Gene

KWMTBOMO11735  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004193

Annotation

PREDICTED:_CD109_antigen_[Papilio_xuthus]

Location

Bomo_Chr19(+):12993584-13026589      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.407

CDS

ATGAATCTCAAATTATTACTCATAATTACCATATTAAAAACATGTACAAGTCAAGACTATGCACAGCCAACCTATAATCCAGATATCACTCAAAACACAAATAATTACAATGATCCAAGATATGATAATCCATATGACCCAAACCGTAAATACCAAAATAAGAATCAATATGAATTGAACAGGAATCAATATGAATTAAATAGGAATCAATATGATAACACAGATCAGAGATTCCAGTATGATAATAGAAATGAACCGTTCAATCAGAATTCCTACAGTCCAGATGTGACACCAAAGAGCTCATGGGATTCTAACAGGAATTATGGTAGTTCTTATAGAAATGCTGCTTTGGAGCAAGAGAGTGTAATAATTCATCAAGCCACATACTTCATAGTAGCATCCCGTATGGTAAGACCTGGCCAAATATACAAGATATCCGCAAACATTCTGCAAACTCAGCTAGAAATGACAATCAGAGCTTCAATTGCATGCAATGGAGTTGAAGTAGCTGAAGTCACACAAAAAGTCAAAGAGGGTGTGCCTGAAATACTAAATATGAGGGTACCGCCAACAACAGTTAAAGGAGACTACCGGCTTCGTGTTGAGGGCTTGTACTTAGACACACCATATGGAGGCAGGGCGTTCATTAATGAAACACAACTGACATTCTCTAATAGGTTCATGACCATATTCATACAGATGGACAAGCCAGTATATATGCAGGGGCAAACAGTACGCTTCCGAGTGATTCCGATCAATACAGAGCTAAAAGCGTTTGGACATGCCATAGACGTGTACATTTTGGATCCGAATCGCCGCATCATGAAGAGGTGGCTTTCCAGACAGAGCAACTTCGGAACAGTTAGCCTTCAGTATCAGTTGTCTGACCAACCCTTGTTCGGAGAGTGGTACGTCAAGGTTGAAGCCCTGGGACAGGTAGAAGAGTCACAGTTTTTGGTTGAAGAGTACTACCAGACAAGATATGAGGTGAACGTGACGATGCCGGCGTTCTTTTTCAACACGGAGCAGTACATCCACGGCCGCGTCGTGGCTAACTACACGTCGGGGGCGCCCGTGCGCGGCAACCTCACGCTCAAGGCGACCGTGCGCCCCATCCCGCAGTACCGGCCCCCGCACTACGGCCGCGGACAGTTCAACAACCGGGGGCACTACGGAGACGCGGGGGCCGCCGGCTCTCAGTACACAAGAGCATGGCCGAATAGTCTGTACAACGAGACGTACGGGTCGGAGCTGGGGCCGGGCCCGGCGGAGGGCGGCGCGGACCGGCGCTACGTCGCGGGGCAGCACAACCAGCTGGACCAGCCCGACTGGTGGTACGACCACACCAAGGTCGTCACCAGGATGTTCAACTTTGATGAAAAATATCCTTTCTGGATGCCGAAGCCCGACCCTACGGAGTACGCCGTGCAGCAGCAGCAGGGCACCTACGCCTACAACCAGTACCCCGCGACCGGCTACTCCTACTACTCCGCGCAGTACAACGACCAACTACCCTATCTGAGATTTTTCAATGGCACATACGATTTCAAATACCCAATGTCGGAGCTGGCGCAGCTGGTCCCCAGCCTGGACGGGGTGGAAGTCATAGTGACGGCCGCCGTCGGAGATCCATTCCTGGACGATGTCATTGAAGGGTACAGTGTTGCCAGGATATTCAACTCTTCCTTGGCTGTCACTTTCTTAGGAGGGAGCCCTCAGGTCTTCAAGCCGGCCATGCCTTTTGATGTTTACATGGCGGTGTCGTACCACGACGGGTCGCGCGTGGAGGCGGCGCGGGCGGCGCGCCTGGCGCTGCGGGTCACGGCGCAGCTGGAGGGCCGCTCCGCCACGCTGGACGCGCTGCAGCCCGCGCCCGTGCCCGGACACGCGCACGTGTGGCACCTCAAGCTCGACCTCTACAACCTGCTGCACTTGCAATCGGATCCGAATTACCGCGAAGTGTTGAACAGCATAACCGGGATCCGGCTGACCGCCCAGCTGCTCGACGTGGGCGGCTACCACGCCTCCGCCGACGTGCACTTCATCGCGCACTACAGCCCCAACAACCAGCAGATTAAGATATCTACCACCACCACCAGTGCGAAGGTCGGCGAATACATAATCTTCCACGTGCAAAGCAACTTCTACATAGAGTCGTTCAACTATGTGGTGATGTCCAAGGGCATTATATTGACTAGCGCACAAGAGATAATGCAGGAAGGCGTCCGCACGTTCGCGGTGACGCTGTCGGCGGAGATGGCGCCCGTGGCCAGCGTCGTGGTGTGGAGCGCCGACCGCCGCGGACACGTCGTGGCAGACTCGCTCACCTTCCCCGTCAACGGAGTCTCCAGGAACAACTTCACAGTGTTCATCAACAACCGCAAGCACCGCACCGGGGAGAAAGTGGAAGTGGCTATATACGGCGAGCCCGGGGCCTACGTGGGACTGTCCGGGCTGGACCACGCCTTCTACACGATGCAGGCCGGGAACGAACTCACATACGCTAAGGTGATATCGAAGATGTCGTATTTCGATGAATCCACGAACGGCACGTTCGCGTACACGTGGCGCTCGCACTTCGGGGACGCGGACGAGCTGGTCTACTTCCCCTCCTCCAGCTTCGGGATCGACGCTAACAGGACCTTCGAGTGA

