Gene

KWMTBOMO11767

Pre Gene Modal

BGIBMGA004143

Annotation

PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]

Location

Bomo_Chr19(-):14399103-14408640      View in EpiBrowser

Full name

Cysteine and histidine-rich protein 1 homolog      

Location in the cell

Extracellular   Reliability : 2.318 Nuclear   Reliability : 1.675

CDS

ATGGCTGAAGCTCCAGAAAGTGAACCTCCATGTGAGCCATTGCCATCATCAAGCCATGAATTAGTTGCGGCAGAAGTAACGGAAGACGAAGGTCCATTGCCTAAGAGACGTAGAATGCTAGAGGCTGATGCCAGTGAGAGACTCGAGTACAGGCTCGGTGGCATTTTGTGCTGCGCAGTTTGCCTCGATCTGCCCCAATCGGCTGTATACCAGTGCATAAATGGACACCTGATGTGTGTCGCTTGCTTCACTCACTTACTGGCAGATGCCCGTCTCCGTGAGGAGTCTGCTACATGTCCCAACTGTCGTGTCGAAATATCCAAGACGTCAGCCTCCAGGAACTTGGCTGTCGAGAAGACAGTCTCCGAACTGCCATTGGAGTGCAAGTACTGCACTAGCGTGTTCCCGCGACATTCGCTACCTAACCACGAGGAGAATCAATGTGAAGAGAGGTTGACGAGCTGCCGCTTCGCCTGCATCGGGTGTCCGTGGAGAGGGCCGGCCCACGAGGGCGGCGCCCACGAGGCCGCCTGCGCGCACCCCAACAAGTCGGCCGCCGAGGTGCTGGAGGTCATCGCGGAGCGGGAGCGACTGAGCCACGAGACCATGGCCGTCTACAATCAAGTAATGGATCTGCTCTCGTATGAGAAGATCACCTTCACTGACCTGCAGCTGAAGCCGTACCGCCTGGACGAGTTCGTGCACAAGATGTACTACGAGTCGTCGCGCTTCACGGCCTTCTCGCACCAGTGGCTCGTCAAGGCCTTCGTCAACAGAAACCAGCAGGACCCCACCCAGAGCTCCGAGCGCGAGATCACCTACCAGCTGATAATGAAGAGCAAGCCGATGGGCACGTGCACGGTGCAGTGGGTGGTGGTGTCGGGGCCGCTGGGGGAGGCGCGGCTGGCGGCCCGCCTGGCGCACCACGCCTTCTCCGAGCTGCAGCCTGACGCGCCGCCCGCGGTGCTGCCCCTGGTCCGCAGGAGCGACGCCAACAGGCTGCTGGCCAACAAGGCGCTGCACTTTAGGTTAATAATGTTCCTGTGCACAAAATGA

Protein

MAEAPESEPPCEPLPSSSHELVAAEVTEDEGPLPKRRRMLEADASERLEYRLGGILCCAVCLDLPQSAVYQCINGHLMCVACFTHLLADARLREESATCPNCRVEISKTSASRNLAVEKTVSELPLECKYCTSVFPRHSLPNHEENQCEERLTSCRFACIGCPWRGPAHEGGAHEAACAHPNKSAAEVLEVIAERERLSHETMAVYNQVMDLLSYEKITFTDLQLKPYRLDEFVHKMYYESSRFTAFSHQWLVKAFVNRNQQDPTQSSEREITYQLIMKSKPMGTCTVQWVVVSGPLGEARLAARLAHHAFSELQPDAPPAVLPLVRRSDANRLLANKALHFRLIMFLCTK

Similarity

Belongs to the CYHR1 family.

