Gene

KWMTBOMO11763  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004145

Annotation

PREDICTED:_ran-binding_protein_10_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(-):14323406-14337080      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.558 Nuclear   Reliability : 1.341

CDS

ATGCTGAAGGAACTGCGCGCCCGGACCAGGGTCGCCATCGACGAGTTCCCGCTGCCCGACGAGCAGGGACAGTGGCAGCAGGTGTTGCACAGGATGGTGTCGACGTACCTGGTGCACCACGGGTACTGCAGCACGGCGCAGGCCTTCTCCCGCGCCACCGGACAGCCCATAGACGAGGATATAGCGTCTATTAAAAACAGACAGAGGGTGTCGAAGCTGGTGCTGGCGGGGCGCGTGGGCGAGGCCGTGGAGACCACGCGGCGCCTGTGGCCCGGCCTGCTGGAGCGCGACCCCGATCTGCTGTTCCTGCTCAAGTGCAGGCAGTTCGTAGAGATGGTCAACGGCACCGACTGCGAGGCGAGCGAGGACGGCGCCAACGGAGTGGCCACCTCCGTCATCTCGCACACCGGCCGCCCGCACAAGCGCAGCAATGGCGTGGCGGCGGACGCGGCGGAGGAGGGCGGCGGGCGCGACGTGGACATGGCGCCCGCCGCCAACGGAGACCACGAAGGTGACCACTGCGCTCTACACCCCACACCACGTTACACGATATATCTTGAAGTGCGAGGGAAAGAGAGAGAGAGAGAGAGAGAGAGTGGGCTGGTTGTAGATGAGGCGCTGCCGCTCGTGAAGGGGATGCCGGGGGTGACGGCCAGCGTTGCCGCCCTGCTGCCGGACCGGTTCGAGGCGGACGCGAGCAGCCAGCGCGCCTCCGTGGAGAGGATGCTGGCCTTCGGGCGCGAGCTGTACGCCATGAGCCAGAAGCTGAGCCAGGACCTGTACCACAAGTCCATGCTGGAGGACGCCTTCAGCCTGCTGGCCTACAGCAACCCGTGGGACAGTCCCGTGGGCTGGCAGCTGGAGCCGGTGCGCCGGGAGGCTGTCTGCGACGCGCTCAACTCCGCCATACTCGAGTCCCAGGGCATGCAGTGGTCGTCCCCCGTGGAGGCCTGCGTGTCGCACGCGCGCTCCCTGCTGCGCCGCATGTCGCGCGCCTCCCTCGGGGCCTGCGCCTTCGCCGACCTGTCCGCCCTGCTCGCGCGCTGA

Protein

MLKELRARTRVAIDEFPLPDEQGQWQQVLHRMVSTYLVHHGYCSTAQAFSRATGQPIDEDIASIKNRQRVSKLVLAGRVGEAVETTRRLWPGLLERDPDLLFLLKCRQFVEMVNGTDCEASEDGANGVATSVISHTGRPHKRSNGVAADAAEEGGGRDVDMAPAANGDHEGDHCALHPTPRYTIYLEVRGKERERERESGLVVDEALPLVKGMPGVTASVAALLPDRFEADASSQRASVERMLAFGRELYAMSQKLSQDLYHKSMLEDAFSLLAYSNPWDSPVGWQLEPVRREAVCDALNSAILESQGMQWSSPVEACVSHARSLLRRMSRASLGACAFADLSALLAR

Uniprot

A0A2A4JKP0   A0A3S2LYH5   B7Q7P9   B0VZB5   A0A131XA99   A0A131XSN9   + More
A0A131YZ32   L7M1Q7   A0A224YYU2   A0A1E1XCM3   Q7PPZ9   A0A1E1XK35   A0A1Q3F739   A0A3L8DL51   A0A182LB69   A0A026WA93   E9IMD1   A0A158NCM8   G3MJH1   A0A195FA71   A0A151X6B4   F4WFE0   D6WMD1   A0A2B4S914   A0A3B4AWE1   A0A182X0V7   A0A182UKC1   A0A182HPC6   A0A182V8P8  

Pubmed

28049606    26830274    25576852    28797301    28503490    12364791    + More
14747013    17210077    29209593    30249741    20966253    24508170    21282665    21347285    22216098    21719571    18362917    19820115    25463417   

EMBL

NWSH01001243    PCG71993.1    RSAL01000111    RVE47059.1    ABJB010601621    ABJB010756337    + More
ABJB010895676    ABJB010952179    ABJB011017402    DS876757    EEC14871.1    DS231813    EDS25691.1    GEFH01004027    JAP64554.1    GEFM01005473    JAP70323.1    GEDV01004108    JAP84449.1    GACK01006783    JAA58251.1    GFPF01010959    MAA22105.1    GFAC01002196    JAT96992.1    AAAB01008900    EAA09482.5    GFAA01003789    JAT99645.1    GFDL01011706    JAV23339.1    QOIP01000007    RLU20923.1    KK107364    EZA51949.1    GL764129    EFZ18407.1    ADTU01011967    JO842022    AEO33639.1    KQ981727    KYN36944.1    KQ982490    KYQ55818.1    GL888115    EGI67191.1    KQ971343    EFA04252.1    LSMT01000163    PFX24955.1    APCN01002971    APCN01002972    APCN01002973   

Proteomes

UP000218220    UP000283053    UP000001555    UP000002320    UP000007062    UP000279307    + More
UP000075882    UP000053097    UP000005205    UP000078541    UP000075809    UP000007755    UP000007266    UP000225706    UP000261520    UP000076407    UP000075902    UP000075840    UP000075903   

PRIDE

B7Q7P9   

Pfam

PF10607   CLTH        + More
PF00622   SPRY
PF08513   LisH

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR024964   CTLH/CRA       
IPR001870   B30.2/SPRY       
IPR006595   CTLH_C       
IPR035782   SPRY_RanBP9/10       
IPR013144   CRA_dom       
IPR003877   SPRY_dom       
IPR006594   LisH       

SUPFAM

SSF49899   SSF49899       

CDD

cd12909  SPRY_RanBP9_10

ProteinModelPortal

A0A2A4JKP0   A0A3S2LYH5   B7Q7P9   B0VZB5   A0A131XA99   A0A131XSN9   + More
A0A131YZ32   L7M1Q7   A0A224YYU2   A0A1E1XCM3   Q7PPZ9   A0A1E1XK35   A0A1Q3F739   A0A3L8DL51   A0A182LB69   A0A026WA93   E9IMD1   A0A158NCM8   G3MJH1   A0A195FA71   A0A151X6B4   F4WFE0   D6WMD1   A0A2B4S914   A0A3B4AWE1   A0A182X0V7   A0A182UKC1   A0A182HPC6   A0A182V8P8  

KEGG

101735366    K23334 Ran-binding protein 9/10 | (RefSeq) ran-binding protein 10

GO

GO:0005515   GO:0016787   GO:0006468   GO:0005615   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05426

Exp number, first 60 AAs:

0.00315

Total prob of N-in:

0.05364

outside

1  -  348

 

 

Pi

16.519306

Theta

20.876826

Tajima's D

-0.562933

CLR

1.061294

CSRT

0.225688715564222

Interpretation

Uncertain