Gene

KWMTBOMO11742  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004196

Annotation

presenilin-like_signal_peptide_peptidase_[Bombyx_mori]

Location

Bomo_Chr19(+):13127944-13130782      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.067

CDS

ATGCTGGGGCTGGGTGACATCGTGGTGCCCGGCATCTTCATAGCTCTCCTGTTGCGCTTCGATAAGAGCCTCAAACGGAACTCTGAGTTTTACTTCAGGGCTACGTTCAGCGCGTACATCCTGGGCCTGTTGGCGACCATCCTGGTGATGCACGTGTTCAAGCACGCGCAGCCCGCGCTGCTGTACCTCGTGCCCGCCTGCCTCGCCACCCCGCTCGCCCTGGCGCTCCTCCGCGGGGACCTGCCCGCGCTCTTCAAGTACGAGGACCAGCCGGCGGAGCCCGAAGCCGACAAGTCTAAGAAGTCCGAATAA

Protein

MLGLGDIVVPGIFIALLLRFDKSLKRNSEFYFRATFSAYILGLLATILVMHVFKHAQPALLYLVPACLATPLALALLRGDLPALFKYEDQPAEPEADKSKKSE

Uniprot

H9J3V7   Q2F650   A0A1E1WAZ9   A0A1E1WUA0   S4P7J2   A0A2H1VV03   + More
A0A212F3W0   A0A2A4K531   A0A3S2PEL6   A0A194PNH0   A0A0P5JSI7   A0A2R7X3P6   A0A0A9W108   A0A0N8DXA7   A0A0P5GGB9   A0A0P6CIL0   R4WK45   E9GIM7   A0A0P5WE88   A0A0A9VWW3   A0A067R1B5   A0A1Q3FDA1   A0A1B6M8U8   A0A1Q3F9F3   B0W1B1   A0A1B6LDS5   A0A1B6DVH2   A0A1B6CZZ9   A0A2J7QIM0   A0A1W4WMZ1   A0A1B6JLN1   A0A1J1I0W6   T1GAY5   A0A1B6IYH1   A0A1B6GIX3   A0A0A9W5J7   A0A023ERL0   A0A1B6L4N4   Q16NF3   Q16NF2   A0A1Q3FA65   A0A1Q3F2N9   A0A1Q3FCH6   A0A1Q3F919   A0A224XQX4   A0A0V0G5U1   T1JK34   A0A023F911   A0A182VU50   A0A182XDH8   A0A182VN91   A0A1S4GZD8   A0A182KNG6   A0A182TPQ0   A0A182I724   A0A1W7RAG8   A0A182M952   A0A1L8EHQ5   A0A151XHH9   A0A182PMF3   A0A182JZN1   A0A084VYF8   E2AW41   D6WPM6   C1BN69   A0A1B0CPU3   A0A0K8TQ08   A0A182R4A8   W5JQW3   A0A2M4A077   A0A182F1Y4   A0A2M3ZFI9   E9IB36   A0A182NUN5   A0A069DSE4   A0A182QID3   A0A182Y979   T1EA95   A0A2P2I150   A0A195ESI2   A0A226F5U5   J3JVJ6   F4X4Y3   A0A158NVX7   A0A151HYR6   A0A1W0WWW6   A0A182IJ78   E2BY52   A0A1Y1KED8   A0A2C9JQB2   A0A1D1W0B6   A0A1L8DUR1   A0A2A3EL48   A0A087ZWE0   V5I8T6   A0A182SGB8   A0A0L8FVH2   A0A1L8DUV8   A0A232EMF9   A0A0K2UXM0  

Pubmed

19121390    23622113    22118469    26354079    25401762    23691247    + More
21292972    24845553    26823975    24945155    17510324    25474469    12364791    20966253    24438588    20798317    18362917    19820115    26369729    20920257    23761445    21282665    26334808    25244985    22516182    23537049    21719571    21347285    28004739    15562597    27649274    28648823   

