Gene

KWMTBOMO11768  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014334

Annotation

PREDICTED:_SAP30-binding_protein_[Amyelois_transitella]

Location

Bomo_Chr19(-):14420075-14421080      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.911

CDS

ATGACTTCCCAAGCGTTAGCGTCGCTCACAGCGACTTACACCGACTCTGAAGGCGAAGAAGATATGGAAGACCAAACGCCTGAAAAAGAAGAGCCAAAAGAAGCTCATTCCGTCCCGACCAGTCCTCGGAAAGTGGAGGAAAGTAACAAGCCAGCCTCAGCTCCAGTTTCCCCTAAGAAAAGTCTAGTTAGCTACGTAGATGACACGATAGTGTCTGACGAAGAACCGACATCACCAGTTAATGAAAATGAAGATGACATGCGCCGTTTGTCCATGGAGACCGATACAGACGAAGCAGTACAGCGATCAGACCCTGATGACTCCGAAGACGGCATCACAATCCCACCTGAACCATCAGGAAAGTGTCCCAAAGAACTACAAGAATCTATAGCAAAATTTTACAACCGCATGTTAACAGAAGGACTTGACATGAATAGAATCATACAGGACAAGAAAAATTTTAGGAATCCAAGTATATATGAAAAATTGATACAATTCTGTGATATCAATGAACTTGATACAAATTATCCTCCAGAAATATATGATCCATTAAAATGGGGGAAAGAATCTTACTATGAGGAACTCTCTAAAGTTCAAAAACTGGAAATGGAGAGAAGAGAGAAAGAAAAAAAAGAAAAATTGTCAAAAATTGACTTTATCAGTGGAGTTGCCAAGAAACCTGAAAGTGACGATGAAAAGAAAAGAAAATCAAAATGGGATCAAGCTGCTCCCAATATAGGCTCTAAGCCGAATATCAAACAACCAGGCCTAGTGCAACAACCACTGACAACAAACATCACTGGCACAAAGGGAACTGTCATTGCTGCTTTTGGATCTTTACCAAAAAAACCAAAGATCTGA

Protein

MTSQALASLTATYTDSEGEEDMEDQTPEKEEPKEAHSVPTSPRKVEESNKPASAPVSPKKSLVSYVDDTIVSDEEPTSPVNENEDDMRRLSMETDTDEAVQRSDPDDSEDGITIPPEPSGKCPKELQESIAKFYNRMLTEGLDMNRIIQDKKNFRNPSIYEKLIQFCDINELDTNYPPEIYDPLKWGKESYYEELSKVQKLEMERREKEKKEKLSKIDFISGVAKKPESDDEKKRKSKWDQAAPNIGSKPNIKQPGLVQQPLTTNITGTKGTVIAAFGSLPKKPKI

Description

Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.

Catalytic Activity

ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala)

Cofactor

Zn(2+)

Subunit

Monomer.

Similarity

Belongs to the eIF-2B alpha/beta/delta subunits family.
Belongs to the class-II aminoacyl-tRNA synthetase family.
Belongs to the peptidase C14A family.

Uniprot

H9JXR7   A0A2A4IVP1   A0A2W1BYS7   A0A2H1W3S1   A0A194QY41   A0A194PNE0   + More
A0A0L7KSD6   A0A1E1WDK5   S4NJ49   A0A212F8H5   A0A0T6B3G9   A0A2J7Q777   A0A2J7Q0P1   A0A067RAL8   A0A1Y1MAI8   A0A1B6KIT7   A0A2P8XWK1   D6WE90   A0A154P361   A0A0L7QXL1   A0A310SS11   A0A0N1ITN9   A0A088A300   A0A2A3EAI2   J3JYZ1   A0A1B6FJ29   N6TI21   A0A1B6DMQ4   Q16Y71   A0A1L8DH95   A0A2J7RLJ4   A0A2D1QUE0   A0A1W4XTK5   A0A023ENL6   A0A182GRX4   U5EGX1   A0A0C9QAW8   W5JAN3   A0A182QYE4   K7IR63   A0A2M4AX14   A0A2M4AXI4   A0A336KB27   A0A2Y9D1P2   A0A182MMQ5   A0A182M2I4   E0VQK7   A0A182ITX0   A0A182WLF5   A0A182P477   A0A084VZ39   A0A0K8TRN4   V5I7V6   A0A182JZW9   A0A224XHY4   A0A2M4AYH9   A0A182FDG5   B0VZB6   A0A2M4BSF1   A0A2M4CHA5   A0A1Q3F7J5   A0A0V0G705   A0A069DR34   E2BEF0   A0A182TBB2   A0A151WW08   A0A2C9GRP0   A0A182UT13   A0A182KQA2   Q7QIW0   C4WSK8   A0A2S2QB19   A0A023F862   A0A0P4VWC3   R4G3D1   A0A151JCU1   A0A182TI45   A0A1I8NTW2   A0A1B6JVW0   E2AAN9   A0A182WWW3   A0A195FX38   A0A2R7VTZ6   A0A182RF50   A0A182YEI2   T1PL17   L7M414   B4KPP6   A0A195ATW1   A0A224ZAT0   A0A131XH90   A0A232F0Z2   A0A131Z1N7   B7PRU5   V5IIL4   A0A3Q0IJ64   A0A1I8NCR6  

