Gene

KWMTBOMO11734  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004191

Annotation

PREDICTED:_zinc_finger_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(+):12973684-12984301      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.643

CDS

ATGAGTTCAAGCGTTTGCTACAAGTGCAACCGGACCGGGCATTTCGCGCGCGAATGCACGCAGGGGGGCGTGGTGTCGCGGGATTCCGGTTTCAATCGGCAACGTGAGAAGTGCTTCAAGTGCAACCGCACAGGACACTTTGCGAGGGATTGCAAGGAAGAGGCTGACCGTTGCTACAGATGTAACGGCACTGGGCACATAGCGCGCGAGTGCGCACAGAGCCCGGACGAGCCGTCATGTTACAACTGCAACAAGACGGGCCACATCGCACGGAACTGTCCCGAGGGGGGGCGGGAGTCTGCGACGCAGACCTGCTATAACTGCAACAAGTCCGGCCACATCTCCCGCAACTGTCCCGACGGCACCAAGACGTGCTACGTGTGCGGCAAGCCCGGCCACATCTCGCGCGAGTGCGACGAGGCGCGGAACTAG

Protein

MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN

Uniprot

Q3L234   A0A3S2TL92   A0A2A4K6G8   A0A2A4K542   A0A0K8SLJ4   A0A2H1V338   + More
I4DIY6   A0A194R3K3   A0A194PTS6   I4DM61   A0A212F3W1   A0A1E1WT25   A0A0L7LQN1   A0A1B0CTD1   A0A1L8DSS2   B7U4P9   A0A1B6ECJ2   A0A1B6F381   A0A1W4WYI3   A0A1B6KW45   D1FPM1   A0A139WF77   A0A067RA31   R4UK13   A0A151IWZ0   A0A195EW39   E2BYY6   A0A158NNV4   E2A8B4   A0A151ICA4   R4WNK7   A0A182J707   A0A084VN92   A0A0T6ATF8   A0A2J7QCN2   A0A2J7QMS3   T1E829   A0A2M4CSS5   A0A2M3YXX9   A0A2M4A094   A0A2M4C237   Q7PNE6   A0A3L8DNL0   A0A0M8ZWY1   A0A067QNY2   A0A1D1XQS6   W5JKG9   T1E802   J9HTV7   T1PFN3   A0A2A3E706   A0A0L7RFS0   V9IKH5   A0A087ZVA0   K7IM87   A0A224XVP6   A0A0V0G2P5   A0A069DNX6   R4FNM1   A0A023F9L7   A0A1Q3F3Q2   T1DIY4   A0A1Q3F5A4   A0A1Q3F6W3   T1H7E5   A0A182UXT3   A0A1I8PVL0   T1IWB3   N6UC67   A0A182L1M3   A0A2R7WMY2   D3TRZ3   B0W4N4   A0A182F6C6   A0A0P4VYS6   A0A1L8EEM1   A0A1Q3EZP0   W8CDG6   A0A0P4WXY5   A0A0A9YBN6   A0A0P4WHY6   A0A182Y043   A0A0K8WLI5   A0A034WW73   A0A0C9RXL0   A0A0A1WN46   A0A0P4WQB0   C6ZQR4   A0A0P4VTP0   A0A0N8P0F2   A0A1S3CYV4   F4WVA6   A0A195BRX5   A0A0J7NPD9   A0A0K8TT64   A0A3B0J2J9   I7M5V3   A0A1S3D2Q5   A0A3R7SSU7  

Pubmed

19121390    22651552    26354079    22118469    26227816    20441151    + More
18362917    19820115    24845553    20798317    21347285    23691247    24438588    12364791    14747013    17210077    30249741    20920257    23761445    17510324    25315136    20075255    26334808    25474469    24330624    23537049    20966253    20353571    27129103    24495485    25401762    25244985    25348373    25830018    20496585    17994087    21719571    26369729    15632085   

