SGID The Silkworm Genome Information Database
Gene
KWMTBOMO11753
Pre Gene Modal
BGIBMGA004155
Annotation
hypothetical_protein_RR48_09536_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 1.314 PlasmaMembrane   Reliability : 1.792
 

Sequence

CDS
ATGTGTGATTTGGAAATTTTAAAATTAGAATCTAGAACAATCACATCGTCCGGCATGGTCGAATCATACTTAAAACAACATTCCGAGTTTCGTTCAATTAATGTTTGGAAAACCTGGTCCTCAGACAATGAAGATCATCATGTTGTATGCTATGGTAAAAAAATACACTACCATAAATTTATGACACTTAATAATGAAAGTATTACACAATACAAACATTTGGAAACAATGGATGAAAGGAAAAAAGCCTTGAAGAAATTAGCGAAATTATTAGATGAAAAAACTAATTTAATTTGTGAAATGGAATTCTACACAAGGAAACAGTCTGAGAATGATGTTAGAACATATTTAAACCTGATAAAACAACAGTTTGAGTTGCAAAACATAGAACACCATTCAGGGAAGATGAAACCATTTGTGTGCATAGACGGCAACACTCCGCTATTATATTTGGGTTTCTTGCAAAGGATTATTTATTTCTTGGGCCGTTTCTGCATATACACAACACCAGAAATGGCTCCAATTTGTACTCTCTTCATGGAAATGGCACACGAGGCTGGCTTCAAAGACTATTCGTCGCTAATCATTCTCGACAAAATAAACGAAGGCAAATTACAAGACTTAAATGGAGTGAATGGTTTTCAATCGGGAACCACTGCTGTTGTCACAGCCCGGTGCGATCTGGACTCTGCCGTTGACATGTTCATCGCTTCGTCACCAAATGCACCCTGGAGACTGCGATCTATTTTAGTGCAGGAAAACGTGTACGACCATTTCAAAAGAGCCATGAAGTGGAAACACGACTTGGGATGCTCGGAGAAAAAGCCGGGTATCGAAATAAGTGACCTTACGTACGAAATCAAGGGGAAAAAGTTTATCTTCGATTACACGGGGCGCGGTGACGCCGCCGGAATCACGATAGAAGCCTACAGGACAACAAAAGAGCTGTTGCAGTTGCTGGACAATTGCAAACCTTATTACCTCAGCTTATGGGCCAGCGACGTGGCCGAAGCGGACGAGGTTGCTCTGAAATGTTGCTCGAACGTCGTTTGGTCGAACGATCTTGCCAATTTCGCGTCTCCCGTTGCACTTTTCAATTTAATATTCCCTATTCGTGTCCGAAACGCGGAAAATGGCGACGAAATTAAAGAATTAGTCAAGGATTGGACTAAATTAAGTTTCGGTGAACGTAAACATGCCTTACTGACTTCGCTGCAAGGGTACATAGGGGGCATTGAGTCGAACGCCGAGACGTACCGCGCGAATGAGTTCGCTCAGAGATTAGTCGACGAACAATCTGGTTCTTTAATTACACACGGTAACGTGTTAATTAAGGTCTTGAAGAGAACTACCGAACTGCGTCCTATGGTCGAGGACTTTTCGTATGAATGCATCCGGTCAGCTTTGTTTGGCCTCGGTACCGTTGTCGATAAGATTGAGGATGGCTTGTTGGAAGCGTTTAAGGCGAACGGCGTGCCGATCTCGCGTCCCACTATACCGATTGTCGGTTACTGGACAGCTCTGTACAGATACAAATTGATTTGGTCCAGTTACGGTACGATATTCGCTAATTGA
Protein
MCDLEILKLESRTITSSGMVESYLKQHSEFRSINVWKTWSSDNEDHHVVCYGKKIHYHKFMTLNNESITQYKHLETMDERKKALKKLAKLLDEKTNLICEMEFYTRKQSENDVRTYLNLIKQQFELQNIEHHSGKMKPFVCIDGNTPLLYLGFLQRIIYFLGRFCIYTTPEMAPICTLFMEMAHEAGFKDYSSLIILDKINEGKLQDLNGVNGFQSGTTAVVTARCDLDSAVDMFIASSPNAPWRLRSILVQENVYDHFKRAMKWKHDLGCSEKKPGIEISDLTYEIKGKKFIFDYTGRGDAAGITIEAYRTTKELLQLLDNCKPYYLSLWASDVAEADEVALKCCSNVVWSNDLANFASPVALFNLIFPIRVRNAENGDEIKELVKDWTKLSFGERKHALLTSLQGYIGGIESNAETYRANEFAQRLVDEQSGSLITHGNVLIKVLKRTTELRPMVEDFSYECIRSALFGLGTVVDKIEDGLLEAFKANGVPISRPTIPIVGYWTALYRYKLIWSSYGTIFAN

Summary

Interpro
IPR016161   Ald_DH/histidinol_DH        + More
IPR011408   Aldehyde_DH       
IPR016163   Ald_DH_C       
SUPFAM
SSF53720   SSF53720       
Gene 3D

Ontologies

Topology

Length:
524
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.3105
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00509
outside
1  -  524
 
 

Population Genetic Test Statistics

Pi
27.405099
Theta
26.967148
Tajima's D
-0.211269
CLR
0.703429
CSRT
0.31878406079696
Interpretation
Uncertain
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