Keywords

Complete proteome   Metal-binding   Reference proteome   Zinc   Zinc-finger  

Feature

chain  Cysteine and histidine-rich protein 1 homolog

Uniprot

A0A2A4IVS5   A0A2A4IUR9   A0A2W1BUE9   A0A151X973   F4W995   A0A3S2L6S0   + More
A0A151IAD2   E2APH4   A0A026WBE8   E9J754   A0A151J3N5   E2B4C5   A0A087ZYE2   A0A0M8ZU15   A0A2J7PHX1   A0A310SF36   A0A195F3X6   A0A0L7RBX1   K7IVF0   A0A3L8DRI0   A0A1W4XI20   A0A1B6EW89   A0A1D2MU66   A0A232EYI0   A0A1S4EE22   T1IJ15   A0A067R1M8   A0A1B6MPP7   A0A154P7C1   A0A224YWJ8   A0A0T6AZA6   D6WMC9   E9FRE0   A0A131XKZ3   A0A1Y1KFY7   A0A0P5JEE0   A0A0P5LZA5   A0A0P5RMD0   A0A0P5ZFY4   A0A0P5W4B3   A0A0K8RQE8   Q16PP0   A0A1S4FU38   A0A023GJ41   A0A165A6E6   G3MM33   T1PA56   A0A0K8V981   A0A1I8MXX7   A0A2M4CQ71   A0A182QFA0   A0A1Q3FLQ0   A0A1B6HXH0   A0A2M4A2K7   A0A2M4A249   A0A2M3Z353   A0A1L8DBK8   A0A1L8DB92   A0A0A1XJ09   A0A034VKF8   A0A2M4BMU2   A0A2M4BN08   A0A2M4BN25   A0A1L8DPL7   A0A182Y4S0   A0A1Y1KGE0   A0A195B519   A0A1E1XET9   A0A1Z5LDW0   A0A2M4BIL6   A0A182UWA5   A0A2M4BIU4   Q7QKC6   A0A1I8NMC9   A0A0P6I122   U5EYI2   B0XGP3   A0A0P6BQJ3   A0A023EUQ1   A0A0P4VUX8   J9K156   A0A2A3E6V5   B4N6I5   A0A2S2QCI2   E0VQQ8   A0A0P5Z8C5   A0A158P113   U4UJQ7   N6TK63   B3M7E7   B4KWL4   B4IYJ4   A0A182M7D6   Q29E32   A0A1W4W262   B4PCV8   A0A3B0JTW0   B3NF25   A0A1B0G8M3   Q9VZV5  

Pubmed

28756777    21719571    20798317    24508170    21282665    20075255    + More
30249741    27289101    28648823    24845553    28797301    18362917    19820115    21292972    28049606    28004739    17510324    22216098    25315136    25830018    25348373    25244985    28503490    28528879    12364791    14747013    17210077    24945155    17994087    20566863    21347285    23537049    15632085    17550304    10731132    12537572    12537569   

EMBL

NWSH01006778    PCG63250.1    PCG63246.1    KZ149915    PZC77981.1    KQ982402    + More
KYQ56838.1    GL888002    EGI69277.1    RSAL01000114    RVE46923.1    KQ978223    KYM96263.1    GL441542    EFN64673.1    KK107293    EZA53273.1    GL768421    EFZ11350.1    KQ980275    KYN17031.1    GL445549    EFN89473.1    KQ435847    KOX71135.1    NEVH01025130    PNF15935.1    KQ769179    OAD52915.1    KQ981855    KYN34877.1    KQ414616    KOC68457.1    AAZX01001177    QOIP01000005    RLU23017.1    GECZ01027547    JAS42222.1    LJIJ01000517    ODM96649.1    NNAY01001638    OXU23350.1    JH430221    KK852779    KDR16693.1    GEBQ01002105    JAT37872.1    KQ434829    KZC07741.1    GFPF01007024    MAA18170.1    LJIG01022514    KRT80174.1    KQ971343    EFA04251.1    GL732523    EFX90213.1    GEFH01000417    JAP68164.1    GEZM01084902    JAV60422.1    GDIQ01203614    GDIP01068357    JAK48111.1    JAM35358.1    GDIQ01166286    JAK85439.1    GDIP01149700    GDIQ01104295    JAJ73702.1    JAL47431.1    GDIP01047373    GDIP01045925    JAM57790.1    GDIP01091262    JAM12453.1    GADI01000501    JAA73307.1    CH477775    EAT36341.1    GBBM01001471    JAC33947.1    LRGB01000642    KZS17230.1    JO842934    AEO34551.1    KA644823    AFP59452.1    GDHF01016790    JAI35524.1    GGFL01003237    MBW67415.1    AXCN02001214    GFDL01006506    JAV28539.1    GECU01028352    JAS79354.1    GGFK01001557    MBW34878.1    GGFK01001555    MBW34876.1    GGFM01002172    MBW22923.1    GFDF01010354    JAV03730.1    GFDF01010353    JAV03731.1    GBXI01002978    JAD11314.1    GAKP01016916    GAKP01016914    JAC42038.1    GGFJ01005201    MBW54342.1    GGFJ01005202    MBW54343.1    GGFJ01005200    MBW54341.1    GFDF01005682    JAV08402.1    GEZM01084911    JAV60414.1    KQ976598    KYM79591.1    GFAC01001572    JAT97616.1    GFJQ02001378    JAW05592.1    GGFJ01003731    MBW52872.1    GGFJ01003730    MBW52871.1    AAAB01008799    EAA03758.4    GDIQ01010982    JAN83755.1    GANO01000341    JAB59530.1    DS233048    EDS27737.1    GDIP01026349    JAM77366.1    GAPW01001409    JAC12189.1    GDRN01095001    GDRN01094999    JAI59622.1    ABLF02040082    KZ288369    PBC26771.1    CH964161    EDW79974.1    GGMS01006252    MBY75455.1    DS235430    EEB15714.1    GDIP01048915    JAM54800.1    ADTU01001037    KB632333    ERL92723.1    APGK01035368    KB740923    ENN78298.1    CH902618    EDV39845.1    CH933809    EDW19643.1    CH916366    EDV97667.1    AXCM01000419    CH379070    EAL30231.2    CM000159    EDW93862.1    OUUW01000002    SPP77129.1    CH954178    EDV50367.1    CCAG010000281    AE014296    AY052026   