EMBL

BABH01028843    AY753659    AAX09282.1    RSAL01000070    RVE49186.1    NWSH01000119    + More
PCG79363.1    PCG79361.1    GBRD01011617    JAG54207.1    ODYU01000451    SOQ35258.1    AK401254    BAM17876.1    KQ460949    KPJ10421.1    KQ459598    KPI94540.1    AK402379    BAM19001.1    AGBW02010485    OWR48414.1    GDQN01010323    GDQN01000861    GDQN01000552    JAT80731.1    JAT90193.1    JAT90502.1    JTDY01000300    KOB77808.1    AJWK01027434    GFDF01004562    JAV09522.1    FJ430683    ACJ50597.1    GEDC01001657    JAS35641.1    GECZ01026737    GECZ01025050    GECZ01001361    JAS43032.1    JAS44719.1    JAS68408.1    GEBQ01024285    JAT15692.1    EZ419771    ACY69944.1    KQ971352    KYB26648.1    KK852643    KDR19567.1    KC571915    AGM32414.1    KQ980843    KYN12293.1    KQ981953    KYN32453.1    GL451531    EFN79104.1    ADTU01021805    GL437526    EFN70327.1    KQ978062    KYM97714.1    AK417226    BAN20441.1    ATLV01014730    KE524984    KFB39436.1    LJIG01022865    KRT78326.1    NEVH01016289    PNF26333.1    NEVH01013204    PNF29882.1    GAMD01003108    JAA98482.1    GGFL01004053    MBW68231.1    GGFM01000363    MBW21114.1    GGFK01000913    MBW34234.1    GGFJ01010236    MBW59377.1    AAAB01008964    EAA12317.4    QOIP01000006    RLU21876.1    KQ435830    KOX71736.1    KK853183    KDR10130.1    GDJX01023206    JAT44730.1    ADMH02000936    ETN64631.1    GAMD01003178    JAA98412.1    CH478212    EJY58088.1    KA647469    AFP62098.1    KZ288348    PBC27495.1    KQ414598    KOC69832.1    JR048970    AEY60819.1    GFTR01002508    JAW13918.1    GECL01003721    JAP02403.1    GBGD01003349    JAC85540.1    ACPB03019911    GAHY01001234    JAA76276.1    GBBI01000516    GEMB01000692    JAC18196.1    JAS02443.1    GFDL01012853    JAV22192.1    GALA01000666    JAA94186.1    GFDL01012336    JAV22709.1    GFDL01011745    JAV23300.1    JH431612    APGK01029404    APGK01029405    KB740734    ENN79255.1    KK855120    PTY20976.1    EZ424195    ADD20471.1    DS231838    EDS33879.1    GDKW01001889    JAI54706.1    GFDG01001658    JAV17141.1    GFDL01014286    JAV20759.1    GAMC01001981    JAC04575.1    GDRN01050044    JAI66491.1    GBHO01025045    GBHO01014040    JAG18559.1    JAG29564.1    GDRN01050045    JAI66490.1    GDHF01017742    GDHF01000308    JAI34572.1    JAI52006.1    GAKP01000899    JAC58053.1    GBYB01013910    JAG83677.1    GBXI01014025    JAD00267.1    GDRN01050046    GDRN01050043    JAI66492.1    EZ114865    ACU30918.1    GDKW01001250    JAI55345.1    CH902619    KPU76956.1    GL888384    EGI61872.1    KQ976417    KYM89782.1    LBMM01002789    KMQ94360.1    GDAI01000508    JAI17095.1    OUUW01000001    SPP73293.1    CM000071    EAL26521.1    QCYY01002023    ROT73514.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000092461    UP000192223    UP000007266    UP000027135    UP000078492    UP000078541    UP000008237    UP000005205    UP000000311    UP000078542    UP000075880    UP000030765    UP000235965    UP000007062    UP000279307    UP000053105    UP000000673    UP000008820    UP000095301    UP000242457    UP000053825    UP000005203    UP000002358    UP000015103    UP000015102    UP000075903    UP000095300    UP000019118    UP000075882    UP000002320    UP000069272    UP000076408    UP000007801    UP000079169    UP000007755    UP000078540    UP000036403    UP000268350    UP000001819    UP000283509   

PRIDE

Q3L234   

Pfam

PF00098   zf-CCHC        + More
PF09730   BicD

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR000477   RT_dom       
IPR001879   GPCR_2_extracellular_dom       
IPR018477   BICD       

SUPFAM

SSF57756   SSF57756       

ProteinModelPortal

Q3L234   A0A3S2TL92   A0A2A4K6G8   A0A2A4K542   A0A0K8SLJ4   A0A2H1V338   + More
I4DIY6   A0A194R3K3   A0A194PTS6   I4DM61   A0A212F3W1   A0A1E1WT25   A0A0L7LQN1   A0A1B0CTD1   A0A1L8DSS2   B7U4P9   A0A1B6ECJ2   A0A1B6F381   A0A1W4WYI3   A0A1B6KW45   D1FPM1   A0A139WF77   A0A067RA31   R4UK13   A0A151IWZ0   A0A195EW39   E2BYY6   A0A158NNV4   E2A8B4   A0A151ICA4   R4WNK7   A0A182J707   A0A084VN92   A0A0T6ATF8   A0A2J7QCN2   A0A2J7QMS3   T1E829   A0A2M4CSS5   A0A2M3YXX9   A0A2M4A094   A0A2M4C237   Q7PNE6   A0A3L8DNL0   A0A0M8ZWY1   A0A067QNY2   A0A1D1XQS6   W5JKG9   T1E802   J9HTV7   T1PFN3   A0A2A3E706   A0A0L7RFS0   V9IKH5   A0A087ZVA0   K7IM87   A0A224XVP6   A0A0V0G2P5   A0A069DNX6   R4FNM1   A0A023F9L7   A0A1Q3F3Q2   T1DIY4   A0A1Q3F5A4   A0A1Q3F6W3   T1H7E5   A0A182UXT3   A0A1I8PVL0   T1IWB3   N6UC67   A0A182L1M3   A0A2R7WMY2   D3TRZ3   B0W4N4   A0A182F6C6   A0A0P4VYS6   A0A1L8EEM1   A0A1Q3EZP0   W8CDG6   A0A0P4WXY5   A0A0A9YBN6   A0A0P4WHY6   A0A182Y043   A0A0K8WLI5   A0A034WW73   A0A0C9RXL0   A0A0A1WN46   A0A0P4WQB0   C6ZQR4   A0A0P4VTP0   A0A0N8P0F2   A0A1S3CYV4   F4WVA6   A0A195BRX5   A0A0J7NPD9   A0A0K8TT64   A0A3B0J2J9   I7M5V3   A0A1S3D2Q5   A0A3R7SSU7  

PDB

5O2U     E-value=9.09209e-06,     Score=111

KEGG

692655    K09250 cellular nucleic acid-binding protein | (RefSeq) zinc finger protein

GO

GO:0008270   GO:0003676   GO:0016020   GO:0004930   GO:0016874   GO:0005737   GO:0003727   GO:2000767   GO:0003729   GO:0045182   GO:0008168   GO:0003755   GO:0006457   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR31233  

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.42025

outside

1  -  143

 

 

Pi

27.694719

Theta

24.408841

Tajima's D

0.447577

CLR

1.986752

CSRT

0.498025098745063

Interpretation

Uncertain