Silkworm Genome Informatics Database

Gene

KWMTBOMO11798

Pre Gene Modal

BGIBMGA013648

Annotation

PREDICTED:_protein_EFR3_homolog_cmp44E_[Bombyx_mori]

Location

Bomo_Chr20(-):174490-191083 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.85

CDS

ATGACCACGACGACCGTACAAAACCAACCGAAGTCTAACAATTCACAGCACAATACACCACCTGCAAAGCTTCAGAAGACGTATGGGAAGATAGTTTTGACGCTCTACAATTGTCTTCTACCGGAATCAGTATTCAAGGAGACACCTTCACAAGCTGATAGCCTTGACATCGAAACTGAGACAGATCTTAGGATCCTGGGTTGCGAAATGATACAAACAGCTGGCATCCTGCTCCGGCTACCCCAAGTAGCTATGGCGACTGGTCAGATTTATCTACAAAGGTTTTACTACTCGAAATCATTTGTACGATATCCCATGGAAACTATGGCAATGGGTAGCATATACTTAGCGTCCAAAGTCGAAGAGAAACCATGCAGAATAAGAGATGTAATCAACGTGTTTCACCACATCAAACAGGTCAGAGCACAGAAAACAATAAGTCCAATGTTAGTTGACCAAAATTACATAGAATTGAAAAATCAGGTCATCAAAGCTGAAAGACGTATCTTAAAAGAGCTCGGATTCTGTGTACATGTTAAACATCCACACAAACTTATTGTGGTTTACTTACAATTACTGCAATATGAAAAAAACCGCCAACTAATGCAAATGGCTTGGAACTACATGAATGATGCTCTAAGGACAGATGTCTTTATGAGATTTCCTCCTGAAACCATTGCATGTGCTTGCATTTACTTGACGGCCAGAAAAATAGGTTTGCCGCTGCCCAATAACCCACACTGGTTCCTTCTATTCAAAGTTACAGAAGATGATATCAGGGAAGTCTCAATGAGGATACTACAATTATATAAACGTGCTAAAGTCAACCCTGAAGAATTGGAGACCAAAGTTGAGAACCTCCGCAAAATATACATAGCTAATAAACATTCACAGGCAATAAAAGATAAAGAAGCTAAGAACGAAGAAAAGAAACCCGAATCACCCACTGCATCAACTTCTAAAGACACCAGACGGGATACTAAGAAAGAAAAATCTCCTAAAACTCCACCTTTATCCTCAAAGTATCACAGTAGTCATAAATCAAAGAAGGAGCGGAGGTCAAGATCTCCTTATGATAAGAAGAGGGATTATTCAAGTAAGAGGCATCGTTCAAGGTCTCGTGATCGTGATGCAGATCGTTCTAAGGATCGGAGATCTGATGACAAGCGTAGTAGGATGTCTTCGAGGAAATATGATGATTATGACAGTCATCATTGGGTCAAGACGGGCGGAGAGAAGGCGTATTTCTGTCTGCGCACTTATCACCTTTTGGTTCTGCTAGCTAGTGATTCAGTTGGTTCTGTGATGAATCAAACAAGCAAAGGGCAAAGTTGTTGCGGCTGCTGCTCTGCGCTGCGGCCGCGCTACAAGCGCCTCGTCGACAACATCTTCCCGGCGTCACCCCAGGATGGACTCGTTAAATCTAACATGGAAAAGCTCACTTTCTACTCCTTATCCAGTCCGGAAAAACTGGACAGGATCGGAGAGTATCTCTTCCAGAAAGCTTCCAGGGATATTTATAGAAGGAGACACGGATTCGTAATAATAGCGATGGAGGCGATGGACCAGCTGCTGGTCGCGTGCCACTCGCAGACCCTCAATCTCTTCGTGGAAAGCTTCCTCAAAATGGTTCAGAAATTACTGGAGTCCACTGACCCGCAGCTGCAGATCCTCGCCACACAGAGTTTCGTTCGGTTCGCGAACATCGAGGAGGACACGCCGTCCTACCACCGCCGCTACGACTTCTTCGTGTCCAAGTTCAGCGCCATGTGCCACAGCAACCACGGGGAGCCGGGCCCCCGGGACCGGATCCGCCTAGCCGGGATACAGGGCCTGCAGGGCGTCATCAGGAAGACGGTGTCGGACGACCTGGTGGAGAACATATGGGAGGCGCAGCACATGGACAAGATAGTCCCCTCGCTGCTGTACAACATGCAGTCGGCGGAGAAGTACGAGACGGTGTCGTGCGCGGAGGGCGGCGGCGCGGGCGGCGAGGAGGGCGAGGAGGAGTCCCCGCCGCGGCTGGCGGAGGCCTGCCTGCGCGACCTGCTGGCGCGCGCCTCCTTCGGACACATCCGCTCCGTGCTGCGGCCCGTGCTCACGCACTTCGACCGGCACGACCTGTGGATACCGACCGACTTCGCCGTCCACGTCTTCAAAATCATCATGTTCTCGATACAGGCGCAGTACTCGTACAGCGTGGTGGAGGCGCTCATGCAGCAGCTGGAGGCGGGGCGCGGGGGGGTGCGGGCGGCGCGCGCGGCCGTGCTCGCCGCCATCGTCGGCATCGCCGCCGGGGACAGCGTCGGTCCCTCCGTGCTGGAGATCATCAACAACATCCTGACCAACCTGCGCGCGTCCGTGGCGCGGGGAGCCGAGAAGGAGACCGAGGAGAAGCTGTACCAGGAGGCGCTGATCAACGCGCTGGGAGAGTTCGCGGACCACCTGCCGGACTACCAGAAGATCGACATCATGATGTTCATCGTCAACAAGGTGCCCGGCGCCGCCAAGCCCAGCCGCGCCGACGCCATGCTGCAGCACATCCTGCTCAAGTCGCTGCTCAAGGTCGGGGCTACTTACAAAACAACAGAGCTTTCGAAAGCCTTCCCCGCAGCATTCCTGGAAGCTCTGCTCCGACTGTCCAGCGCCACGGAGCCGTCCACTAGGGTGCTGCTGCAGCGGATCCTGCACACGCTGCTGGACAGGAGGGACAACGTGCCGAGACTCGCCGTCGTCACGCTGGACTACGACGCCGCGGGCCTCTCCGTGGAGAAGTGCTCCCGACAGGACCTCATCTTCATCAGCAAGCACGGATACGCCATATTCAGCGCGCTGTATGAAGGGCTGCAGCTGGAGTCCAACAGCACGGAGAACATCGCGTGCATCTACACCACCATCGCGCTGCTGTGCGTCGAGCTGGCGGCCGACGACACGCTGTGCGACCTCATGCTGCTCATCCTGGCCATCCAGCAGTCGAGCATATCGAACCCCGTGCTGTCGGTGTCGCAGCAGTGCCAGCTGCAGGCCGTCAGCATCTCCTTGGCCGCGCTGCTGCCGCACGTCGCCAAGCTGCCCCGCCTCGCCGACTACATCCACAAGGTGGTGGAGGCTCGTCGCGAAGAGTGCGGTCACCTGCTGCCGCCCCTCCAGCACGAGTACCGACTGTCTGACCCGACTCTGCTGCCGGCCAAGGTGCCCTACCTCATGATGGACCAGATGGCGATATCGGAGTGCCTGAAGGCGAGCGGCGTGGAGTGCGGGCGGCTGCAGGGCGCCGCGCCCTACTGCGGGGGAGGGCCGCTGCAGCACCGACACAGCTGGATCGAGACCGGCGCCGCGGCGGGGCGGGACAGCCTGGCGGACATCGCGGCCGGCACCGAGCCCGACAGCGCCGCCAGCTCACCCACACTCGCAAGGCAGGCGCCGGCGGAGTGCGCTGGGGTGAGCCTGGAGGCGCTGCGGCGCGCGGCGGAGGGCGGGTCGGGGGCGGAGCGCCGGGACGCGGCGCAGCGCCGCCGGGCACTCAACCTCGCCTTCCGCACCGCGCCCTTCCACCACCTCATGCAGGTCACGCAGCCCAAGTACGAGATCCAAGAGAAGCTGGAGGAGATCTTCCGCTCGGTGTCGGAGGAGCCGCTGCTGGCGCCCTCCCTCAAGTCGGGCCCGCCGCTGCCGGACCTCTGCCTCTACTGA