Pubmed

19121390    28756777    26354079    26227816    23622113    22118469    + More
24845553    28004739    29403074    18362917    19820115    22516182    23537049    17510324    24945155    26483478    20920257    23761445    20075255    20566863    24438588    26369729    26334808    20798317    20966253    12364791    14747013    17210077    25474469    27129103    25244985    25576852    17994087    28797301    28049606    28648823    26830274    25765539    25315136   

EMBL

BABH01045843    NWSH01006778    PCG63252.1    KZ149915    PZC77980.1    ODYU01006119    + More
SOQ47683.1    KQ460949    KPJ10387.1    KQ459598    KPI94503.1    JTDY01006269    KOB66157.1    GDQN01005996    JAT85058.1    GAIX01013819    JAA78741.1    AGBW02009726    OWR50030.1    LJIG01016023    KRT81846.1    NEVH01017447    PNF24435.1    NEVH01019964    PNF22160.1    KK852779    KDR16701.1    GEZM01036248    JAV82859.1    GEBQ01028609    GEBQ01003082    JAT11368.1    JAT36895.1    PYGN01001238    PSN36385.1    KQ971326    EFA00846.1    KQ434809    KZC06356.1    KQ414704    KOC63340.1    KQ761039    OAD58374.1    KQ435767    KOX75282.1    KZ288322    PBC28219.1    BT128472    AEE63429.1    GECZ01019554    JAS50215.1    APGK01025901    KB740605    KB632095    ENN80049.1    ERL88747.1    GEDC01010312    JAS26986.1    CH477523    EAT39568.1    GFDF01008354    JAV05730.1    NEVH01002687    PNF41669.1    KY285044    ATP16147.1    GAPW01002591    JAC11007.1    JXUM01016692    KQ560464    KXJ82294.1    GANO01003266    JAB56605.1    GBYB01011633    GBYB01011634    JAG81400.1    JAG81401.1    ADMH02001663    ETN61512.1    AXCN02000424    GGFK01012018    MBW45339.1    GGFK01012173    MBW45494.1    UFQS01000185    UFQT01000185    SSX00878.1    SSX21258.1    AXCM01003600    AXCM01008295    DS235430    EEB15663.1    ATLV01018597    KE525239    KFB43233.1    GDAI01000800    JAI16803.1    GALX01005770    JAB62696.1    GFTR01004320    JAW12106.1    GGFK01012451    MBW45772.1    DS231813    EDS25692.1    GGFJ01006875    MBW56016.1    GGFL01000505    MBW64683.1    GFDL01011546    JAV23499.1    GECL01003021    JAP03103.1    GBGD01002554    JAC86335.1    GL447768    EFN85995.1    KQ982691    KYQ52063.1    APCN01000155    AAAB01008807    EAA04000.3    ABLF02039861    AK340230    BAH70878.1    GGMS01005732    MBY74935.1    GBBI01001211    GEMB01003211    JAC17501.1    JAS00001.1    GDKW01001605    JAI54990.1    ACPB03010289    GAHY01002305    JAA75205.1    KQ979038    KYN23476.1    GECU01009781    GECU01008141    GECU01004394    JAS97925.1    JAS99565.1    JAT03313.1    GL438137    EFN69489.1    KQ981200    KYN45003.1    KK854043    PTY10160.1    KA648653    AFP63282.1    GACK01007136    JAA57898.1    CH933808    EDW09156.1    KQ976738    KYM75668.1    GFPF01012666    MAA23812.1    GEFH01003123    JAP65458.1    NNAY01001357    OXU24252.1    GEDV01003224    JAP85333.1    ABJB010848341    DS775215    EEC09317.1    GANP01002982    JAB81486.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000235965    UP000027135    UP000245037    UP000007266    UP000076502    UP000053825    UP000053105    UP000005203    UP000242457    UP000019118    UP000030742    UP000008820    UP000192223    UP000069940    UP000249989    UP000000673    UP000075886    UP000002358    UP000075884    UP000075883    UP000009046    UP000075880    UP000075920    UP000075885    UP000030765    UP000075881    UP000069272    UP000002320    UP000008237    UP000075901    UP000075809    UP000075840    UP000075903    UP000075882    UP000007062    UP000007819    UP000015103    UP000078492    UP000075902    UP000095300    UP000000311    UP000078541    UP000075900    UP000076408    UP000009192    UP000078540    UP000215335    UP000001555    UP000079169    UP000095301   

