Gene

KWMTBOMO11733

Pre Gene Modal

BGIBMGA004163

Annotation

PREDICTED:_peptidylprolyl_isomerase_domain_and_WD_repeat-containing_protein_1-like_[Amyelois_transitella]

Location

Bomo_Chr19(-):12956991-12971023      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.205

CDS

ATGTCCGCCGAGAAAAGAACAGCCGATGACGAAAAAGCTGCTGGAGAATGTGACGGTGATGATCCAGAAAACTGGATTGGACCAATGCCTTCAGAGGCGGTAAAACCCAAACAAAAAAAACGAAAAGTATTAGAATTTGAAACACTATACCTGGAGAATTTGCCTTCATCAGAAACATATGAAAGAAGTTTCATGCACAGGGATATTGTTACACACGTACTTGTCACAAAAACTGATTTTGTGGTAACAGCAAGTCAGGATGGTCATTTGAAATTTTGGAAGAAACAAGAAGAAGGTATAGAATTCGTAAAGCACTTCAGATGTCACTTAGCACCAATCTCCCATGTCGCAGCAAACAGCACCGGTACTTTACTCTGCACTGCATCACCAGAGAAGACAATAAAGGTGTTTGATGTTGTTAACTTTGATATGATTAACATGATATCAATAGATTTTGAGCCATATCGAGTGGAGTGGGTGCATTCCGCTGGTGACCCCATCTCAGCTTTAGCTGTCTCGGACAGAAACACAAATAAGATTCACGTGTACGACGGCACGCAAGCTTCGGGCACTCCGCTGCACACGTTCGAGACTCTGCACCAGACCGCGGTGGCGGTCATCAAGTATAACCCGGTCTTCGAAACTGCTGTCTCCGTCGATAAGGCCGGCATAGTCGAGTACTGGACGGGTCCGAAGCACGAATACAATTTCCCCAAGACGGTGAGGTTTCAGTCGAAGCTCGACACGGACCTGTACGACTTCGTGAAGAACAAGACTTGTCCGACGGCGCTGGACTTCTCGCCGGACGGCAGAAAGATGGCCTCGATAAGCCTCGACAGGAAGGTGCGAGTGTTCCACTTCCTGACCGGCAAACTGCACAAGGTGATCGACGAGAGCCTGCAGCGGTTCCAGGAGTTGCAGCATCAGACGCAGCAGCTGCCCAACATGGAGTTCGGGAGGAGGATGGCGACGGAGCGCGACCTGGAGAAGTCTGAGTGCGTGTCGCTGGGCAACGTGGCGTTCGACTGCAGCGGACACTTCGTGCTGTACGGCACGCTGCTGGGCGCCAAGCTCGTCAACCTGGCCACCAACCGCTGCGCCGCCACCTTCGCCAGGACGGAGAACCTCAGGCCGCTGCACCTCGCACTCTTCCAGGGCCGCCTCAACCAGCCCAAGGTGGCGTCGACCCTCGAAATGGAGGGCTCCGAGAACCCCGCGCTGCTGACCGTGAAGACGGACCCCACGCTGTTCTGCACGGCCTACAAGAAGAACAGGTTCTATCTGTTCTCCAAGCGCAGCCCCGACGACGTCAAGGGCCCGGACAACGACAGAGACATCTTCAACGAGAAGCCGTCCAAGGAGGATATCATCTCCGCCACCGAGGGCCAAGGAGTCCAGCGGATCTACGAGCAGGCGGTCATACACACGACGCTGGGCGACATCCACGTGCGGATCTTCGGGAAGGACGTCCCGAAGACGGCCGAGAACTTCTGCGTCCACGCCAGGAACGGCTACTACAACGGACACATCTTCCACCGGGTCATCAAGGGCTTCATGGTGCAGACCGGGGACCCCACAGGCACCGGCACGGGCGGGGAGAGCATCTGGGGCGGCGAGTTCGCGGACGAGTTCCGCGCGCACCTCAAGCACGACCGGCCCTACACGCTCAGCATGGCCAACGCCGGGCCCGACACCAACGGCAGCCAGTTCTTCATCACGCTGGCGCCCACGCCGTGGCTGGACAACAAGCACACGGTGTTCGGTCGCGTGACGCGCGGCATGGAGGTCGTGCAGAACATCGGCGCCGCCAAGACCAACCCCAAGACCGACAAGCCCTACGACGACATCAGGATCCTGTCGCTCTCCGTCAAGTGA

