Gene

KWMTBOMO11725  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004187

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]

Location

Bomo_Chr19(+):12772944-12801568      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.683

CDS

ATGCCAGTTCTCGTTTGGGTAAACCTGACCGCGTCGCACTTCCTGAACGTGCTGGCGGGCGGCGTGCTGTACGCGGGCGTGGTGTGCGGCGTGCTCACGGCGGACGTGGCGCTGTTCGAGACGCGCGCGGCCGCCGCCCTGCTGTGCGTCGGCCTGCTGCTGCACTTCGTCAGCGTCGTCGGGGCCGCCTTCGTCTGCAGCTACATCGTGAGAAGCACACAATACGTGGCGTCGGTGTCGGTGATCTCGTACGGGGTGCTGGCATACCCGATACACGCGCTGCGGGGGTTGACCATGCCCGGCGCGCTGAGGCTGCTGACGGGGCTGCTGCCGCACGTGCCGCTCGCCTGGCTGCTGGACGAGCTGAGCGTCTTGGACGGAAACGGTGAGTCGATCACAGTGTCGTCGATAATGAAGTCCCACACGGCCGTCAGCTACTCCGTGTTCGTGAGCCATCTGATGATGCTGGCCCAGATCCTAATATTCTTCTTCCTGAACTGGTATCTGTCTCTGGTCAGACCCGGAAAGTACGGACAAGCTTTACCCTGGTACTTCTTGTTTAAGAAACAATACTGGTCGAAGAACGAAATAGGGCCCAAGTTCGACTCGGACGCCGAGGAGCAGGTGCCGATAGTCAACGACAAGAAGTACTTCGAGGAGCCGCCGCAGAACGCCGAGGTTGGCATCCGGATCTGCAACGTGTCCAAGGTGTTCCAGAATCAGAAAGCCCTCGACAACGTGTCGCTGGATGTGTACAAGGGCGAGATCACCGTGCTGCTGGGACACAACGGCGCCGGCAAGACCACCCTCATGTCCATCATAACCGGTATGATGAGCGCGACCGAGGGTAAGGTGTACGTGAACGGCACGGAGACTGCCTCCCAGCAGAGGGAAGTCCGGAAGCACCTCGGGCTCTGCCCCCAGCACAACCTGTTCTTCCCGGACCTCACCGTGCTCGAACACGTCATGTTCTTCACTATGCTCAGGGGAACATCCTTCAGAGAAGCGAAAGCGTCTTCGAAAGCTCTTCTCGAACAGTTGGGTATCGCGGATAAAGCGAACAGCAACAGCTCCGAGCTGTCCGGCGGCATGATGAGGAGGCTGCAGCTGGCGTGCGCGCTCGCCGGCGACGCGGACGTCCTCATCCTGGACGAGCCCACGTCGGGGCTGGACGTGGAGACCAGGAGGAGCCTGTGGGACCTGTTGCTTAGCGTGCGAGGGTCGCGCACCGTGCTGCTGTCCACGCACTTCATGGAGGAGGCGGACGCGCTGGGTCACCGCGCCGCCGCGCTGCACCACGGCCGGCTGCGCTGCCACGCCTCCACCATGTACCTCAAGAAGGCCATCGGTACGGGATATCGGCTGTCGTTCACGACGATCGGGCTGCCCAACGAGGCGGCCATCACCGCGGCCGTCGCGTCGCTGGTCCCCGAAGTGACCCTCAAGGAGAAGTCGCTGAACACGCTCGCGTACAGTCTGCCGGCCGCGCACGCCCACAGGTTCCCGGACCTCTTCCTGGCGTTAGAGTCGAACCGATCTAAATTGGGCATCGACTCCATCGGCGTGGGCATCTCTACGCTGGAGGAAGTATTCCTGAAACTTTGCAGCGATGTCGACACGATCTTCGCCGACGCCAATGGTGACACCAGCGAAACTGCGGACCACTACCAGGAGCCGCAGAGTAAGAGGCTGACCGGCTTCCCCCTGTACCTCAGACAATTCAATGTCCTAATGAAAAGGCAGTTCAACTACATAATGTCCAAGAAACTCTCATTTTTCTTATTGCAAGTCCTGATACCTATGCTAGTGATCGGCCTGGTCACGGAGTCCGTGAACCACGACTACGGGTCCGCGCGGGCCGACGTCAGCGCGCCCATGACCCTCGACCTGTACAAGGACATCGACGGCCTCAAAGCTTTGTACAACGTGAACCAAGAGGGAGTCAACTTCAAAGCGATCACTAACGCCTACCCGCACGTCAAGTTTGAGGAAAATACAGACATCGTCAATACAACACTGGGCTACGCCAAGGGTGATCCAATGAAGTACATTAAATACGTTCTGGGTGTTGAACTTAATTCCACACATGCAAAGGCATTGTACACGACGACAATCCGGCACGCCGCTCCGATATCGGTGAACGTCCTGACGAACCTGCTGGCGACGCTGCACGCGCCGGCGGCGGGCGCGCGCACGCTCACCGCCGTCAACGAGCCCGTGCGCGCGGAGCTGGCGGCCGCACCCTCCTCCGCGCACTCCTCCGCGCCCTCCGCCAAGGACACTAAACAAGTCTTCGTCGTCCTCCTTTGGATATTTTTAGTGGTTTTCACGATTCTATCGACGACCATAAACGCGGTGTCGCTGCCGTGTGCGGAGCGGGAGTCGGGCGCGCGGCACACGCACGTCATGTCGGGCTGCCCGCCGGAGCTGCACTGGGCCTCCACGCTGCTGTTCCACCTGGCCGTCTGCACCGCGGCGCTGGTCGTCCCCACGCTGGTCATCGCGGCCACCGTCGAACGAGACCAGACCATCAACCAGCCTGGCTTCTTGCTAACGTTCTTCCTAATCTTGGAGCTCGGCGCTATGGCTTTCTTCGCGTTAATATATTTAGTGAGCTTCCACTTCAACGAGACGTCGGCCACTATCGTGCTATCCGCCATCGTTATTATATTCGGCATCTTCACGCCCTCAGTGAGCGTCATCTTCACGATCCTCGATGATGCGAAGGGTGTTACCTACTACGTGTTCTCGGTGATCAACTACGTGGTCCCGCCTCACACCGTGATGGTGGCGAGCGTGCTGGCGGGCATGCGGGCCGTGAACAACGCCATGTGCAAACTGGACTCGGAGTTCTGTTCCATCGCCATCGGGAGACAGATGACCACCGTTTCAAAGGATCTGGATCCGACGTGCTACCTATGCTTCAACGACATCGCCCCCACACGCTTCGTTATAATGCTGTTCGTTCAGTTCGCCTTTTTAATGAGCCTGGTGCTCCTTTCGGAGCGGGGCTGGCTGAACGGCTGCTTCGACGCGCTCATGAACCGCGCCTACCCCGCCGCGCCCCCCGCCGCCTCCCCCTCCGACCTCGTGCGCGCCGAGGCCGCTTACGTCAGCAAGGCGATCACACTGCGTACGTTTTCTTTTTTTTTTATTGCTAGAAGGGTGGACGAGCTCACAGCCCACCTGGTGTTAAGTGGTTACTGGAGCCCATAG

