Gene
KWMTBOMO11756
Pre Gene Modal
BGIBMGA014357
Annotation
gag-pol_polyprotein?_partial_[Lasius_niger]
Location in the cell
Nuclear Reliability : 3.223
Sequence
CDS
ATGGATTCTACAATTTATGCAGCCAATGATGAAAAAATGAAAGCACAAGGTTCAGGTACTGTCCATGGAATGTCATGCGATTTACAAAAGACTTTATTTATACCAGACTTAGCACAAAACCTTTTGTCTGTAAATTGTGTTACCAACAATAATGGCTCTGTTGTGTTCACAAAGAATAAAGTGGAGATTTACAAAAATTCAAAATTAATTTTAACCGGCAAAAAAGAAAATGGCTTATACAGGGTGAATTTAGTACAAGACCTGAAAAATGAAAATAAATCCTTACTTACACAAGTAAACGGAACAGCATTGGAATGGCATGCAAAACTGGGACACCCAGATAAATCAGTACTAGAAACACTAACAAAAGTGGCAGACGGCATTAATATACAAGGACCAAAAGTATTACAAGAACAGTGTAAAATATGTGCTGAAGCAAAACAGTCAAGACTACCATTTAATACAATCAGAACTCGTGCTGAAAGACTACCAAGTCATGCCCTAAAAAACAAAACACCATATGAAATGTGGGTTGGAAAAAAGCCTAATATATCTAATATGCAAAAGTTTGGTTCTACTGTCTATGCAAAACAGTTACATCCAAATGTAAAGAAACTGGATCCTAGAAGCAAGAAACTGATAATGATTGGATACACTAATAATGGGTACAGACTGTGGAATGACAAGGAGAGAAAAATAGAGATATCAAGGGACATGGTGATAGTAAAAAGTGAAACTGAACAAAAGAAAGAAAACTATAAGAAAATAAATAATAATAAAAGTGAAAATGATGAAAAAGAGACAACAGAAAACCAGGAAGAGACAACAGAAAACCAGGAAAAGACTACAGAAAACCAGGAACAGATTACAGAAAAGCAGGAAGAGACAACAGAAGATACCAGAACAGAAGAAAATAAAAATGATGAGACTTTTGAAGATGTAGTTTCAGAAACTGAATCAGAAGACACACAAAGAGAAAGAAACAGACAGAATGAAGAAGATGGTTACCTAAGAAGAAGCAAGAGAATTAGACACATACCAATACATTTAAGAGACTACAGTTTACTTACTTACAGAGAGGCTGTAACATCTAAAGAGGGAGAAAACTGGGAGAAGGCCATAAATTCGGAGAAGGAATCCTTGGAAATCAATAATACCTGGGAAATAGTAGACAAGAAAGAGGCAAAAGATAGTAAAATACTTACAAACAAATGGGTATTCCGTGTGAAAGATAATGGCACTTATAAAGCTAGACTTGTTGTACGAGGATTTGAACAAAACAGTATTGACTACAATGAAATATACAGTCCAGTTGTCAGTCAGTTAACTTTAAAATCTTTATTTGCACTTGCTGCTTCTAAAGACTATAACATGATGACATTTGATGTTAAGACTGCATTTTTATATGGAGAGCTGGAAGAAAATGTGTATATGAATATACCGGATGGATATGAAAAACAACCTGGGAAATTTTGTCGATTAAAGAAATCCTTATATGGACTAAAACAAGCTCCTATTACATGGAACAAAAGATTTACAAAAGCAATGTTAAAACTTGGTTTAAAAGCTACTAAAACAGACCAGTTTGTATTTACAAATGAAGATAATACAATAATAATAGCAATCTATGTAGATGATGGACTTGCTTTGGCTAAAGAAAAGCAAACATTAAAAAACATTTTAAACTGCCTAGAAAAGGAATTTGAAATAAAAGTATACAATGATCCTACTACTTTTATTGGATTTGAAGTCAAGAAGACTGAGAAAGGTATAACACTGAAACAAGAAAGCTACATTGGAAACTTATTAAAGAAATTTAGTATGGAAGATTCTAAACCTGTTAAGACACCCTGCAATACAGAAAATAAAACAGAAACGCAAAACACAGATACTATAAATTTTCCATATAGAGAACTGATTGGAGGACTTCTATATGTATCTACAAGAACAAGGCCGGACATAAGTCAAGCTGTAAATGAAGCAAGCAGAAAAATAGAAAACCCTACAAAAGATGATGTGATAGCTGCAAAGAAAATACTAAAATATTTAAATGGAACAAGACAGAAAGGAATCATGTACAAGAAAGGAGGAGATATGTCAAAACTAAATGCATACTGTGATGCAGACTATGCCAATTGTAACAAGACAAGACGCAGTACAACCGGATTTGTGATAATGTTAGCAGAAGGACCTGTGTCTTGGTGTTCAAAACGACAACCAATCGTTGCATTATCATCAACTGAAGCAGAGTATATTGCAGCAGCTGATTGCTGTAAGGAATGCTTATATTTAAGGTCATTTTTAAAGGAGTTGATTGGTTCTGAAGTTGAAATTACATTAAATGTTGATAACCAAAGCGCTATTCAGCTGATCAAAACAGGAGAAGGTGTTAGTGGGTACATCCCTATTAAGAAGTGTGAGCTGTATGTAGCACGACACTAG
Protein
MDSTIYAANDEKMKAQGSGTVHGMSCDLQKTLFIPDLAQNLLSVNCVTNNNGSVVFTKNKVEIYKNSKLILTGKKENGLYRVNLVQDLKNENKSLLTQVNGTALEWHAKLGHPDKSVLETLTKVADGINIQGPKVLQEQCKICAEAKQSRLPFNTIRTRAERLPSHALKNKTPYEMWVGKKPNISNMQKFGSTVYAKQLHPNVKKLDPRSKKLIMIGYTNNGYRLWNDKERKIEISRDMVIVKSETEQKKENYKKINNNKSENDEKETTENQEETTENQEKTTENQEQITEKQEETTEDTRTEENKNDETFEDVVSETESEDTQRERNRQNEEDGYLRRSKRIRHIPIHLRDYSLLTYREAVTSKEGENWEKAINSEKESLEINNTWEIVDKKEAKDSKILTNKWVFRVKDNGTYKARLVVRGFEQNSIDYNEIYSPVVSQLTLKSLFALAASKDYNMMTFDVKTAFLYGELEENVYMNIPDGYEKQPGKFCRLKKSLYGLKQAPITWNKRFTKAMLKLGLKATKTDQFVFTNEDNTIIIAIYVDDGLALAKEKQTLKNILNCLEKEFEIKVYNDPTTFIGFEVKKTEKGITLKQESYIGNLLKKFSMEDSKPVKTPCNTENKTETQNTDTINFPYRELIGGLLYVSTRTRPDISQAVNEASRKIENPTKDDVIAAKKILKYLNGTRQKGIMYKKGGDMSKLNAYCDADYANCNKTRRSTTGFVIMLAEGPVSWCSKRQPIVALSSTEAEYIAAADCCKECLYLRSFLKELIGSEVEITLNVDNQSAIQLIKTGEGVSGYIPIKKCELYVARH
Summary
Uniprot
ProteinModelPortal
Ontologies
KEGG
GO
Topology
Length:
813
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00127
Exp number, first 60 AAs:
0.00052
Total prob of N-in:
0.00016
outside
1 - 813
Population Genetic Test Statistics
Pi
13.955644
Theta
25.903319
Tajima's D
-1.374714
CLR
2.998733
CSRT
0.0759962001899905
Interpretation
Uncertain