PRIDE

H9JXR7   

Pfam

PF07818   HCNGP        + More
PF01008   IF-2B
PF01436   NHL
PF07973   tRNA_SAD
PF01411   tRNA-synt_2c

Interpro

IPR012479   SAP30BP        + More
IPR000649   IF-2B-related       
IPR037171   NagB/RpiA_transferase-like       
IPR001841   Znf_RING       
IPR013017   NHL_repeat_subgr       
IPR013083   Znf_RING/FYVE/PHD       
IPR011042   6-blade_b-propeller_TolB-like       
IPR001258   NHL_repeat       
IPR017907   Znf_RING_CS       
IPR029030   Caspase-like_dom_sf       
IPR018164   Ala-tRNA-synth_IIc_N       
IPR001309   Pept_C14_p20       
IPR015917   Pept_C14A       
IPR016129   Caspase_his_AS       
IPR023033   Ala_tRNA_ligase_euk/bac       
IPR002318   Ala-tRNA-lgiase_IIc       
IPR018165   Ala-tRNA-synth_IIc_core       
IPR012947   tRNA_SAD       
IPR009000   Transl_B-barrel_sf       
IPR018162   Ala-tRNA-ligase_IIc_anticod-bd       
IPR018163   Thr/Ala-tRNA-synth_IIc_edit       
IPR002138   Pept_C14_p10       

SUPFAM

SSF100950   SSF100950        + More
SSF52129   SSF52129       
SSF50447   SSF50447       
SSF101353   SSF101353       
SSF55186   SSF55186       

Gene 3D

2.120.10.30     3.30.40.10    

CDD

cd00032  CASc

ProteinModelPortal

H9JXR7   A0A2A4IVP1   A0A2W1BYS7   A0A2H1W3S1   A0A194QY41   A0A194PNE0   + More
A0A0L7KSD6   A0A1E1WDK5   S4NJ49   A0A212F8H5   A0A0T6B3G9   A0A2J7Q777   A0A2J7Q0P1   A0A067RAL8   A0A1Y1MAI8   A0A1B6KIT7   A0A2P8XWK1   D6WE90   A0A154P361   A0A0L7QXL1   A0A310SS11   A0A0N1ITN9   A0A088A300   A0A2A3EAI2   J3JYZ1   A0A1B6FJ29   N6TI21   A0A1B6DMQ4   Q16Y71   A0A1L8DH95   A0A2J7RLJ4   A0A2D1QUE0   A0A1W4XTK5   A0A023ENL6   A0A182GRX4   U5EGX1   A0A0C9QAW8   W5JAN3   A0A182QYE4   K7IR63   A0A2M4AX14   A0A2M4AXI4   A0A336KB27   A0A2Y9D1P2   A0A182MMQ5   A0A182M2I4   E0VQK7   A0A182ITX0   A0A182WLF5   A0A182P477   A0A084VZ39   A0A0K8TRN4   V5I7V6   A0A182JZW9   A0A224XHY4   A0A2M4AYH9   A0A182FDG5   B0VZB6   A0A2M4BSF1   A0A2M4CHA5   A0A1Q3F7J5   A0A0V0G705   A0A069DR34   E2BEF0   A0A182TBB2   A0A151WW08   A0A2C9GRP0   A0A182UT13   A0A182KQA2   Q7QIW0   C4WSK8   A0A2S2QB19   A0A023F862   A0A0P4VWC3   R4G3D1   A0A151JCU1   A0A182TI45   A0A1I8NTW2   A0A1B6JVW0   E2AAN9   A0A182WWW3   A0A195FX38   A0A2R7VTZ6   A0A182RF50   A0A182YEI2   T1PL17   L7M414   B4KPP6   A0A195ATW1   A0A224ZAT0   A0A131XH90   A0A232F0Z2   A0A131Z1N7   B7PRU5   V5IIL4   A0A3Q0IJ64   A0A1I8NCR6  

KEGG

101744301    no KO assigned | (RefSeq) SAP30-binding protein

GO

GO:0006355   GO:0005634   GO:0044237   GO:0005737   GO:0006419   GO:0004813   GO:0008270   GO:0000049   GO:0005524   GO:0004197   GO:0004842   GO:0016567   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR13464  

Length:

286

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0301

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02599

outside

1  -  286

 

 

Pi

12.464318

Theta

13.206464

Tajima's D

0.12747

CLR

0.539058

CSRT

0.415379231038448

Interpretation

Uncertain