Protein

MNLKLLLIITILKTCTSQDYAQPTYNPDITQNTNNYNDPRYDNPYDPNRKYQNKNQYELNRNQYELNRNQYDNTDQRFQYDNRNEPFNQNSYSPDVTPKSSWDSNRNYGSSYRNAALEQESVIIHQATYFIVASRMVRPGQIYKISANILQTQLEMTIRASIACNGVEVAEVTQKVKEGVPEILNMRVPPTTVKGDYRLRVEGLYLDTPYGGRAFINETQLTFSNRFMTIFIQMDKPVYMQGQTVRFRVIPINTELKAFGHAIDVYILDPNRRIMKRWLSRQSNFGTVSLQYQLSDQPLFGEWYVKVEALGQVEESQFLVEEYYQTRYEVNVTMPAFFFNTEQYIHGRVVANYTSGAPVRGNLTLKATVRPIPQYRPPHYGRGQFNNRGHYGDAGAAGSQYTRAWPNSLYNETYGSELGPGPAEGGADRRYVAGQHNQLDQPDWWYDHTKVVTRMFNFDEKYPFWMPKPDPTEYAVQQQQGTYAYNQYPATGYSYYSAQYNDQLPYLRFFNGTYDFKYPMSELAQLVPSLDGVEVIVTAAVGDPFLDDVIEGYSVARIFNSSLAVTFLGGSPQVFKPAMPFDVYMAVSYHDGSRVEAARAARLALRVTAQLEGRSATLDALQPAPVPGHAHVWHLKLDLYNLLHLQSDPNYREVLNSITGIRLTAQLLDVGGYHASADVHFIAHYSPNNQQIKISTTTTSAKVGEYIIFHVQSNFYIESFNYVVMSKGIILTSAQEIMQEGVRTFAVTLSAEMAPVASVVVWSADRRGHVVADSLTFPVNGVSRNNFTVFINNRKHRTGEKVEVAIYGEPGAYVGLSGLDHAFYTMQAGNELTYAKVISKMSYFDESTNGTFAYTWRSHFGDADELVYFPSSSFGIDANRTFE

