SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11739
Pre Gene Modal
BGIBMGA004195
Annotation
PREDICTED:_uncharacterized_protein_LOC106113972_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.502
 

Sequence

CDS
ATGTCCGGTTATTTGGACGTTAAGTATCCTTTTAGATCAAATCTGGGCTTGAATCCTTTTAAGTCTTGGAAGAGGCAGTGGTGTATCCTGAGGCCTAGTGCAACTAGTTCGGGGGGCTCGTTGGCGGTGTACTGTAACGAGGCTGGAGCGGCCGTGGGCTGTGTGGAATTACCATCTGGCTGCGTGGTCCGAAGGGCGAAGTCCCGCTCACGCCCTCACGCTTTCGCTGTGTTCTCTGCCAGGGAACCTAATAAACCTATCGTTTTACTTGCCGCCTCCAATATTGAAGATGCTCAAACATGGATGGATAAGATTAAAAATTTATTAAACGATACGAGATTATTAACATCAAACACACCACTAAAAGATTCATACTCAGTAACGGTGGTCGCAACTGACTTATCACGGAAATGCGGTCTCCAAGATTCTGACAGCACGGTCACATTGTCAGCTCATGGTATGCTGATAACGAGGACCAATAGTATTGGTACATTTGTTGAATGGAAACACATGCAAGAAGTCCTGTTGTGCAGTGAAAATGGACAGAAGAGCGAATGTCTGGTATCTGTGAATAGTAAGTCTCCCCACGGCGGCGGCGATTTGAAGTTCGCGTCACCCCTAGCGTGCGAGCTGGTGTCCGCGTTACGCGCAGCCCTACACCGCAAGGCGCGGCTCGGCGCCAAGCTCAGCAAGAGCGAGGGCGATCTGAGGACGGCCAAGTGCAGCGACAGCGACCTGGGGGAGATCCGTCGCAGCAGCTGGTACAGCGGTCCCTCGGAGGTCTCCTTAGATGACATGGATCTGATCATGTCTAAGGACTACAAGTGTATCCCGTCCGGTCAGCTGTCCCGCTGCAGCGCCGCCGGACACCTGGCGCAGCACGCGCCCCTGGATCACAGCGCGTGCGACCGGCGCTCCGTCGCGTCGGTGTCGTCCGGCGTGTACGAAGAAATACCGGAGCCGCCTGCGCTCTACTGCGCCATGGGCAGGGGACCGCGGGCCGCACCGCTCCTCGACATGAAGAAGCTGAGCGTGGATGAGCCCACGTACGAGAGTATAGCCGAGTGCGGGTACGCGACCCTGCGCCGCGCCCGCGGTCATCCGCCCCCCCTGCCCCCCAGGTGCTTGAAGACCGGCGAGCCTTGGAGCGCGCGCCCCCAGCTGGTGTCCCGGCACTCCTCGCTGAGCGCGCTGCCGGGCGCCCCGCCGCACACCCTCACGCACACCCTCACCCTGCCGCGCCGAGACAAGCACAAGCAGCCCTTCAGCGTCTTCAGAAAACGACTAAAAAGCGACTCGCGCGTCGCGGGCTCGCCCAAATCCGAAACTCCCAAAGACAACAAGGACATTCAGCCCAAAAAGAAACGATTCGACTTCGCCCCCACCCGGGACATACTCAAGAGCTTCAAGGTGAGCCGCAAGGTCAAGAGCCAGAAGGCGGCGCCCGGCCTCGGCCACGTCGAGACTAAAAGCTGCGAGTTCTTGGACGAGACCGAGCACGTGGCCACCAGCCGCTGCTCCAAGTCCGTCGAGTGTCTGGAGGGCAACGACGAATACCTGGACGACTTCGAGGCGGACCTCTCGATACAGTTCAACGAGAAAGCAATAGAGGCGCTGTCGCTGCCGCAGGAGATCGTGGACTTGCTGCTCAGCATCAAGGAGTGCGAGGTGAGACTGAGGGACGACGAGAGTGAGTACGTCCCCATGACCCCCGCGGCGCCGGCCCCCGCCATGGAACATCACTACATAGTGATGTCGCCGAAGTCCAACCTCGCTTGA
Protein
MSGYLDVKYPFRSNLGLNPFKSWKRQWCILRPSATSSGGSLAVYCNEAGAAVGCVELPSGCVVRRAKSRSRPHAFAVFSAREPNKPIVLLAASNIEDAQTWMDKIKNLLNDTRLLTSNTPLKDSYSVTVVATDLSRKCGLQDSDSTVTLSAHGMLITRTNSIGTFVEWKHMQEVLLCSENGQKSECLVSVNSKSPHGGGDLKFASPLACELVSALRAALHRKARLGAKLSKSEGDLRTAKCSDSDLGEIRRSSWYSGPSEVSLDDMDLIMSKDYKCIPSGQLSRCSAAGHLAQHAPLDHSACDRRSVASVSSGVYEEIPEPPALYCAMGRGPRAAPLLDMKKLSVDEPTYESIAECGYATLRRARGHPPPLPPRCLKTGEPWSARPQLVSRHSSLSALPGAPPHTLTHTLTLPRRDKHKQPFSVFRKRLKSDSRVAGSPKSETPKDNKDIQPKKKRFDFAPTRDILKSFKVSRKVKSQKAAPGLGHVETKSCEFLDETEHVATSRCSKSVECLEGNDEYLDDFEADLSIQFNEKAIEALSLPQEIVDLLLSIKECEVRLRDDESEYVPMTPAAPAPAMEHHYIVMSPKSNLA

Summary

Pfam
PF00169   PH
Interpro
IPR011993   PH-like_dom_sf        + More
IPR001849   PH_domain       
Gene 3D
PDB
5MR1     E-value=0.00348539,     Score=97

Ontologies

GO

Topology

Length:
592
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00323
Exp number, first 60 AAs:
0.00262
Total prob of N-in:
0.00058
outside
1  -  592
 
 

Population Genetic Test Statistics

Pi
2.120388
Theta
15.239371
Tajima's D
-1.047864
CLR
13.675866
CSRT
0.127993600319984
Interpretation
Uncertain
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