Gene

KWMTBOMO11740

Pre Gene Modal

BGIBMGA004160

Annotation

PREDICTED:_WD_repeat-containing_protein_CG11141_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(-):13104975-13122833      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.621

CDS

ATGGAAGTTCCTGGCGGCGCTGAGGACGGTTTTGTCCGGGAATGGGCACCGTGTTCGCATATTTTAAACTTAATACCTCCTAGGATACAAACTGGTATATTTTCTAGTGAGCTGTGCTTAACTTGTGTTGATTCTGTTAGTGAATATATTGCTTTGGGGACTAACGTCGGTCTGGTTTACTGGTACGACAGGAAGAAGGGAAATATTCAAAGACTACGCTGCGAGATATCAAACTCTCCAATAACTTATGTGAAAATAGTGAACACCGTTGATTATATGGTCGGTGCTGGTAATGCACACGGTCAAGTTACCGTCTTCCAGATACCCAAGGAGCACCCAGAAAACGTTCCCGACACATTCAAACCTAAAGTTGAACCCAAAGTGGAAAGGTATACTATAGGCGATCTACATAAAAGCGAAATAACTTCGATAGAATGGTCGAAGAACGGGATGCGATTGTTCTCGGGTGACAAAAACGGTGTTATTATAATGACGGAAATCGATTTTTATATGCACCTCTGCAAGTCGATGGAGATAGTTAACGAAGGTCACGAGATAGTCCAGATGAGCTATTACCAAAACACGTTGCTGGTGTCGAGCGTGTACCGCGGGATAGTATGCGAGAGGAGCGCCGACGGTAGGACGTGGCACGTCACGCAGCTCGGGAAGAAGGAGAGGAAAAGCCTGTGCGCGCTGGGGGCCGTGTTCCAGTACTCGTACCGCACGGGCGCCGCCGCCGCCTACTGCGCGAGGCCCGGCCTGCGCCTCTGGAGGGCGGACAGGAACGGCAACGTCCTCCACACGCTGCTGTTCAAGGAAGCCATATCGAACCCGCTAACGATAGCCGAACTACTGAATCCCTCGCAGAAGAAGCACTCGCACAGCGACCAGGACTACAACCTGGGACCGCTGTTCGTATTCCGCGAGCACTTCCTCGTTTCGCACAACGAGCACATCCTGTACATCCTGGACCCGAGGTCGTTGACCGCTGTCGCTGTTGTCGACGATCTGAGAAAGATTCTGTCAGTTTCCGTGAATAAAGACGAGATCTTCGTTCTCGAGGGTCCAAGGTCGCTGGTCAGACTGGCCCACGCTCCGGAACCCGCCGCTCTGGCCACAGACGAATCAACGAACGGCATGACAAAGTCTCTGACAACTTCAATACAGCAGGCCGTGAACACGGTCCGGGACCTGACGCACATCGACCAAACGGTCCCCTACATCACGAGCGTTCTCGAACAGCCAATATCGATTTTCACGAAGAACGAAGTGCTGGACAACAGCCCGATAGCGAGCGCCGAAGAGTGCTTCGAACTGCCTCCGATCAGAATCTTACCGAACGACATATCCGAGAACGTCTTAGAATCGATTGTCGGCGAGTATCGAGACGTGAACGATGCATACGAATCGAGGGGCACGAAAACGGATGAGCTGCAGAAGAAATTGGATTTGTTTAGTAGCATAATCGTTAAGAAGTGCGACGAGCAGCTGATACATAGCAGGAGGAGCAGGCGGAGGGAGGCGGGGTCGGGGGGCAGCACGCCGAGGTTGTCGACCCCGCCGAGGAAGCCGCCCGATGACGTCAGCTACACCAATCCGTGCATCATGAACGTTAGCATTTACGGGCATTACCAAGAAGAGAACGACGAAGCGCTCGCGAAACAGATCGAGGAGAAAGAGAAGATATTAGCGAAAATGCTTAACTTGGAATCGTTGAGCATAAAGGCGAAACCTCTGCCGCAGCGCGCCGACTCTCCGCCGCCGCCGCCCTTCACACGTGTGGAAATAAAACCGGACACGGACCGAGAGCGACCGGCGAACAGGAAACCGGAACCGCAGAAATCGGTAATAATCTCGAATAATACGGATTTGGTGCCTAAAATCGTCGAATTGCCAAACACGTGGAATTTAGAGAATATCGAGTTGAAATTAGATTTGAACAGCAGTAACAGCTTCGGCGATGGACTACGCTCGCCCGACGACCACCTCGACAGCGAGTGGGAGATCATATGA

