Gene

KWMTBOMO11791

Pre Gene Modal

BGIBMGA013653

Annotation

PREDICTED:_glycosylphosphatidylinositol_anchor_attachment_1_protein_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr20(-):110263-116395      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.8

CDS

ATGGGGCTTTTGTCAGACCCAGAGTACGGTTCGGTAAAATGGGTGAGGATTCTAAAGAAGGTTCACAGGCCGCTTTGCTTCCTTTGTTATGCTGTGGCCCTAGTATGGTTCGTGATGTTGGCTAACAGAGACTTTAATAATGAGACTTATTTTTCTGAAAATGCTCTGCTTCCTGGGCTCGTTACCAACGAGTTCAACGGCGAGTATGCTGCAAAGCAGTATTTGACTGAATTCGAGCAGGAACTGGAGGAAAAGTATTATGACACAGAGAAGATACCAGTCCCGTGGCTGGTGGCCAAGATGTCTCAGCTTCACCTAGAGGTTTACACACACAACTATACACTAAACTACCCTTTAGGACAAGGTCAGATTTACAAAGGCACAAATGTGTATGGCATCCTTAGAGCTGCTCGTACTCCTTCCTTGGAAGCTCTAGTAGTTTCTGCTCCATTCAGACCCCTGTCTTCACATCAGAAGAGCACAGCAGCTGGAATTGCATTAATGTTGGCTTTTGCAGAGTTTGCTAGACCACAAAAATATTGGGCCAAAGATATAATCTTCCTTGTAACGGAACATGAGCAACTAGGAATGCAGGCATGGCTAGAAGCTTATCATGGCCTGCAAAGTGACTCTGAAACATTTTACACTACTCTCGGCAGTTTTTGGAAGCCTGGTAGTTTTGGTCTTGACCTGACTAATTTTTTCCCTGGATTTGACTGGCTTGGGAGTCACAAGAAGTGTCTCAACCCTGGACAGTTGAAAGCCAGGTCTGGAGCAATTCAAGCAGCTATTAATTTGGAGTTCCATTCTCCAAAGATAAAATATGTTGAAGTCAAAGTGGAAGGTTTGAATGGACAACTACCAAACTTGGACCTGGTCAACTTGGTGCACAAGCTGTGTGTGAAGTCCGGTATACACCACTCTTACAAGAACAGCTACTCCTGGGTCCGCAACCGAAATAAAGTGGACGACTGGGTGAACAACATCTGGACCATGGTGGGGATGGTCAGCACGCAACTGGCCGGGGTCCCCAACGGTAACCACGGGCTGTTCCACCGGTTCGGCATAGAGGCCGTGACCCTGGAGGGCCGGGACTCCTCGGACGGGCCGGCGCCGCGCGTGCACTCGCTCTCCGCCGCTAACTTCCACCGCCTCGGCCTCGCGCTCGAGACCGTCCTCCGCTCCCTCAACAACTTGCTGGAGGCCTTCCACCAGAGCTACTTCTTCTACATGCTGCCCGCCACCGATCGGTTTGTGTCCATCGGCCAGTACATGCCCAGCCTGTGCCTGATGTGCGCGGCCATGCTGCTCCGCGCGCTGGCGCTGTGGGTGGGCGTCCAGCCGACACAGGAACGCAGCAGTCAAGCTGAAGACCCCGTAGACTCGGAGGCCAAAGAACCAGGAGAGCGACCGCCTGAACGACTATCAGAAAGCTCAAACCAGCGAGTGCACAACAGGAAGACGATCAAAGAAAAACATAGTGATTCTGAATCTGAGATACCAGGAGAACAGGATGTTAAAGAAGTAGTACAGAGCTCAGACGAAAGGGTCGCGAACAGCCAAACCCAACTAAACTTCAGCATGGTCAATGTCGGTGCCAACTATCTGTTGGTGCACGTGCTGGGGTACGCCGCCATGAACTCGCCCGTCCTCTTCACGCAGCTCGGCGCCAAATACTTTAGTCTGCCCTCCGAGGTGTCGGTGTACTACGGCCTGTGCGTGACCTCCGCCGTGCTGGTGGTGGCCGCGCCCGCCCTGCCGCGCCTGCTCCGCCGCGGCGCCCTCACGCACGAGGAGCTGACGCTGGTCAACATCCTGGTGCTGATCGAGCTGTCGACGCTGTGCCTCGCGCTGGGCATGCACAACTTCCCGCTGGGGCTGGCGGTCGCGGCCCTCTACACGCCGGTCGCCCTGCTGTCAGGAGTTGTAGTCCGAGAACGGGGCTGGATAAGCGTGTGGCTGCAGCGTGCTGCGTGCGCCGTGCTGCAGCCCCTGGGCGCCCTGACCGCCGCCATGTGCGTGTACAGCGTCGCCGTGTACGGGGGGGCCGAGGGGGCCGCAGCCGCCGCGGGGAGGGGCCGGGACGCCGCCATGCAGGCCGTCATGTTCGCCGTGGCAGATTCCCTGATCTACGGCAACTGGGTGTTCAACGTGGCGGCGTCGGTGCTGCTGCCGGTGTGGGTGGTGCTCTGGCAGATCGTCTGCAACAGCGTGGAGGGGCCTCCCCCCGCGCGCCGTTGA

Protein

MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPLGQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFARPQKYWAKDIIFLVTEHEQLGMQAWLEAYHGLQSDSETFYTTLGSFWKPGSFGLDLTNFFPGFDWLGSHKKCLNPGQLKARSGAIQAAINLEFHSPKIKYVEVKVEGLNGQLPNLDLVNLVHKLCVKSGIHHSYKNSYSWVRNRNKVDDWVNNIWTMVGMVSTQLAGVPNGNHGLFHRFGIEAVTLEGRDSSDGPAPRVHSLSAANFHRLGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPSLCLMCAAMLLRALALWVGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANSQTQLNFSMVNVGANYLLVHVLGYAAMNSPVLFTQLGAKYFSLPSEVSVYYGLCVTSAVLVVAAPALPRLLRRGALTHEELTLVNILVLIELSTLCLALGMHNFPLGLAVAALYTPVALLSGVVVRERGWISVWLQRAACAVLQPLGALTAAMCVYSVAVYGGAEGAAAAAGRGRDAAMQAVMFAVADSLIYGNWVFNVAASVLLPVWVVLWQIVCNSVEGPPPARR

Uniprot

H9JVU0   A0A2W1BWR1   A0A2A4JZN8   A0A194Q6Y9   A0A1E1WKS3   A0A3S2NNF2   + More
A0A2H1VTF8   D6WQR2   A0A026W1Q4   A0A067RR79   A0A158NVM6   E2BWN5   A0A195B7P1   A0A195ED68   A0A195FV43   A0A151XBX5   F4WNQ6   A0A1Y1M877   A0A151IP35   A0A232FGX8   A0A0M8ZQR3   A0A2J7RLZ5   A0A2P8ZCF1   A0A0L7QNZ5   A0A1B6C667   K7IR57   A0A154P008   A0A182KV50   A0A182I5W5   V9IEU6   A0A182WXU4   Q7QDZ1   U5EPK2   A0A182VDG6   A0A336MQS1   A0A1A9WAP1  

Pubmed

19121390    28756777    26354079    18362917    19820115    24508170    + More
30249741    24845553    21347285    20798317    21719571    28004739    28648823    29403074    20075255    20966253    12364791    14747013    17210077   

EMBL

BABH01040661    KZ149937    PZC77116.1    NWSH01000350    PCG77148.1    KQ459460    + More
KPJ00765.1    GDQN01003526    JAT87528.1    RSAL01000025    RVE52116.1    ODYU01004180    SOQ43772.1    KQ971354    EFA06039.1    KK107558    QOIP01000012    EZA48989.1    RLU15978.1    KK852513    KDR22254.1    ADTU01002895    GL451165    EFN79890.1    KQ976565    KYM80543.1    KQ979074    KYN22789.1    KQ981215    KYN44510.1    KQ982316    KYQ57847.1    GL888237    EGI64249.1    GEZM01039758    JAV81218.1    KQ976892    KYN07229.1    NNAY01000242    OXU29770.1    KQ435955    KOX68046.1    NEVH01002601    PNF41829.1    PYGN01000106    PSN54175.1    KQ414843    KOC60304.1    GEDC01028578    GEDC01008103    JAS08720.1    JAS29195.1    KQ434786    KZC05172.1    APCN01003535    JR042544    AEY59633.1    AAAB01008848    EAA07058.4    GANO01000138    JAB59733.1    UFQT01002145    SSX32762.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007266    UP000053097    + More
UP000279307    UP000027135    UP000005205    UP000008237    UP000078540    UP000078492    UP000078541    UP000075809    UP000007755    UP000078542    UP000215335    UP000053105    UP000235965    UP000245037    UP000053825    UP000002358    UP000076502    UP000075882    UP000075840    UP000076407    UP000007062    UP000075903    UP000091820   

PRIDE

H9JVU0   

Pfam

PF04114   Gaa1        + More
PF00083   Sugar_tr

Interpro

IPR007246   Gaa1        + More
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JVU0   A0A2W1BWR1   A0A2A4JZN8   A0A194Q6Y9   A0A1E1WKS3   A0A3S2NNF2   + More
A0A2H1VTF8   D6WQR2   A0A026W1Q4   A0A067RR79   A0A158NVM6   E2BWN5   A0A195B7P1   A0A195ED68   A0A195FV43   A0A151XBX5   F4WNQ6   A0A1Y1M877   A0A151IP35   A0A232FGX8   A0A0M8ZQR3   A0A2J7RLZ5   A0A2P8ZCF1   A0A0L7QNZ5   A0A1B6C667   K7IR57   A0A154P008   A0A182KV50   A0A182I5W5   V9IEU6   A0A182WXU4   Q7QDZ1   U5EPK2   A0A182VDG6   A0A336MQS1   A0A1A9WAP1  

KEGG

101747211    K05289 GPI-anchor transamidase subunit GAA1 | (RefSeq) glycosylphosphatidylinositol anchor attachmen

PATHWAY

00563    Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0042765   GO:0022857   GO:0016021   GO:0016255   GO:0005215   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR13304  

Length:

746

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

171.44394

Exp number, first 60 AAs:

18.48848

Total prob of N-in:

0.85095

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  40

outside

41  -  423

TMhelix

424  -  446

inside

447  -  530

TMhelix

531  -  553

outside

554  -  567

TMhelix

568  -  590

inside

591  -  601

TMhelix

602  -  621

outside

622  -  624

TMhelix

625  -  644

inside

645  -  656

TMhelix

657  -  679

outside

680  -  708

TMhelix

709  -  731

inside

732  -  746

 

 

Pi

249.897042

Theta

206.641053

Tajima's D

0.749772

CLR

0.003765

CSRT

0.592120393980301

Interpretation

Uncertain