Protein

MPVLVWVNLTASHFLNVLAGGVLYAGVVCGVLTADVALFETRAAAALLCVGLLLHFVSVVGAAFVCSYIVRSTQYVASVSVISYGVLAYPIHALRGLTMPGALRLLTGLLPHVPLAWLLDELSVLDGNGESITVSSIMKSHTAVSYSVFVSHLMMLAQILIFFFLNWYLSLVRPGKYGQALPWYFLFKKQYWSKNEIGPKFDSDAEEQVPIVNDKKYFEEPPQNAEVGIRICNVSKVFQNQKALDNVSLDVYKGEITVLLGHNGAGKTTLMSIITGMMSATEGKVYVNGTETASQQREVRKHLGLCPQHNLFFPDLTVLEHVMFFTMLRGTSFREAKASSKALLEQLGIADKANSNSSELSGGMMRRLQLACALAGDADVLILDEPTSGLDVETRRSLWDLLLSVRGSRTVLLSTHFMEEADALGHRAAALHHGRLRCHASTMYLKKAIGTGYRLSFTTIGLPNEAAITAAVASLVPEVTLKEKSLNTLAYSLPAAHAHRFPDLFLALESNRSKLGIDSIGVGISTLEEVFLKLCSDVDTIFADANGDTSETADHYQEPQSKRLTGFPLYLRQFNVLMKRQFNYIMSKKLSFFLLQVLIPMLVIGLVTESVNHDYGSARADVSAPMTLDLYKDIDGLKALYNVNQEGVNFKAITNAYPHVKFEENTDIVNTTLGYAKGDPMKYIKYVLGVELNSTHAKALYTTTIRHAAPISVNVLTNLLATLHAPAAGARTLTAVNEPVRAELAAAPSSAHSSAPSAKDTKQVFVVLLWIFLVVFTILSTTINAVSLPCAERESGARHTHVMSGCPPELHWASTLLFHLAVCTAALVVPTLVIAATVERDQTINQPGFLLTFFLILELGAMAFFALIYLVSFHFNETSATIVLSAIVIIFGIFTPSVSVIFTILDDAKGVTYYVFSVINYVVPPHTVMVASVLAGMRAVNNAMCKLDSEFCSIAIGRQMTTVSKDLDPTCYLCFNDIAPTRFVIMLFVQFAFLMSLVLLSERGWLNGCFDALMNRAYPAAPPAASPSDLVRAEAAYVSKAITLRTFSFFFIARRVDELTAHLVLSGYWSP