Uniprot

A0A2H1V385   A0A2W1BBP4   A0A194PP72   A0A212F3V4   W4VRF5   A0A1B0DDW4   + More
A0A1A9WXK7   A0A0K8WIV5   A0A0A1WXP7   A0A182VUE7   W8AU71   A0A194QZL7   A0A1A9V873   A0A1A9Z7W2   A0A182G988   A0A1B0FEH7   A0A182RIR5   Q9VLT3   B4H8S4   W5J7R0   B4HYE4   B4Q695   A0A182LWS0   A0A1S4FVT1   Q29L41   A0A3B0JIK6   B4NWD3   Q16ML5   B3N700   A0A182YDS5   A0A2M4A643   A0A1W4VWA1   A0A2M4B942   A0A182F3H8   A0A182K3J6   A0A1I8N7Q0   B4JC03   B4LSL8   A0A0L0BUR7   A0A182UU83   A0A182XFW0   B3MMX3   A0A2M3YYW7   A0A182IC44   A0A0M4E7I1   A0A182PLT4   Q7Q4I0   A0A182NU17   A0A182L0H1   A0A182QBP8   A0A1W4WJK7   B4KEC4   A0A1I8P6G5   A0A1Q3G1A3   B4MUI3   A0A1Q3G176   A0A1Q3G198   A0A182IRV6   A0A336LJG8   A0A336LMP6   A0A1B0C3H6   A0A1A9XEP9   A0A1Y1K3A7   A0A1J1IH12   A0A084WH46   A0A0C9RF11   D6WR12   A0A2A3EUP1   A0A088A9Z0   A0A2H4N0Q2   A0A0M8ZS67   A0A023F4J8   A0A0L7QQH7   A0A310SHT3   A0A2H8TLS3   J9KAR6   A0A0A9XXA7  

Pubmed

28756777    26354079    22118469    25830018    24495485    26483478    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    20920257    23761445    22936249    15632085    17550304    17510324    25244985    25315136    26108605    12364791    20966253    28004739    24438588    18362917    19820115    25474469    25401762   

EMBL

ODYU01000451    SOQ35259.1    KZ150162    PZC72692.1    KQ459598    KPI94539.1    + More
AGBW02010485    OWR48415.1    GANO01003251    JAB56620.1    AJVK01005471    AJVK01005472    AJVK01005473    AJVK01005474    GDHF01001226    JAI51088.1    GBXI01011099    GBXI01000847    JAD03193.1    JAD13445.1    GAMC01014150    GAMC01014149    JAB92405.1    KQ460949    KPJ10420.1    JXUM01153637    JXUM01153638    CCAG010005473    AE014134    AY058526    AAF52601.1    AAL13755.1    CH479225    EDW35133.1    ADMH02001920    ETN60497.1    CH480818    EDW52074.1    CM000361    CM002910    EDX04171.1    KMY88916.1    AXCM01003842    CH379061    EAL32983.1    OUUW01000006    SPP82035.1    CM000157    EDW88450.1    CH477858    EAT35575.1    CH954177    EDV59296.1    GGFK01002953    MBW36274.1    GGFJ01000207    MBW49348.1    CH916368    EDW04106.1    CH940649    EDW64840.1    JRES01001301    KNC23782.1    CH902620    EDV30998.1    GGFM01000680    MBW21431.1    APCN01000774    APCN01000775    CP012523    ALC38727.1    AAAB01008964    EAA12257.4    AXCN02000809    CH933807    EDW12892.1    GFDL01001454    JAV33591.1    CH963857    EDW76178.2    GFDL01001490    JAV33555.1    GFDL01001475    JAV33570.1    UFQT01000024    SSX18040.1    SSX18041.1    JXJN01024953    GEZM01099385    JAV53357.1    CVRI01000048    CRK99058.1    ATLV01023789    KE525346    KFB49540.1    GBYB01006970    JAG76737.1    KQ971351    EFA07485.1    KZ288186    PBC34859.1    KY653075    KY986533    ATU47269.1    ATU47287.1    KQ435878    KOX70060.1    GBBI01002540    JAC16172.1    KQ414786    KOC60872.1    KQ765605    OAD53855.1    GFXV01003096    MBW14901.1    ABLF02029698    GBHO01018162    JAG25442.1   