EMBL

BABH01028863    BABH01028864    DQ311222    ABD36167.1    GDQN01006901    JAT84153.1    + More
GDQN01000464    JAT90590.1    GAIX01006356    JAA86204.1    ODYU01004598    SOQ44650.1    AGBW02010485    OWR48420.1    NWSH01000119    PCG79351.1    RSAL01000070    RVE49191.1    KQ459598    KPI94533.1    GDIQ01194624    JAK57101.1    KK856752    PTY26366.1    GBHO01043491    GBHO01043486    JAG00113.1    JAG00118.1    GDIQ01191914    GDIQ01149594    GDIQ01102460    GDIP01129900    GDIQ01082812    LRGB01000568    JAL73814.1    JAN11925.1    KZS18094.1    GDIQ01245015    JAK06710.1    GDIP01007971    JAM95744.1    AK417980    BAN21195.1    GL732546    EFX80723.1    GDIP01100553    JAM03162.1    GBHO01043487    GBHO01043485    JAG00117.1    JAG00119.1    KK852779    KDR16682.1    GFDL01009546    JAV25499.1    GEBQ01016995    GEBQ01013825    GEBQ01007615    JAT22982.1    JAT26152.1    JAT32362.1    GFDL01010831    JAV24214.1    DS231821    EDS44981.1    GEBQ01018129    JAT21848.1    GEDC01007669    JAS29629.1    GEDC01018261    JAS19037.1    NEVH01013589    PNF28419.1    GECU01007535    JAT00172.1    CVRI01000038    CRK93991.1    CAQQ02136629    GECU01015754    JAS91952.1    GECZ01007390    JAS62379.1    GBHO01043489    GBHO01043488    GBRD01007862    GBRD01007861    GDHC01010534    JAG00115.1    JAG00116.1    JAG57959.1    JAQ08095.1    GAPW01001780    JAC11818.1    GEBQ01021330    JAT18647.1    CH477825    EAT35877.1    EAT35878.1    GFDL01010571    JAV24474.1    GFDL01013219    JAV21826.1    GFDL01009761    JAV25284.1    GFDL01010974    JAV24071.1    GFTR01005464    JAW10962.1    GECL01002689    JAP03435.1    JH431380    GBBI01001258    JAC17454.1    AAAB01008984    APCN01003350    GFAH01000262    JAV48127.1    AXCM01000044    GFDG01000676    JAV18123.1    KQ982129    KYQ59859.1    ATLV01018364    KE525231    KFB43002.1    GL443213    EFN62463.1    KQ971354    EFA06837.1    BT076048    ACO10472.1    AJWK01022647    GDAI01001377    JAI16226.1    ADMH02000599    ETN65693.1    GGFK01000886    MBW34207.1    GGFM01006576    MBW27327.1    GL762106    EFZ22217.1    GBGD01001901    JAC86988.1    AXCN02000734    GAMD01000632    JAB00959.1    IACF01001942    LAB67616.1    KQ981993    KYN31131.1    LNIX01000001    OXA65165.1    APGK01054913    BT127264    KB741253    KB632340    AEE62226.1    ENN71816.1    ERL92958.1    GL888679    EGI58556.1    ADTU01027585    KQ976730    KYM76393.1    MTYJ01000036    OQV19685.1    GL451420    EFN79331.1    GEZM01087040    JAV58898.1    BDGG01000014    GAV06841.1    GFDF01003907    JAV10177.1    KZ288215    PBC32533.1    GALX01004120    JAB64346.1    KQ426101    KOF68648.1    GFDF01003878    JAV10206.1    NNAY01003382    OXU19508.1    HACA01025090    CDW42451.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000283053    UP000053268    UP000076858    + More
UP000000305    UP000027135    UP000002320    UP000235965    UP000192223    UP000183832    UP000015102    UP000008820    UP000075920    UP000076407    UP000075903    UP000075882    UP000075902    UP000075840    UP000075883    UP000075809    UP000075885    UP000075881    UP000030765    UP000000311    UP000007266    UP000092461    UP000075900    UP000000673    UP000069272    UP000075884    UP000075886    UP000076408    UP000078541    UP000198287    UP000019118    UP000030742    UP000007755    UP000005205    UP000078540    UP000075880    UP000008237    UP000076420    UP000186922    UP000242457    UP000005203    UP000075901    UP000053454    UP000215335   