Protein

MEVPGGAEDGFVREWAPCSHILNLIPPRIQTGIFSSELCLTCVDSVSEYIALGTNVGLVYWYDRKKGNIQRLRCEISNSPITYVKIVNTVDYMVGAGNAHGQVTVFQIPKEHPENVPDTFKPKVEPKVERYTIGDLHKSEITSIEWSKNGMRLFSGDKNGVIIMTEIDFYMHLCKSMEIVNEGHEIVQMSYYQNTLLVSSVYRGIVCERSADGRTWHVTQLGKKERKSLCALGAVFQYSYRTGAAAAYCARPGLRLWRADRNGNVLHTLLFKEAISNPLTIAELLNPSQKKHSHSDQDYNLGPLFVFREHFLVSHNEHILYILDPRSLTAVAVVDDLRKILSVSVNKDEIFVLEGPRSLVRLAHAPEPAALATDESTNGMTKSLTTSIQQAVNTVRDLTHIDQTVPYITSVLEQPISIFTKNEVLDNSPIASAEECFELPPIRILPNDISENVLESIVGEYRDVNDAYESRGTKTDELQKKLDLFSSIIVKKCDEQLIHSRRSRRREAGSGGSTPRLSTPPRKPPDDVSYTNPCIMNVSIYGHYQEENDEALAKQIEEKEKILAKMLNLESLSIKAKPLPQRADSPPPPPFTRVEIKPDTDRERPANRKPEPQKSVIISNNTDLVPKIVELPNTWNLENIELKLDLNSSNSFGDGLRSPDDHLDSEWEII

Uniprot

A0A2H1VUY0   A0A3S2LLC1   A0A194PP67   A0A212F3V8   A0A2A4K6F6   A0A1Y1MJB7   + More
A0A2A3ERC9   A0A0J7NIU9   V9IMF8   A0A195C8F4   E9IFT2   A0A158NBL5   E1ZY56   A0A195FDL3   A0A195BGC1   A0A195DR52   F4X8J3   A0A151WF68   A0A026W419   B4MR63   A0A1I8N152   A0A1B0AGG1   A0A1A9WR45   A0A1B0G1H9   A0A1A9V3A5   A0A182YDC4   A0A182JKM7   A0A1A9XFF1   A0A1B0BAN6   A0A182MXY1   A0A182R0K7  

Pubmed

26354079    22118469    28004739    21282665    21347285    20798317    + More
21719571    24508170    17994087    25315136    25244985   

EMBL

ODYU01004598    SOQ44651.1    RSAL01000070    RVE49190.1    KQ459598    KPI94534.1    + More
AGBW02010485    OWR48419.1    NWSH01000119    PCG79353.1    GEZM01029915    GEZM01029913    JAV85882.1    KZ288192    PBC34325.1    LBMM01004412    KMQ92440.1    JR053754    AEY62012.1    KQ978219    KYM96408.1    GL762897    EFZ20570.1    ADTU01011211    GL435171    EFN73905.1    KQ981673    KYN38292.1    KQ976500    KYM83259.1    KQ980581    KYN15348.1    GL888932    EGI57262.1    KQ983227    KYQ46468.1    KK107459    EZA50351.1    CH963849    EDW74602.1    CCAG010005392    JXJN01011084    AXCN02002113   

Proteomes

UP000283053    UP000053268    UP000007151    UP000218220    UP000242457    UP000036403    + More
UP000078542    UP000005205    UP000000311    UP000078541    UP000078540    UP000078492    UP000007755    UP000075809    UP000053097    UP000007798    UP000095301    UP000092445    UP000091820    UP000092444    UP000078200    UP000076408    UP000075880    UP000092443    UP000092460    UP000075884    UP000075886   

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR029772   TECPR2       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2H1VUY0   A0A3S2LLC1   A0A194PP67   A0A212F3V8   A0A2A4K6F6   A0A1Y1MJB7   + More
A0A2A3ERC9   A0A0J7NIU9   V9IMF8   A0A195C8F4   E9IFT2   A0A158NBL5   E1ZY56   A0A195FDL3   A0A195BGC1   A0A195DR52   F4X8J3   A0A151WF68   A0A026W419   B4MR63   A0A1I8N152   A0A1B0AGG1   A0A1A9WR45   A0A1B0G1H9   A0A1A9V3A5   A0A182YDC4   A0A182JKM7   A0A1A9XFF1   A0A1B0BAN6   A0A182MXY1   A0A182R0K7  

KEGG

101737097    no KO assigned | (RefSeq) WD repeat-containing protein CG11141

GO

GO:0005515   GO:0005975   GO:0004553   GO:0005615   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR23287:SF16  

Length:

670

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02

Exp number, first 60 AAs:

0.01123

Total prob of N-in:

0.00048

outside

1  -  670

 

 

Pi

26.869825

Theta

23.97988

Tajima's D

0.220508

CLR

0.502693

CSRT

0.438278086095695

Interpretation

Uncertain