Protein

MSAEKRTADDEKAAGECDGDDPENWIGPMPSEAVKPKQKKRKVLEFETLYLENLPSSETYERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHEYNFPKTVRFQSKLDTDLYDFVKNKTCPTALDFSPDGRKMASISLDRKVRVFHFLTGKLHKVIDESLQRFQELQHQTQQLPNMEFGRRMATERDLEKSECVSLGNVAFDCSGHFVLYGTLLGAKLVNLATNRCAATFARTENLRPLHLALFQGRLNQPKVASTLEMEGSENPALLTVKTDPTLFCTAYKKNRFYLFSKRSPDDVKGPDNDRDIFNEKPSKEDIISATEGQGVQRIYEQAVIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRGMEVVQNIGAAKTNPKTDKPYDDIRILSLSVK

Uniprot

H9J3S6   A0A2H1V350   A0A2W1BEC1   A0A2A4K5R6   S4PBM6   A0A2A4K617   + More
A0A194QY77   A0A194PM77   A0A2A4K5M5   A0A3S2P0F4   A0A067RCK7   A0A0L7QNW1   K7IM85   A0A154P049   E9IB56   A0A2A3E4C2   A0A088AAN1   A0A0M9AB00   A0A151X0C4   A0A195DYS1   A0A151IQC1   A0A182NGS0   A0A182Q0Q9   A0A195EVX1   A0A158NB21   A0A026X3A6   F4WCX8   A0A151I1E3   E2A4M6   A0A182F381   A0A182YM79   A0A182TSS4   A0A182IBH5   A0A182JSV3   E2BFS3   A0A1Y9IW23   Q7Q8F0   A0A1C7CZC9   A0A182PJF2   A0A182SSP6   A0A182GT32   Q176W3   W5JLF1   A0A182IQ00   A0A1B6DR82   A0A1Q3F8Z5   A0A182LX12   A0A2S0DSM4   A0A084VCG9   A0A1Q3F9E7   B0W2Y6   A0A336KNQ4   N6U4Y4   A0A0C9R778   A0A1B6HRJ9   A0A139WG42   E0VLT6   A0A1S3ITM9   A0A3B3DR30   A0A182VGK5   Q173W2   A0A3Q3DR08   A0A2G8K6B6   A0A3B4ZLL2   A0A210QBI8   W8BZE3   T1J225   A0A3Q1F9X0   A0A096LTF8   V5HW74   B7PXU5   A0A1S3FVZ1   G1P664   A0A087UYZ0   A0A3P9MAV1   A0A2K5F1L7   S7MFH7   A0A1B6F6A5   A0A2U9B9N5   I3M4L8   A0A250YKG1   H2L9F4   G3HXI5   A0A2K5ZPA0   A0A0D9RTT6   A0A096NP13   A0A2K5IN69   G7P7M2   F7G0S3   A0A2K6CUN3   A0A2K6LHN4   A0A2K6P6U3   A0A3L7I807   A0A2Y9DI38   A0A1U7SR11   F7IRR9   A0A2K6G8D5   L5KLG8   A0A2I2ZR39   G1QTI9  

Pubmed

19121390    28756777    23622113    26354079    24845553    20075255    + More
21282665    21347285    24508170    30249741    21719571    20798317    25244985    12364791    14747013    17210077    20966253    26483478    17510324    20920257    23761445    29190301    24438588    23537049    18362917    19820115    20566863    29451363    29023486    28812685    24495485    25765539    21993624    17554307    28087693    21804562    23929341    22002653    17431167    25319552    25362486    29704459    23258410    22398555   

EMBL

BABH01028842    BABH01028843    ODYU01000451    SOQ35257.1    KZ150162    PZC72691.1    + More
NWSH01000119    PCG79366.1    GAIX01004546    JAA88014.1    PCG79368.1    KQ460949    KPJ10422.1    KQ459598    KPI94541.1    PCG79369.1    RSAL01000070    RVE49185.1    KK852552    KDR21487.1    KQ414843    KOC60327.1    KQ434786    KZC05212.1    GL762111    EFZ22116.1    KZ288392    PBC26344.1    KQ435695    KOX80855.1    KQ982630    KYQ53380.1    KQ980050    KYN18018.1    KQ976782    KYN08326.1    AXCN02002201    KQ981953    KYN32291.1    ADTU01010757    KK107039    QOIP01000006    EZA61879.1    RLU21706.1    GL888074    EGI67959.1    KQ976572    KYM80392.1    GL436710    EFN71628.1    APCN01000690    GL448039    EFN85461.1    AAAB01008944    EAA10133.4    JXUM01086237    KQ563553    KXJ73665.1    CH477381    EAT42209.1    ADMH02001090    ETN64138.1    GEDC01009102    JAS28196.1    GFDL01011005    JAV24040.1    AXCM01009205    KY809867    ATI09792.1    ATLV01010731    KE524607    KFB35663.1    GFDL01010898    JAV24147.1    DS231829    EDS30345.1    UFQS01000650    UFQT01000650    SSX05751.1    SSX26110.1    APGK01049760    KB741156    KB631941    ENN73622.1    ERL87373.1    GBYB01002612    GBYB01002613    GBYB01002615    GBYB01002616    JAG72379.1    JAG72380.1    JAG72382.1    JAG72383.1    GECU01030402    JAS77304.1    KQ971347    KYB26968.1    DS235281    EEB14342.1    CH477416    EAT41334.1    MRZV01000846    PIK43499.1    NEDP02004282    OWF46092.1    GAMC01011960    GAMC01011958    GAMC01011956    GAMC01011954    JAB94599.1    JH431795    AYCK01013843    GANP01003901    JAB80567.1    ABJB010781258    DS816156    EEC11417.1    AAPE02000814    KK122361    KFM82579.1    KE161240    EPQ02561.1    GECZ01024029    JAS45740.1    CP026246    AWP00663.1    AGTP01014029    GFFW01000680    JAV44108.1    JH000876    KE667815    EGW03514.1    ERE84802.1    AQIB01086597    AHZZ02029243    AQIA01059079    AQIA01059080    AQIA01059081    CM001281    EHH54293.1    JSUE03036116    JU333675    CM001258    AFE77430.1    EHH26534.1    RAZU01000096    RLQ73422.1    KB030673    ELK11393.1    CABD030104557    CABD030104558    ADFV01031059   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000027135    + More
UP000053825    UP000002358    UP000076502    UP000242457    UP000005203    UP000053105    UP000075809    UP000078492    UP000078542    UP000075884    UP000075886    UP000078541    UP000005205    UP000053097    UP000279307    UP000007755    UP000078540    UP000000311    UP000069272    UP000076408    UP000075902    UP000075840    UP000075881    UP000008237    UP000075920    UP000007062    UP000075882    UP000075885    UP000075901    UP000069940    UP000249989    UP000008820    UP000000673    UP000075880    UP000075883    UP000030765    UP000002320    UP000019118    UP000030742    UP000007266    UP000009046    UP000085678    UP000261560    UP000075903    UP000264820    UP000230750    UP000261400    UP000242188    UP000257200    UP000028760    UP000001555    UP000081671    UP000001074    UP000054359    UP000265180    UP000233020    UP000246464    UP000005215    UP000001038    UP000001075    UP000030759    UP000233140    UP000029965    UP000028761    UP000233080    UP000009130    UP000233100    UP000006718    UP000233120    UP000233180    UP000233200    UP000273346    UP000248480    UP000189704    UP000008225    UP000233160    UP000010552    UP000001519    UP000001073   

