Gene

KWMTBOMO11744

Pre Gene Modal

BGIBMGA004197

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr19(+):13143414-13150359      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Nuclear   Reliability : 4.567

CDS

ATGCAGACAATATCCGATCCTAAGTGTGATTTAGAAGAGTCCAATAACCTTTCGCATGTAGAAAAAGATGACGATGATAGCGACGATGAGACTGCAGGCTTTGCAACATTGAAGTTGGAAGCAGCTAAACTCCGACATTTCTTGACCAATGAAGAAGAAACGGAAGACGGCCTACCGGTGTTCTGTAACAGAGTTCAAAAAGAACTTGATGGTACACGTAAAGAAGTTGGGAGACATGCAATAAATAAGCTAAAGACAGAAGAACTAGAATTTGATGTTCCTCCCGATACAGTAATTGAATTTGCCGCATTGAGTAACACCGAGGAGATGTGCTCAGATATTGATAATAATATCATACAAAAATGCAAAGAAACTCCACCGTCAGAGGATTCAAATATAAGCACGTTTATTTCGTGTGGTGTGATGGAAGAGTACCTCGATAAGAACCTAACTATTAAGGTGAAGATAGAAAATAATGACGAAACTCAATCTTTAGACAGTAAGACGGGGCTTGACGAGGAGTATTTCGCTTCGGAGAGAGTAAAAATTGAATATGAAGATACATCTATATCGATATCTCCTCATCTCTGCTCCTGGTCTGAAGATTTTTCGACATTTCAAAGTGCTCAAGAAGCGTACACACGGACCCCGGGTACGAACACAACATCTGAAGAACACGTCGACATTTTTCTTAATATTTGGGATCAAACTATTTTGGAGCAGATAGTGCAAGAAACTAACCGATATGCGTCGCAAGCTGTCACTGACGCTTCTGAAGGGATCGACTCCAATCCAAAGCCCTTGGAGTGGGAGGAAACCACAGTCGAGGAGCTATATCGGTTCTTTGCAGTTCTCATTTACATGTCGATGTGCGTGAGGGCGTCCCTCCGAGAGTACTGGATGTCGGGAGTACTAGGCATGCCGACCTTCCGAAACATCATGTCTGAGACCAGATTCCGTGTATTATTAAAGTTTCTTTATTTCTCTAAAGACAATAACGAAACTACACTCGTCGATTCCCACGAAAGAGAAATGTCCAAAATAAATCCTATAGTCGAGCATTGTAACGATAAATTTTCAAGTTTGTATGTCCCTTTAAAACATCTTAGTGTAGGCGAATCGTTTATTCATATGAGCGACAGAGGTGCCTTGCCGCGCTGCAAACAAAGTAATGAAAATCAACGCATCAAGTGTTTAGAACTATGCGAAGCAGAAACTGGGTATTTGCTCAAGTGCGTCATGTTTACAGAGAAAGACTACACAGTGTTCGAAAAGTCCAAAGACAGATCGCAAGACAAATTCTCTGGGCATGTTCTCAAACTGCTGGACGGATACCTCGACGTGGGTCACGTGGTGGTCGTGGACAAATGGCACAGCCAGCTGCAACTGGCGCGATACCTCAAGTCGCGACGCACTGACGTCATCGGCTCGATCTGTCGGCAAAATGCTCAACTACCTCGAGAGATCAAATCTATCAACGAAACTAACCTACAGAGCGGAGGCTGCATCGCTGTGCACTGCGGGGATGTCGCGTTAATCACTTGGAAAGACGTAACATTGTTATCGACTTATCACAAAGACTTAAACGTCTTAAAAGCATCTAGCAACACACCGACACCATCAATTGTTTTGGACTATAACAAATACATGAGAGGAGTGGACATCAAAGATCAGAAGCTATCCGCGTATCTTTTCGAAGGACGGCGAGGCGTTAAACGAATTGCTGAAGATTTGCTCCGTCGTTTCCCGCGGTGCTCTGTGACGCGACCTCCGAGCCTCCCAACCACGGCCCCAGATTTAGAGGCGACTCATTTTCCTGTGCTGATTAAGACCGGTTCTGGATCGGGCAGCAAGAGACGACGCTGCGTCTGCTGCCAAGTCGCTGGAAGAAAGAAGTTTGTGGCGCAGATGTGCAGTGGATGTGACGCGCCGCTCTGCGTGGGGAAGTGTTGGGCTGATTATCACACTTCCTCAAGTTCGAAGGAACTGAAGTGA