Proteomes

UP000218220    UP000075809    UP000007755    UP000283053    UP000078542    UP000000311    + More
UP000053097    UP000078492    UP000008237    UP000005203    UP000053105    UP000235965    UP000078541    UP000053825    UP000002358    UP000279307    UP000192223    UP000094527    UP000215335    UP000079169    UP000027135    UP000076502    UP000007266    UP000000305    UP000008820    UP000076858    UP000095301    UP000075886    UP000076408    UP000078540    UP000075903    UP000007062    UP000095300    UP000002320    UP000007819    UP000242457    UP000007798    UP000009046    UP000005205    UP000030742    UP000019118    UP000007801    UP000009192    UP000001070    UP000075883    UP000001819    UP000192221    UP000002282    UP000268350    UP000008711    UP000092444    UP000000803   

PRIDE

Q9VZV5   

Pfam

PF02176   zf-TRAF        + More
PF03145   Sina

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR008974   TRAF-like       
IPR039338   CYHR1       
IPR001841   Znf_RING       
IPR001293   Znf_TRAF       
IPR018121   7-in-absentia-prot_TRAF-dom       

SUPFAM

SSF49599   SSF49599       

Gene 3D

3.30.40.10    

ProteinModelPortal

A0A2A4IVS5   A0A2A4IUR9   A0A2W1BUE9   A0A151X973   F4W995   A0A3S2L6S0   + More
A0A151IAD2   E2APH4   A0A026WBE8   E9J754   A0A151J3N5   E2B4C5   A0A087ZYE2   A0A0M8ZU15   A0A2J7PHX1   A0A310SF36   A0A195F3X6   A0A0L7RBX1   K7IVF0   A0A3L8DRI0   A0A1W4XI20   A0A1B6EW89   A0A1D2MU66   A0A232EYI0   A0A1S4EE22   T1IJ15   A0A067R1M8   A0A1B6MPP7   A0A154P7C1   A0A224YWJ8   A0A0T6AZA6   D6WMC9   E9FRE0   A0A131XKZ3   A0A1Y1KFY7   A0A0P5JEE0   A0A0P5LZA5   A0A0P5RMD0   A0A0P5ZFY4   A0A0P5W4B3   A0A0K8RQE8   Q16PP0   A0A1S4FU38   A0A023GJ41   A0A165A6E6   G3MM33   T1PA56   A0A0K8V981   A0A1I8MXX7   A0A2M4CQ71   A0A182QFA0   A0A1Q3FLQ0   A0A1B6HXH0   A0A2M4A2K7   A0A2M4A249   A0A2M3Z353   A0A1L8DBK8   A0A1L8DB92   A0A0A1XJ09   A0A034VKF8   A0A2M4BMU2   A0A2M4BN08   A0A2M4BN25   A0A1L8DPL7   A0A182Y4S0   A0A1Y1KGE0   A0A195B519   A0A1E1XET9   A0A1Z5LDW0   A0A2M4BIL6   A0A182UWA5   A0A2M4BIU4   Q7QKC6   A0A1I8NMC9   A0A0P6I122   U5EYI2   B0XGP3   A0A0P6BQJ3   A0A023EUQ1   A0A0P4VUX8   J9K156   A0A2A3E6V5   B4N6I5   A0A2S2QCI2   E0VQQ8   A0A0P5Z8C5   A0A158P113   U4UJQ7   N6TK63   B3M7E7   B4KWL4   B4IYJ4   A0A182M7D6   Q29E32   A0A1W4W262   B4PCV8   A0A3B0JTW0   B3NF25   A0A1B0G8M3   Q9VZV5  

KEGG

101737674    no KO assigned | (RefSeq) cysteine and histidine-rich protein 1-B

GO

GO:0046872   GO:0008270   GO:0016301   GO:0006511   GO:0007275   GO:0005634   GO:0005515   GO:0004842   GO:0016567   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR23059  

Length:

351

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01773

Exp number, first 60 AAs:

0.00536

Total prob of N-in:

0.00363

outside

1  -  351

 

 

Pi

16.763182

Theta

14.350439

Tajima's D

-1.207192

CLR

16.915553

CSRT

0.100494975251237

Interpretation

Uncertain