SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11804
Pre Gene Modal
BGIBMGA013673
Annotation
putative_FUN14_domain_containing_1_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.14 PlasmaMembrane   Reliability : 1.461
 

Sequence

CDS
ATGGCAAGGCCCATACCAAACTTACATGACATATCCAGGTTAAACGAAGAAATTAAGCCAAAGGACTCTAAAACAGTTTTAGACTTAGTTATCGACAATGTAAGAAGTAAGTCTTCTAAAGATTTGGTCTTCGGAACTTTAACGGGATGGATGACAGGCATAATGGTCGTCAAAGTGGGGAAAGTGGCTGCTTTTGGGCTAGGCGGGAGTGTGTTGCTCCTGCATATAGCCTGCGAGTACGGGTATATATGTGTTAACTGGGAACGCGTCAGAGAGTCTGCTGGTTCGAGTCACGTGTGGTTGGAGAAGCTGATAAAATTCGTTAAGAAGAACAGTTGTTTCTCTGTTGGGATGCTCGGCGGATTCTTCTTCGGCGTCGCGTCTACTTAA
Protein
MARPIPNLHDISRLNEEIKPKDSKTVLDLVIDNVRSKSSKDLVFGTLTGWMTGIMVVKVGKVAAFGLGGSVLLLHIACEYGYICVNWERVRESAGSSHVWLEKLIKFVKKNSCFSVGMLGGFFFGVAST

Summary

EMBL
BABH01038695    NWSH01000066    PCG80003.1    ODYU01010589    SOQ55807.1    AGBW02010297    + More
OWR48783.1    KQ460141    KPJ17479.1    KQ458963    KPJ04536.1    KQ459460    KPJ00752.1    GDQN01011589    GDQN01010108    GDQN01009524    GDQN01001069    JAT79465.1    JAT80946.1    JAT81530.1    JAT89985.1    NWSH01001393    PCG71407.1    GBYB01001229    JAG70996.1    GDKW01001247    JAI55348.1    GBBI01003347    JAC15365.1    GECL01003297    JAP02827.1    LJIG01022498    KRT80257.1    GBGD01003509    JAC85380.1    GDQN01011243    GDQN01005301    GDQN01003419    GDQN01001107    JAT79811.1    JAT85753.1    JAT87635.1    JAT89947.1    KQ971307    EFA11525.2    JTDY01006845    KOB65651.1    PCG71406.1    ODYU01010383    SOQ55461.1    GEBQ01015296    JAT24681.1    GECZ01006889    JAS62880.1    GAIX01006010    JAA86550.1    BABH01008013    JXUM01071241    KQ562651    KXJ75402.1    JXUM01071244    JXUM01157192    KQ572677    KXJ68011.1    KXJ75405.1    KQ414663    KOC65496.1    GECU01035700    JAS72006.1    APCN01000749    AAAB01008964    EAA12863.3    PCG71405.1    GAMD01000853    JAB00738.1    KQ460207    KPJ16721.1    KQ459597    KPI94838.1    GGFL01004260    MBW68438.1    GGFK01004889    MBW38210.1    AGBW02008321    OWR53706.1    GEDC01018329    JAS18969.1    CH478458    EAT32961.1    GBHO01040241    GBHO01032108    GBHO01009369    GBHO01009323    GBRD01009165    GDHC01020752    JAG03363.1    JAG11496.1    JAG34235.1    JAG34281.1    JAG56656.1    JAP97876.1    KQ434786    KZC05152.1    GGFK01005069    MBW38390.1    GGMR01010698    MBY23317.1    GEZM01029623    JAV86036.1    KB632375    ERL93849.1    APGK01021987    KB740393    ENN80753.1    GBBK01001333    JAC23149.1    GBBL01000788    JAC26532.1    GFAC01007003    JAT92185.1    GEFH01000253    JAP68328.1    GBBM01005908    JAC29510.1    GFPF01007854    MAA19000.1    GDAI01001759    JAI15844.1    GFAA01000454    JAU02981.1    GBZX01002651    JAG90089.1    GEDV01005432    JAP83125.1    GEZM01029624    JAV86035.1    GL732621    EFX70443.1    KZ288381    PBC26521.1    KQ435726    KOX78142.1    GAMC01018554    JAB88001.1    GDHF01031345    JAI20969.1    GBBM01005839    JAC29579.1    GAKP01003661    JAC55291.1    GBYB01009651    JAG79418.1    GBXI01004187    GBXI01001201    JAD10105.1    JAD13091.1    JO842183    AEO33800.1    GGLE01000426    MBY04552.1    PYGN01000215    PSN51026.1    DQ066236    AAY66873.1    GADI01005795    GEFM01003774    JAA68013.1    JAP72022.1    GCES01017266    JAR69057.1    NEVH01016330    PNF25612.1    KQ041857    KKF21617.1   
Pfam
PF04930   FUN14        + More
PF09745   DUF2040
Interpro
IPR007014   FUN14        + More
IPR018612   DUF2040       

Ontologies

Topology

Length:
129
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
30.72635
Exp number, first 60 AAs:
6.66308
Total prob of N-in:
0.23437
outside
1  -  129
 
 

Population Genetic Test Statistics

Pi
296.349561
Theta
209.060616
Tajima's D
1.294105
CLR
0
CSRT
0.739013049347533
Interpretation
Uncertain
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