PRIDE

H9J3S6    G3HXI5   

Pfam

PF00160   Pro_isomerase        + More
PF00400   WD40
PF14664   RICTOR_N
PF14668   RICTOR_V
PF14666   RICTOR_M
PF14663   RasGEF_N_2

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR029000   Cyclophilin-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR016024   ARM-type_fold       
IPR029451   RICTOR_M       
IPR029452   RICTOR_V       
IPR028267   Pianissimo_N       
IPR029453   Rictor_IV       
IPR028268   Pianissimo_fam       

SUPFAM

SSF50891   SSF50891        + More
SSF50978   SSF50978       
SSF50998   SSF50998       
SSF48371   SSF48371       

Gene 3D

2.130.10.10     2.40.100.10    

ProteinModelPortal

H9J3S6   A0A2H1V350   A0A2W1BEC1   A0A2A4K5R6   S4PBM6   A0A2A4K617   + More
A0A194QY77   A0A194PM77   A0A2A4K5M5   A0A3S2P0F4   A0A067RCK7   A0A0L7QNW1   K7IM85   A0A154P049   E9IB56   A0A2A3E4C2   A0A088AAN1   A0A0M9AB00   A0A151X0C4   A0A195DYS1   A0A151IQC1   A0A182NGS0   A0A182Q0Q9   A0A195EVX1   A0A158NB21   A0A026X3A6   F4WCX8   A0A151I1E3   E2A4M6   A0A182F381   A0A182YM79   A0A182TSS4   A0A182IBH5   A0A182JSV3   E2BFS3   A0A1Y9IW23   Q7Q8F0   A0A1C7CZC9   A0A182PJF2   A0A182SSP6   A0A182GT32   Q176W3   W5JLF1   A0A182IQ00   A0A1B6DR82   A0A1Q3F8Z5   A0A182LX12   A0A2S0DSM4   A0A084VCG9   A0A1Q3F9E7   B0W2Y6   A0A336KNQ4   N6U4Y4   A0A0C9R778   A0A1B6HRJ9   A0A139WG42   E0VLT6   A0A1S3ITM9   A0A3B3DR30   A0A182VGK5   Q173W2   A0A3Q3DR08   A0A2G8K6B6   A0A3B4ZLL2   A0A210QBI8   W8BZE3   T1J225   A0A3Q1F9X0   A0A096LTF8   V5HW74   B7PXU5   A0A1S3FVZ1   G1P664   A0A087UYZ0   A0A3P9MAV1   A0A2K5F1L7   S7MFH7   A0A1B6F6A5   A0A2U9B9N5   I3M4L8   A0A250YKG1   H2L9F4   G3HXI5   A0A2K5ZPA0   A0A0D9RTT6   A0A096NP13   A0A2K5IN69   G7P7M2   F7G0S3   A0A2K6CUN3   A0A2K6LHN4   A0A2K6P6U3   A0A3L7I807   A0A2Y9DI38   A0A1U7SR11   F7IRR9   A0A2K6G8D5   L5KLG8   A0A2I2ZR39   G1QTI9  

PDB

5YZG     E-value=0,     Score=2066

KEGG

101744742    K12736 peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] | (RefSeq) pe

GO

GO:0003755   GO:0000413   GO:0031929   GO:0031932   GO:0071013   GO:0016604   GO:0016018   GO:0005515   GO:0006457   GO:0005524   GO:0006139   GO:0019205   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR13298  

Length:

624

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0352900000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00300

outside

1  -  624

 

 

Pi

20.05761

Theta

20.796732

Tajima's D

-0.954937

CLR

0.584988

CSRT

0.146142692865357

Interpretation

Uncertain