYM77303.1    KQ983114    KYQ47342.1    QOIP01000003    RLU24327.1    KK107151    EZA57292.1    KQ434864    KZC09100.1    ADTU01003896    ADTU01003897    ADTU01003898    ADTU01003899    ADTU01003900    ADTU01003901    ADTU01003902    KZ288269    PBC30005.1    KQ981029    KYN10194.1    KQ981768    KYN35932.1    GDKW01001494    JAI55101.1    ACPB03005125    ACPB03005126    GAHY01001300    JAA76210.1    ABLF02014965    GFDL01011345    JAV23700.1    GGMS01013072    MBY82275.1    GFXV01004766    MBW16571.1    GFDL01011421    JAV23624.1    GFDL01011426    JAV23619.1    GBGD01001618    JAC87271.1    GECU01009306    JAS98400.1    GFDF01004387    JAV09697.1    GFDF01004386    JAV09698.1    GFTR01006013    JAW10413.1    GECL01000365    JAP05759.1    KK854489    PTY16281.1    GAPW01000954    JAC12644.1    KU985051    AMW92652.1    AJWK01015556    AJWK01015557    AJWK01015558    AJWK01015559    AJWK01015560    CH477196    EAT48387.1    DS231954    EDS28851.1    GDIP01179740    GDIQ01090705    JAJ43662.1    JAN04032.1    JXUM01037606    JXUM01037607    KQ561134    KXJ79613.1    GDIP01146295    GDIQ01223604    JAJ77107.1    JAK28121.1    GAMD01001255    JAB00336.1    AAAB01008987    EAL38569.4    APCN01000890    KQ977220    KYN04855.1    ATLV01016270    ATLV01016271    KE525074    KFB41172.1    AXCN02000266    GBBI01000726    JAC17986.1    GGFK01005076    MBW38397.1    GDIP01231141    GDIP01220036    GDIQ01090706    JAJ03366.1    JAN04031.1    GGFM01002268    MBW23019.1    GGFM01002426    MBW23177.1    GL732532    EFX85651.1    LRGB01000568    KZS18028.1    GGFK01003948    MBW37269.1    GGFK01003953    MBW37274.1    GDIP01067151    JAM36564.1    GDIQ01267855    JAJ83869.1    GDIQ01239945    JAK11780.1    GDIQ01210693    JAK41032.1    GDIQ01230145    JAK21580.1    GDIQ01162680    JAK89045.1    GDIQ01127586    GDIP01020421    JAL24140.1    JAM83294.1    GGFM01006776    MBW27527.1    GDIQ01125985    JAL25741.1    GGFJ01003548    MBW52689.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000037510    UP000235965    + More
UP000027135    UP000007266    UP000007755    UP000030742    UP000053825    UP000019118    UP000000311    UP000036403    UP000054359    UP000078540    UP000075809    UP000279307    UP000053097    UP000076502    UP000005205    UP000005203    UP000242457    UP000078492    UP000078541    UP000015103    UP000007819    UP000092461    UP000008820    UP000002320    UP000069940    UP000249989    UP000075880    UP000076407    UP000007062    UP000075840    UP000078542    UP000030765    UP000075903    UP000075884    UP000075902    UP000075881    UP000075886    UP000069272    UP000076408    UP000000305    UP000076858    UP000075885    UP000075900   

PRIDE

H9JVV6   

Pfam

PF00373   FERM_M        + More
PF09379   FERM_N
PF09380   FERM_C

Interpro

IPR001841   Znf_RING        + More
IPR000299   FERM_domain       
IPR019748   FERM_central       
IPR013083   Znf_RING/FYVE/PHD       
IPR035963   FERM_2       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR018980   FERM_PH-like_C       
IPR029071   Ubiquitin-like_domsf       
IPR018979   FERM_N       
IPR011993   PH-like_dom_sf       
IPR041790   MYLIP_FERM_C       
IPR019747   FERM_CS       

SUPFAM

SSF47031   SSF47031        + More
SSF54236   SSF54236       

Gene 3D

1.20.80.10     3.30.40.10     2.30.29.30    

CDD

cd14473  FERM_B-lobe
cd13195  FERM_C_MYLIP_IDOL

ProteinModelPortal

H9JVV6   A0A194Q5C7   A0A2H1VR87   A0A2A4J080   A0A212F4X8   A0A0L7K3F8   + More
A0A0L7KY68   A0A0L7L8E2   A0A2J7PED5   A0A1B6DGG8   A0A067R1Y1   D6WQU2   A0A1B6C8A5   U5EYX6   F4WSZ9   A0A0T6BAH7   V5GIY3   U4UGB8   V9IIM3   U4TYM9   A0A0L7RDS0   A0A1Y1KPM9   U4TVU5   A0A2S2PLL4   A0A0A9W3Q3   N6U0J1   E2A662   A0A0J7L1E0   A0A087U4M6   A0A195AYJ3   A0A151WHN3   A0A3L8DV76   A0A026WMJ1   A0A154PD19   A0A158NYI2   A0A088AMZ3   A0A2A3EE26   A0A151IT59   A0A195F6W3   A0A0P4VRC1   R4G4J7   J9JUS3   A0A1Q3F800   A0A2S2QX12   A0A2H8TRQ8   A0A1Q3F7S4   A0A1Q3F7W9   A0A069DU28   A0A1B6JGR4   A0A1L8DTG8   A0A1L8DTC3   A0A224XQJ0   A0A0V0GEK0   A0A2R7WAM1   A0A023EW89   A0A146BIV4   A0A1B0CJZ8   Q17NT7   B0WIZ0   A0A0P5C606   A0A182HFD4   A0A0P5ELR8   T1DQB7   A0A182JDR7   A0A182WSH1   Q380J4   A0A182HLC2   A0A195CW48   A0A084VT78   A0A182UYG6   A0A182NS50   A0A182TSI9   A0A182JWT6   A0A182Q5N7   A0A023F934   A0A2M4AC89   A0A0P4Z9H4   A0A182FA70   A0A2M3Z3B6   A0A182YAK7   A0A2M3Z3T5   E9G5D2   A0A162NJ05   A0A182PGP6   A0A2M4A921   A0A2M4A8Z7   A0A0N8D5D7   A0A0P5EZK2   A0A0P5GIS2   A0A0P5IT46   A0A0P5HBR2   A0A0P5M0T7   A0A0P5QZV9   A0A182R628   A0A2M3ZG34   A0A0P5PTC9   A0A2M4BHZ9  

PDB

3T6P     E-value=3.91084e-10,     Score=151

KEGG

101741011    K10637 E3 ubiquitin-protein ligase MYLIP [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase MYLIP

GO

GO:0005856   GO:0016874   GO:0004842   GO:0006511   GO:0016021   GO:0005515   GO:0008270   GO:0006355   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

Length:

196

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00870999999999999

Exp number, first 60 AAs:

0.00843

Total prob of N-in:

0.10305

outside

1  -  196

 

 

Pi

266.861881

Theta

154.425384

Tajima's D

2.331326

CLR

0.56966

CSRT

0.926453677316134

Interpretation

Uncertain