Protein

MQTISDPKCDLEESNNLSHVEKDDDDSDDETAGFATLKLEAAKLRHFLTNEEETEDGLPVFCNRVQKELDGTRKEVGRHAINKLKTEELEFDVPPDTVIEFAALSNTEEMCSDIDNNIIQKCKETPPSEDSNISTFISCGVMEEYLDKNLTIKVKIENNDETQSLDSKTGLDEEYFASERVKIEYEDTSISISPHLCSWSEDFSTFQSAQEAYTRTPGTNTTSEEHVDIFLNIWDQTILEQIVQETNRYASQAVTDASEGIDSNPKPLEWEETTVEELYRFFAVLIYMSMCVRASLREYWMSGVLGMPTFRNIMSETRFRVLLKFLYFSKDNNETTLVDSHEREMSKINPIVEHCNDKFSSLYVPLKHLSVGESFIHMSDRGALPRCKQSNENQRIKCLELCEAETGYLLKCVMFTEKDYTVFEKSKDRSQDKFSGHVLKLLDGYLDVGHVVVVDKWHSQLQLARYLKSRRTDVIGSICRQNAQLPREIKSINETNLQSGGCIAVHCGDVALITWKDVTLLSTYHKDLNVLKASSNTPTPSIVLDYNKYMRGVDIKDQKLSAYLFEGRRGVKRIAEDLLRRFPRCSVTRPPSLPTTAPDLEATHFPVLIKTGSGSGSKRRRCVCCQVAGRKKFVAQMCSGCDAPLCVGKCWADYHTSSSSKELK

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

H9J3V8   A0A3S2NSV7   A0A3S2M360   A0A2A4ITI3   A0A2A4JR95   A0A2A4IYX3   + More
A0A2W1BDM1   A0A2A4K616   A0A3S2TBD2   A0A2J7QSN3   A0A194RRT0   A0A2W1B9N8   A0A2A4IY54   A0A2J7PIK3   A0A2J7Q6H1   A0A2J7PD69   A0A2J7QZK8   A0A3S2TTE3   A0A3S2LRG0   A0A0K0E1W0   A0A2H1V5F3   A0A2J7Q8N9   A0A1Y1NAK0   G7PAN9   A0A1D5R1S0   K7DKZ9   H2NMQ4   G7MWA2   A0A2K5PIR4   A0A2K6S7R1   G3QWT8   Q96DM1   A0A2K5KZS5   A0A2K5BXT0   H9F6U8   A0A2K6JV20   A0A2K5UF88   A0A2K6NHE6   A0A2K5XAW3   A0A096NT85   A0A2K6ALX5   F7FDY8   A0A147BEZ3   L7M1S0   A0A2W1BNR3   A0A0D9SEG0   A0A2K5HN84   A0A1S3QP94   E2B4V1   A0A090X8N5   A0A2J7Q696   J9K770   A0A060WWG9   A0A147BD88   A0A3Q0JNJ9   A8J4K3   A0A087TLT3   A0A2Y9RRK0   A0A226D2G8   A0A1B6H7X0   A0A2J7RLZ2   J9JV15   A0A2J7RLZ6   A0A1A9WYG9   A0A1B6E873   A0A1B6HI21   A0A1A9WYH0   A0A226F854   A0A1A9ZX35   A0A087TRV5   A0A226EJ94  

Pubmed

19121390    28756777    26354079    28004739    22002653    17431167    + More
16136131    22398555    14702039    16572171    25319552    25362486    29652888    25576852    20798317    25970599    24755649    17934208   