Uniprot

A0A2W1BCS5   A0A2A4K545   A0A194PTT1   A0A212F3T3   A0A194R3K7   A0A2J7RIF3   + More
A0A1B6GJX2   A0A1B6MNY8   A0A067QMM5   A0A1B6GC71   A0A1B6GKN0   A0A1B6HXX1   A0A1B6FUV8   A0A1B6L5W6   A0A2A4JHG4   A0A0A7AS05   T1G4X2   A0A0A9VSY3   A0A161ALT0   A0A1B6GZC0   A0A1W4WY30   A0A1B6GMP0   A0A0A9VVV1   A0A146KLZ7   A0A0A9W0E8   A0A1B6D8R9   T1JGM6   A0A0L8GMY3   A0A210QSG5   A0A3S3QLI1   B4L8N3   A0A1D2NL00   A0A1I8Q220   A0A1Y1JV91   Q16LB6   A0A0L0BW92   F1M2Q5   E0VMF5   M0R7Y5   A0A226DL54   W8AEW5   A0A131Z7N0   A0A0A1X7V3   A0A1Q3FHX7   A0A1Q3FHW2   A0A0A1WS91   A0A1Q3FHU1   A0A1S3A252   A0A2H4KC39   A0A1Q3FHY8   A0A0K8U924   A0A182GWA1   L8J5Q4   K9IQF6   G1PVG9   F6Z1P2   A0A2H4TEN0   A0A182GWA4   Q16LB7   L5LVJ4   A0A1S4FWY8   I3MKK6   A0A1B0DJU5   A0A131Z7J7   E9PWH4   Q6XBG2   E1BCR1  

Pubmed

28756777    26354079    22118469    24845553    23254933    25401762    + More
26823975    28812685    17994087    27289101    28004739    17510324    26108605    15057822    22673903    20566863    24495485    26830274    25830018    26483478    22751099    21993624    19892987    29121518    19468303    15489334    15170222    19393038   

EMBL

KZ150130    PZC73059.1    NWSH01000149    PCG79038.1    KQ459598    KPI94545.1    + More
AGBW02010485    OWR48406.1    KQ460949    KPJ10426.1    NEVH01003500    PNF40610.1    GECZ01007017    JAS62752.1    GEBQ01002309    JAT37668.1    KK853244    KDR09441.1    GECZ01009744    JAS60025.1    GECZ01006770    JAS62999.1    GECU01028202    JAS79504.1    GECZ01015840    JAS53929.1    GEBQ01020917    JAT19060.1    NWSH01001571    PCG70832.1    KF906266    AHK05631.1    AMQM01005314    KB096900    ESO00555.1    GBHO01045258    JAF98345.1    KF669396    AIN44094.1    GECZ01001999    JAS67770.1    GECZ01006109    JAS63660.1    GBHO01045261    GBRD01003190    JAF98342.1    JAG62631.1    GDHC01021046    JAP97582.1    GBHO01045259    JAF98344.1    GEDC01015204    JAS22094.1    JH432211    KQ421117    KOF78343.1    NEDP02002179    OWF51665.1    NCKU01002032    NCKU01000808    RWS10623.1    RWS14067.1    CH933815    EDW08008.2    LJIJ01000013    ODN05940.1    GEZM01100130    JAV53003.1    CH477911    EAT35113.1    JRES01001244    KNC24298.1    AABR07005599    AABR07005600    AABR07005601    AABR07005602    AABR07005603    AABR07005604    DS235307    EEB14561.1    LNIX01000016    OXA45953.1    GAMC01019799    GAMC01019797    GAMC01019795    JAB86760.1    GEDV01001233    JAP87324.1    GBXI01007301    GBXI01005702    JAD06991.1    JAD08590.1    GFDL01007897    JAV27148.1    GFDL01007895    JAV27150.1    GBXI01012776    GBXI01008150    JAD01516.1    JAD06142.1    GFDL01007909    JAV27136.1    KY484773    ASS36015.1    GFDL01007896    JAV27149.1    GDHF01029484    GDHF01021855    GDHF01018869    GDHF01001688    JAI22830.1    JAI30459.1    JAI33445.1    JAI50626.1    JXUM01020746    KQ560580    KXJ81818.1    JH880268    ELR62954.1    GABZ01003538    JAA49987.1    AAPE02041718    KY849620    ATY74505.1    JXUM01020756    JXUM01020757    KXJ81821.1    EAT35112.1    KB107323    ELK30082.1    AGTP01095349    AJVK01001087    GEDV01001234    JAP87323.1    AC126434    AC134434    BC141350    BC141351    AY243471    AAI41351.1    AAP73045.1    GJ062847    DAA15550.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000235965    UP000027135    + More
UP000015101    UP000192223    UP000053454    UP000242188    UP000285301    UP000009192    UP000094527    UP000095300    UP000008820    UP000037069    UP000002494    UP000009046    UP000198287    UP000079721    UP000069940    UP000249989    UP000001074    UP000002281    UP000005215    UP000092462    UP000000589    UP000009136   