PRIDE

H9J3V7    Q2F650   

Pfam

PF04258   Peptidase_A22B

Interpro

IPR006639   Preselin/SPP        + More
IPR007369   Peptidase_A22B_SPP       

ProteinModelPortal

H9J3V7   Q2F650   A0A1E1WAZ9   A0A1E1WUA0   S4P7J2   A0A2H1VV03   + More
A0A212F3W0   A0A2A4K531   A0A3S2PEL6   A0A194PNH0   A0A0P5JSI7   A0A2R7X3P6   A0A0A9W108   A0A0N8DXA7   A0A0P5GGB9   A0A0P6CIL0   R4WK45   E9GIM7   A0A0P5WE88   A0A0A9VWW3   A0A067R1B5   A0A1Q3FDA1   A0A1B6M8U8   A0A1Q3F9F3   B0W1B1   A0A1B6LDS5   A0A1B6DVH2   A0A1B6CZZ9   A0A2J7QIM0   A0A1W4WMZ1   A0A1B6JLN1   A0A1J1I0W6   T1GAY5   A0A1B6IYH1   A0A1B6GIX3   A0A0A9W5J7   A0A023ERL0   A0A1B6L4N4   Q16NF3   Q16NF2   A0A1Q3FA65   A0A1Q3F2N9   A0A1Q3FCH6   A0A1Q3F919   A0A224XQX4   A0A0V0G5U1   T1JK34   A0A023F911   A0A182VU50   A0A182XDH8   A0A182VN91   A0A1S4GZD8   A0A182KNG6   A0A182TPQ0   A0A182I724   A0A1W7RAG8   A0A182M952   A0A1L8EHQ5   A0A151XHH9   A0A182PMF3   A0A182JZN1   A0A084VYF8   E2AW41   D6WPM6   C1BN69   A0A1B0CPU3   A0A0K8TQ08   A0A182R4A8   W5JQW3   A0A2M4A077   A0A182F1Y4   A0A2M3ZFI9   E9IB36   A0A182NUN5   A0A069DSE4   A0A182QID3   A0A182Y979   T1EA95   A0A2P2I150   A0A195ESI2   A0A226F5U5   J3JVJ6   F4X4Y3   A0A158NVX7   A0A151HYR6   A0A1W0WWW6   A0A182IJ78   E2BY52   A0A1Y1KED8   A0A2C9JQB2   A0A1D1W0B6   A0A1L8DUR1   A0A2A3EL48   A0A087ZWE0   V5I8T6   A0A182SGB8   A0A0L8FVH2   A0A1L8DUV8   A0A232EMF9   A0A0K2UXM0  

KEGG

693088    K09595 minor histocompatibility antigen H13 [EC:3.4.23.-] | (RefSeq) presenilin-like signal peptide

GO

GO:0016021   GO:0004190   GO:0033619   GO:0006465   GO:0071556   GO:0042500   GO:0071458   GO:0004553   GO:0005615   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR12174  

Length:

103

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

52.23842

Exp number, first 60 AAs:

34.77377

Total prob of N-in:

0.47916

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  20

outside

21  -  29

TMhelix

30  -  52

inside

53  -  58

TMhelix

59  -  77

outside

78  -  103

 

 

Pi

22.035757

Theta

18.493992

Tajima's D

0.34137

CLR

0.47318

CSRT

0.478326083695815

Interpretation

Uncertain