Protein

MTTTTVQNQPKSNNSQHNTPPAKLQKTYGKIVLTLYNCLLPESVFKETPSQADSLDIETETDLRILGCEMIQTAGILLRLPQVAMATGQIYLQRFYYSKSFVRYPMETMAMGSIYLASKVEEKPCRIRDVINVFHHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYMNDALRTDVFMRFPPETIACACIYLTARKIGLPLPNNPHWFLLFKVTEDDIREVSMRILQLYKRAKVNPEELETKVENLRKIYIANKHSQAIKDKEAKNEEKKPESPTASTSKDTRRDTKKEKSPKTPPLSSKYHSSHKSKKERRSRSPYDKKRDYSSKRHRSRSRDRDADRSKDRRSDDKRSRMSSRKYDDYDSHHWVKTGGEKAYFCLRTYHLLVLLASDSVGSVMNQTSKGQSCCGCCSALRPRYKRLVDNIFPASPQDGLVKSNMEKLTFYSLSSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHRRYDFFVSKFSAMCHSNHGEPGPRDRIRLAGIQGLQGVIRKTVSDDLVENIWEAQHMDKIVPSLLYNMQSAEKYETVSCAEGGGAGGEEGEEESPPRLAEACLRDLLARASFGHIRSVLRPVLTHFDRHDLWIPTDFAVHVFKIIMFSIQAQYSYSVVEALMQQLEAGRGGVRAARAAVLAAIVGIAAGDSVGPSVLEIINNILTNLRASVARGAEKETEEKLYQEALINALGEFADHLPDYQKIDIMMFIVNKVPGAAKPSRADAMLQHILLKSLLKVGATYKTTELSKAFPAAFLEALLRLSSATEPSTRVLLQRILHTLLDRRDNVPRLAVVTLDYDAAGLSVEKCSRQDLIFISKHGYAIFSALYEGLQLESNSTENIACIYTTIALLCVELAADDTLCDLMLLILAIQQSSISNPVLSVSQQCQLQAVSISLAALLPHVAKLPRLADYIHKVVEARREECGHLLPPLQHEYRLSDPTLLPAKVPYLMMDQMAISECLKASGVECGRLQGAAPYCGGGPLQHRHSWIETGAAAGRDSLADIAAGTEPDSAASSPTLARQAPAECAGVSLEALRRAAEGGSGAERRDAAQRRRALNLAFRTAPFHHLMQVTQPKYEIQEKLEEIFRSVSEEPLLAPSLKSGPPLPDLCLY

Uniprot

A0A2W1BPY6

Pubmed

28756777

EMBL

KZ149937 PZC77119.1

Interpro

IPR016024 ARM-type_fold + More
IPR011989 ARM-like

SUPFAM

SSF48371 SSF48371

Gene 3D

1.25.10.10

ProteinModelPortal

A0A2W1BPY6

PDB

2I53 E-value=1.27901e-25, Score=294

KEGG

101736619 K21842 protein EFR3 | (RefSeq) protein EFR3 homolog cmp44E

GO

GO:0072659 GO:0005634 GO:0005488 GO:0022857 GO:0016021 GO:0005524 GO:0006139 GO:0019205 GO:0043564 GO:0006418 GO:0003824

Length:

1230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.744289999999997

Exp number, first 60 AAs:

0.00525

Total prob of N-in:

0.03245

outside

1 - 1230

Pi

214.167307

Theta

172.489831

Tajima's D

1.00426

CLR

0.322281

CSRT

0.661216939153042

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics