Gene

KWMTBOMO11771  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000201

Annotation

proteasome_beta_subunit_[Bombyx_mori]

Location

Bomo_Chr19(-):14443105-14443940      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.51 Mitochondrial   Reliability : 1.226

CDS

ATGTTGAGCGTTAACGAGAACTTTCCTGAATATGCTGTGCCTGGTGCGAAACAGCATCGTTTCGAGCCCTACGCGGACAACGGAGGTAGTATTGTAGCCATCGCCGGCGATGATTATGCCGTTATCGGAGCAGACACTCGTCTCAGCACTGGATTTTCCATATATACCAGAGACCAAAAAAAGCTGTTCAAATTATCTGAGAGTACAGTATTGGGAGCGACTGGCTGCTGGTGTGACACATTAACCTTGACGCGTCTTCTACAAGCGAGGATGCAGATGTACGAACACGAGCATAACAAATCTATGACCACTCCGGCAGTCGCACAGATGCTCTCAACTATGTTGTATTACAAACGATTTTTCCCATACTACGTATCCAACGTGTTGGCGGGTTTGGACAGCGACGGTAAGGGATGTGTATATAGTTACGACCCTATCGGACACTGTGCGCGCCATAACTTCCGCGCTGGTGGTTCCGCTGCTGCACAGCTGCAACCGCTCCTCGACAATCAAATTGGCTTAAAGAATATGCAGAATGTAACAGAAGCTCCTTTGCCTAGGGAAAAGGCCCTTGCTCTTCTGAAGGATGTGTTCATCAGTGCTGCAGAACGTGACATTTACACTGGAGACTCCATCTACATTCTCATCATCACTGCAAGTGGTATTCAAGAAGAGAAATTTGAACTTCGCAAAGATTAA

Protein

MLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD

Uniprot

Q1HQ18   A0A2H1W3L5   A0A212EJX4   A0A2A4IUS8   I4DMH1   A0A194QZI2   + More
B6ZAY6   S4PGV0   I4DJP0   A0A0L7KUS6   A0A194PM38   A0A1E1WL98   A0A1W4WLK5   A0A2P8YPU4   D6WD83   A0A2D1QUD1   N6TDD9   A0A1Y1NFB8   A0A3L8DJD5   A0A2A3ENL7   A0A088A9Q2   A0A0L7QX41   E9IJS5   E2AV04   A0A0N0BD07   A0A2J7RF54   E2B518   A0A067QEY5   A0A195B8T3   F4X0J5   A0A158ND25   A0A151IDY1   A0A151XG90   A0A0C9QBN9   A0A1B1ZGH5   A0A195DUB4   A0A023EKH7   Q16XT2   A0A182N1W0   A0A084WDX4   A0A182J7S9   A0A0T6B1G7   A0A182YQQ9   A0A151IDU8   A0A182QBF3   B0WAD5   A0A182REP1   K7IW45   A0A2R5LC90   A0A1Q3FCX2   A0A182JV84   A0A232EMK4   A0A182SXQ6   A0A182VFU2   A0A182KNL1   A0A182XJH4   Q7Q7W2   A0A182HQP2   A0A182PUQ2   T1J791   A0A182ULG6   A0A182LSN9   A0A182WM44   A0A2M4AH82   A0A2M4AH89   A0A2M3ZHI7   A0A1Z5KX81   A0A1B6C5V8   W5J9I3   A0A023FK16   A0A293N2G5   A0A023FUQ6   A0A023GJW8   G3MRB6   A0A1I8NDR4   A0A1E1X2Y9   A0A0L0BUP5   A0A182FL90   W8BYK0   A0A034WTT2   A0A0K8VUF8   A0A154NYQ9   B4L9S3   A0A0M4EKH7   T1EAP6   A0A2M4BZK1   B4LCY3   E0W1R5   A0A224YRQ2   A0A0A1X298   A0A0P4VNN7   R4G558   A0A131XK59   A0A131YJ78   L7M7J5   A0A1L8EE81   A0A1I8P9I5   B4J0F1   A0A164Q8S6   A0A0K8R8H6  

Pubmed

19121390    22118469    22651552    26354079    28756777    23622113    + More
26227816    29403074    18362917    19820115    23537049    28004739    30249741    21282665    20798317    24845553    21719571    21347285    27464714    24945155    26483478    17510324    24438588    25244985    20075255    28648823    20966253    12364791    14747013    17210077    28528879    20920257    23761445    22216098    25315136    28503490    26108605    24495485    25348373    17994087    20566863    28797301    25830018    27129103    28049606    26830274    25576852   

EMBL

BABH01040705    DQ443234    ABF51323.1    ODYU01006118    SOQ47680.1    AGBW02014361    + More
OWR41803.1    NWSH01006778    PCG63254.1    PCG63256.1    AK402489    BAM19111.1    KQ460949    KPJ10385.1    FJ378903    KZ149915    ACJ13433.1    PZC77978.1    GAIX01006055    JAA86505.1    AK401508    BAM18130.1    JTDY01005418    KOB67022.1    KQ459598    KPI94501.1    GDQN01003418    JAT87636.1    PYGN01000445    PSN46224.1    KQ971321    EEZ99493.1    KY285073    ATP16176.1    APGK01034609    KB740914    KB632352    ENN78384.1    ERL93261.1    GEZM01004165    JAV96449.1    QOIP01000007    RLU20507.1    KZ288212    PBC32842.1    KQ414705    KOC63109.1    GL763883    EFZ19173.1    GL442974    EFN62722.1    KQ435891    KOX69414.1    NEVH01004413    PNF39466.1    GL445685    EFN89226.1    KK853682    KDQ97904.1    KQ976558    KYM80650.1    GL888498    EGI59987.1    ADTU01012187    KQ977906    KYM98870.1    KQ982173    KYQ59414.1    GBYB01000664    GBYB01012844    JAG70431.1    JAG82611.1    KU756279    ANX99822.1    KQ980341    KYN16473.1    JXUM01057612    JXUM01086775    GAPW01003956    KQ563590    KQ561963    JAC09642.1    KXJ73624.1    KXJ77046.1    CH477533    EAT39423.1    ATLV01023078    KE525340    KFB48418.1    LJIG01016246    KRT81178.1    KYM98866.1    AXCN02000973    DS231870    EDS41025.1    GGLE01003004    MBY07130.1    GFDL01009686    JAV25359.1    NNAY01003352    OXU19567.1    AAAB01008948    EAA10482.4    APCN01004672    JH431916    AXCM01006066    GGFK01006822    MBW40143.1    GGFK01006823    MBW40144.1    GGFM01007263    MBW28014.1    GFJQ02007253    JAV99716.1    GEDC01028412    JAS08886.1    ADMH02002077    ETN59520.1    GBBK01003524    JAC20958.1    GFWV01022536    MAA47263.1    GBBL01001804    JAC25516.1    GBBM01002368    JAC33050.1    JO844417    AEO36034.1    GFAC01005586    JAT93602.1    JRES01001437    KNC22929.1    GAMC01002143    JAC04413.1    GAKP01001235    JAC57717.1    GDHF01017320    GDHF01009792    GDHF01002425    JAI34994.1    JAI42522.1    JAI49889.1    KQ434783    KZC04809.1    CH933816    EDW17121.1    CP012525    ALC44688.1    GAMD01000227    JAB01364.1    GGFJ01009017    MBW58158.1    CH940647    EDW68844.1    DS235873    EEB19647.1    GFPF01005508    MAA16654.1    GBXI01009281    JAD05011.1    GDKW01002618    JAI53977.1    ACPB03014465    GAHY01000191    JAA77319.1    GEFH01001829    JAP66752.1    GEDV01010576    JAP77981.1    GACK01005921    JAA59113.1    GFDG01001791    JAV17008.1    CH916366    EDV96787.1    LRGB01002451    KZS07533.1    GADI01006650    JAA67158.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000037510    UP000053268    + More
UP000192223    UP000245037    UP000007266    UP000019118    UP000030742    UP000279307    UP000242457    UP000005203    UP000053825    UP000000311    UP000053105    UP000235965    UP000008237    UP000027135    UP000078540    UP000007755    UP000005205    UP000078542    UP000075809    UP000078492    UP000069940    UP000249989    UP000008820    UP000075884    UP000030765    UP000075880    UP000076408    UP000075886    UP000002320    UP000075900    UP000002358    UP000075881    UP000215335    UP000075901    UP000075903    UP000075882    UP000076407    UP000007062    UP000075840    UP000075885    UP000075902    UP000075883    UP000075920    UP000000673    UP000095301    UP000037069    UP000069272    UP000076502    UP000009192    UP000092553    UP000008792    UP000009046    UP000015103    UP000095300    UP000001070    UP000076858   

PRIDE

Q1HQ18    A0A088A9Q2   

Pfam

PF00227   Proteasome

Interpro

IPR035202   Proteasome_beta1        + More
IPR001353   Proteasome_sua/b       
IPR023333   Proteasome_suB-type       
IPR029055   Ntn_hydrolases_N       

SUPFAM

SSF56235   SSF56235       

Gene 3D

3.60.20.10    

ProteinModelPortal

Q1HQ18   A0A2H1W3L5   A0A212EJX4   A0A2A4IUS8   I4DMH1   A0A194QZI2   + More
B6ZAY6   S4PGV0   I4DJP0   A0A0L7KUS6   A0A194PM38   A0A1E1WL98   A0A1W4WLK5   A0A2P8YPU4   D6WD83   A0A2D1QUD1   N6TDD9   A0A1Y1NFB8   A0A3L8DJD5   A0A2A3ENL7   A0A088A9Q2   A0A0L7QX41   E9IJS5   E2AV04   A0A0N0BD07   A0A2J7RF54   E2B518   A0A067QEY5   A0A195B8T3   F4X0J5   A0A158ND25   A0A151IDY1   A0A151XG90   A0A0C9QBN9   A0A1B1ZGH5   A0A195DUB4   A0A023EKH7   Q16XT2   A0A182N1W0   A0A084WDX4   A0A182J7S9   A0A0T6B1G7   A0A182YQQ9   A0A151IDU8   A0A182QBF3   B0WAD5   A0A182REP1   K7IW45   A0A2R5LC90   A0A1Q3FCX2   A0A182JV84   A0A232EMK4   A0A182SXQ6   A0A182VFU2   A0A182KNL1   A0A182XJH4   Q7Q7W2   A0A182HQP2   A0A182PUQ2   T1J791   A0A182ULG6   A0A182LSN9   A0A182WM44   A0A2M4AH82   A0A2M4AH89   A0A2M3ZHI7   A0A1Z5KX81   A0A1B6C5V8   W5J9I3   A0A023FK16   A0A293N2G5   A0A023FUQ6   A0A023GJW8   G3MRB6   A0A1I8NDR4   A0A1E1X2Y9   A0A0L0BUP5   A0A182FL90   W8BYK0   A0A034WTT2   A0A0K8VUF8   A0A154NYQ9   B4L9S3   A0A0M4EKH7   T1EAP6   A0A2M4BZK1   B4LCY3   E0W1R5   A0A224YRQ2   A0A0A1X298   A0A0P4VNN7   R4G558   A0A131XK59   A0A131YJ78   L7M7J5   A0A1L8EE81   A0A1I8P9I5   B4J0F1   A0A164Q8S6   A0A0K8R8H6  

PDB

6MSK     E-value=2.74067e-77,     Score=732

KEGG

100101166    K02732 20S proteasome subunit beta 6 [EC:3.4.25.1] | (RefSeq) proteasome beta subunit

PATHWAY

03050    Proteasome - Bombyx mori (domestic silkworm)

GO

GO:0005839   GO:0004298   GO:0051603   GO:0004175   GO:0010498   GO:0005737   GO:0005634   GO:0043161   GO:0010499   GO:0016567   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR11599:SF59  

Length:

232

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09703

Exp number, first 60 AAs:

0.00598

Total prob of N-in:

0.02015

outside

1  -  232

 

 

Pi

13.906861

Theta

10.746567

Tajima's D

0.863702

CLR

1.007115

CSRT

0.634618269086546

Interpretation

Uncertain