Proteomes

UP000053268    UP000007151    UP000092462    UP000091820    UP000075920    UP000053240    + More
UP000078200    UP000092445    UP000069940    UP000092444    UP000075900    UP000000803    UP000008744    UP000000673    UP000001292    UP000000304    UP000075883    UP000001819    UP000268350    UP000002282    UP000008820    UP000008711    UP000076408    UP000192221    UP000069272    UP000075881    UP000095301    UP000001070    UP000008792    UP000037069    UP000075903    UP000076407    UP000007801    UP000075840    UP000092553    UP000075885    UP000007062    UP000075884    UP000075882    UP000075886    UP000192223    UP000009192    UP000095300    UP000007798    UP000075880    UP000092460    UP000092443    UP000183832    UP000030765    UP000007266    UP000242457    UP000005203    UP000053105    UP000053825    UP000007819   

PRIDE

Q9VLT3    B4NWD3   

Pfam

PF07678   TED_complement        + More
PF17791   MG3
PF01835   MG2
PF00207   A2M
PF07703   A2M_BRD
PF00057   Ldl_recept_a
PF07677   A2M_recep

Interpro

IPR001599   Macroglobln_a2        + More
IPR011625   A2M_N_BRD       
IPR002890   MG2       
IPR013783   Ig-like_fold       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR011626   Alpha-macroglobulin_TED       
IPR041555   MG3       
IPR008930   Terpenoid_cyclase/PrenylTrfase       
IPR036595   A-macroglobulin_rcpt-bd_sf       
IPR009048   A-macroglobulin_rcpt-bd       

SUPFAM

SSF48239   SSF48239        + More
SSF57424   SSF57424       
SSF49410   SSF49410       

Gene 3D

2.60.40.10     4.10.400.10     2.60.40.690    

CDD

cd00112  LDLa

ProteinModelPortal

A0A2H1V385   A0A2W1BBP4   A0A194PP72   A0A212F3V4   W4VRF5   A0A1B0DDW4   + More
A0A1A9WXK7   A0A0K8WIV5   A0A0A1WXP7   A0A182VUE7   W8AU71   A0A194QZL7   A0A1A9V873   A0A1A9Z7W2   A0A182G988   A0A1B0FEH7   A0A182RIR5   Q9VLT3   B4H8S4   W5J7R0   B4HYE4   B4Q695   A0A182LWS0   A0A1S4FVT1   Q29L41   A0A3B0JIK6   B4NWD3   Q16ML5   B3N700   A0A182YDS5   A0A2M4A643   A0A1W4VWA1   A0A2M4B942   A0A182F3H8   A0A182K3J6   A0A1I8N7Q0   B4JC03   B4LSL8   A0A0L0BUR7   A0A182UU83   A0A182XFW0   B3MMX3   A0A2M3YYW7   A0A182IC44   A0A0M4E7I1   A0A182PLT4   Q7Q4I0   A0A182NU17   A0A182L0H1   A0A182QBP8   A0A1W4WJK7   B4KEC4   A0A1I8P6G5   A0A1Q3G1A3   B4MUI3   A0A1Q3G176   A0A1Q3G198   A0A182IRV6   A0A336LJG8   A0A336LMP6   A0A1B0C3H6   A0A1A9XEP9   A0A1Y1K3A7   A0A1J1IH12   A0A084WH46   A0A0C9RF11   D6WR12   A0A2A3EUP1   A0A088A9Z0   A0A2H4N0Q2   A0A0M8ZS67   A0A023F4J8   A0A0L7QQH7   A0A310SHT3   A0A2H8TLS3   J9KAR6   A0A0A9XXA7  

PDB

4D94     E-value=3.70251e-21,     Score=254

KEGG

101747073    no KO assigned | (RefSeq) CD109 antigen-like

GO

GO:0005615   GO:0004866   GO:0016021   GO:0035159   GO:0007391   GO:0050832   GO:0019991   GO:0005886   GO:0008258   GO:0016327   GO:0016328   GO:0005918   GO:0016324   GO:0005198   GO:0016323   GO:0006910   GO:0008270   GO:0003755   GO:0006457   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

SignalP

Position:   1 - 17,         Likelihood:  0.986613

 

 

Length:

883

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0642800000000001

Exp number, first 60 AAs:

0.00075

Total prob of N-in:

0.00010

outside

1  -  883

 

 

Pi

21.179366

Theta

16.289274

Tajima's D

-1.927479

CLR

2.006361

CSRT

0.0174491275436228

Interpretation

Uncertain