EMBL

BABH01028864    RSAL01000097    RVE47692.1    RSAL01000056    RVE49901.1    NWSH01008683    + More
PCG62453.1    NWSH01000726    PCG74565.1    NWSH01005160    PCG64390.1    KZ150113    PZC73302.1    NWSH01000091    PCG79681.1    RSAL01001012    RVE40990.1    NEVH01011876    PNF31583.1    KQ459989    KPJ18766.1    KZ150197    PZC72319.1    NWSH01005605    PCG64100.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NEVH01026393    PNF14286.1    NEVH01009069    PNF34004.1    RSAL01000003    RVE54733.1    RSAL01000024    RVE52239.1    ODYU01000749    SOQ36006.1    NEVH01016950    PNF24933.1    GEZM01013350    GEZM01013349    GEZM01013347    GEZM01013346    GEZM01013345    GEZM01013342    JAV92637.1    CM001282    EHH62949.1    JSUE03037923    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    ABGA01233763    NDHI03003689    PNJ08370.1    CM001259    EHH27175.1    CABD030095328    AK057200    AK094816    AK289491    AC079203    JU326601    AFE70357.1    AQIA01062119    AHZZ02030739    GEGO01006047    JAR89357.1    GACK01007981    JAA57053.1    PZC73303.1    AQIB01116437    GL445643    EFN89283.1    GBIH01001829    JAC92881.1    NEVH01017534    PNF24104.1    ABLF02021061    FR904761    CDQ71327.1    GEGO01007089    JAR88315.1    AB300556    BAF82019.1    KK115799    KFM66072.1    LNIX01000039    OXA39353.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    NEVH01002584    PNF41851.1    ABLF02019804    PNF41852.1    GEDC01003168    JAS34130.1    GECU01033435    GECU01003618    JAS74271.1    JAT04089.1    LNIX01000001    OXA65036.1    KK116466    KFM67844.1    LNIX01000003    OXA57084.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000235965    UP000053240    UP000035681    + More
UP000009130    UP000006718    UP000002277    UP000001595    UP000233040    UP000233220    UP000001519    UP000005640    UP000233060    UP000233020    UP000233180    UP000233100    UP000233200    UP000233140    UP000028761    UP000233120    UP000008225    UP000029965    UP000233080    UP000087266    UP000008237    UP000007819    UP000193380    UP000079169    UP000054359    UP000248480    UP000198287    UP000091820    UP000092445   

PRIDE

H9J3V8    Q96DM1   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2
PF00096   zf-C2H2

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR018159   Spectrin/alpha-actinin       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR000315   Znf_B-box       
IPR013519   Int_alpha_beta-p       
IPR000413   Integrin_alpha       
IPR028994   Integrin_alpha_N       

SUPFAM

SSF57667   SSF57667       

Gene 3D

2.130.10.130    

ProteinModelPortal

H9J3V8   A0A3S2NSV7   A0A3S2M360   A0A2A4ITI3   A0A2A4JR95   A0A2A4IYX3   + More
A0A2W1BDM1   A0A2A4K616   A0A3S2TBD2   A0A2J7QSN3   A0A194RRT0   A0A2W1B9N8   A0A2A4IY54   A0A2J7PIK3   A0A2J7Q6H1   A0A2J7PD69   A0A2J7QZK8   A0A3S2TTE3   A0A3S2LRG0   A0A0K0E1W0   A0A2H1V5F3   A0A2J7Q8N9   A0A1Y1NAK0   G7PAN9   A0A1D5R1S0   K7DKZ9   H2NMQ4   G7MWA2   A0A2K5PIR4   A0A2K6S7R1   G3QWT8   Q96DM1   A0A2K5KZS5   A0A2K5BXT0   H9F6U8   A0A2K6JV20   A0A2K5UF88   A0A2K6NHE6   A0A2K5XAW3   A0A096NT85   A0A2K6ALX5   F7FDY8   A0A147BEZ3   L7M1S0   A0A2W1BNR3   A0A0D9SEG0   A0A2K5HN84   A0A1S3QP94   E2B4V1   A0A090X8N5   A0A2J7Q696   J9K770   A0A060WWG9   A0A147BD88   A0A3Q0JNJ9   A8J4K3   A0A087TLT3   A0A2Y9RRK0   A0A226D2G8   A0A1B6H7X0   A0A2J7RLZ2   J9JV15   A0A2J7RLZ6   A0A1A9WYG9   A0A1B6E873   A0A1B6HI21   A0A1A9WYH0   A0A226F854   A0A1A9ZX35   A0A087TRV5   A0A226EJ94  

KEGG

101745461    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0016021   GO:0003676   GO:0008270   GO:0007155   GO:0008305  

Length:

664

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0723999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00409

outside

1  -  664

 

 

Pi

25.894737

Theta

23.135863

Tajima's D

0.430925

CLR

0.583664

CSRT

0.493925303734813

Interpretation

Uncertain