PRIDE

F1M2Q5    M0R7Y5    E9PWH4   

Pfam

PF00005   ABC_tran        + More
PF15928   DUF4746

Interpro

IPR017871   ABC_transporter_CS        + More
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       
IPR026082   ABCA       
IPR031827   DUF4746       
IPR026969   ABCA3       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2W1BCS5   A0A2A4K545   A0A194PTT1   A0A212F3T3   A0A194R3K7   A0A2J7RIF3   + More
A0A1B6GJX2   A0A1B6MNY8   A0A067QMM5   A0A1B6GC71   A0A1B6GKN0   A0A1B6HXX1   A0A1B6FUV8   A0A1B6L5W6   A0A2A4JHG4   A0A0A7AS05   T1G4X2   A0A0A9VSY3   A0A161ALT0   A0A1B6GZC0   A0A1W4WY30   A0A1B6GMP0   A0A0A9VVV1   A0A146KLZ7   A0A0A9W0E8   A0A1B6D8R9   T1JGM6   A0A0L8GMY3   A0A210QSG5   A0A3S3QLI1   B4L8N3   A0A1D2NL00   A0A1I8Q220   A0A1Y1JV91   Q16LB6   A0A0L0BW92   F1M2Q5   E0VMF5   M0R7Y5   A0A226DL54   W8AEW5   A0A131Z7N0   A0A0A1X7V3   A0A1Q3FHX7   A0A1Q3FHW2   A0A0A1WS91   A0A1Q3FHU1   A0A1S3A252   A0A2H4KC39   A0A1Q3FHY8   A0A0K8U924   A0A182GWA1   L8J5Q4   K9IQF6   G1PVG9   F6Z1P2   A0A2H4TEN0   A0A182GWA4   Q16LB7   L5LVJ4   A0A1S4FWY8   I3MKK6   A0A1B0DJU5   A0A131Z7J7   E9PWH4   Q6XBG2   E1BCR1  

PDB

5XJY     E-value=3.84359e-72,     Score=694

KEGG

101736702    K05643 ATP-binding cassette, subfamily A (ABC1), member 3 | (RefSeq) ATP-binding cassette sub-family

GO

GO:0016021   GO:0005524   GO:0042626   GO:0043231   GO:0006869   GO:0005319   GO:0097233   GO:0005886   GO:0002244   GO:0016887   GO:0046836   GO:0051861   GO:0005737   GO:0006434   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR19229   PTHR19229:SF98  

Length:

1071

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

247.726720000001

Exp number, first 60 AAs:

39.14472

Total prob of N-in:

0.62841

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  43

TMhelix

44  -  66

inside

67  -  74

TMhelix

75  -  94

outside

95  -  147

TMhelix

148  -  170

inside

171  -  589

TMhelix

590  -  607

outside

608  -  765

TMhelix

766  -  788

inside

789  -  815

TMhelix

816  -  838

outside

839  -  852

TMhelix

853  -  875

inside

876  -  881

TMhelix

882  -  904

outside

905  -  913

TMhelix

914  -  936

inside

937  -  982

TMhelix

983  -  1005

outside

1006  -  1071

 

 

Pi

22.687601

Theta

24.159217

Tajima's D

-1.385914

CLR

1.202744

CSRT

0.0747962601869906

Interpretation

Uncertain