SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11746
Pre Gene Modal
BGIBMGA004199
Annotation
PREDICTED:_DNA_repair_protein_RAD52_homolog_isoform_X2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.931
 

Sequence

CDS
ATGGCCAGCGAGACGGAGGCCGCCAGGGCCGAGAGGAAACGGCGCCAGAAATTAGCGCAAGAGGAGTTCAGATTGAAACAGATGATGAAGAGCAATGATCAGGCTGATCAGAGGCAAGATGTAAGCAAAGCTAGCAGCAGTTTTGACAGGCTGCTCCTTAATCTCCCAAGTCAAGATATTTTGATCGAAGATACGGCACCCAACGGTGGCGACGGCAAGAGGAAGTCTCCGGGTCCCGACAGTGGCGCCAAGCGACGTAACAGCTTCAACAAATTGAATATTGTACAACATAAATGA
Protein
MASETEAARAERKRRQKLAQEEFRLKQMMKSNDQADQRQDVSKASSSFDRLLLNLPSQDILIEDTAPNGGDGKRKSPGPDSGAKRRNSFNKLNIVQHK

Summary

Pfam
PF04098   Rad52_Rad22
Interpro
IPR007232   Rad52_Rad59_Rad22        + More
IPR041247   Rad52_fam       

Ontologies

Topology

Length:
98
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.45694
outside
1  -  98
 
 

Population Genetic Test Statistics

Pi
19.940058
Theta
16.458067
Tajima's D
0.646801
CLR
0.489274
CSRT
0.575721213939303
Interpretation
Uncertain
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