Gene

KWMTBOMO11713  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004177

Annotation

PREDICTED:_oxysterol-binding_protein-related_protein_9_[Bombyx_mori]

Location

Bomo_Chr19(+):12478594-12487125      View in EpiBrowser

Full name

Oxysterol-binding protein      

Location in the cell

Nuclear   Reliability : 3.776

CDS

ATGACAAGAGGCGTGAGACGTGGCTGCGTGAGACTCCGAGCGGCTGTTATCGGTATAGATGATGAAGATGATTCAACATTCACGATTACCGTCGATCACAAGACTTTTCACTTTCAGGCGAGAGACGGCGCTGAACGCGAGCGTTGGGTGAGAGCATTAGAAGACACTATATTGAGGCATGGTAGACGAGAGAGATGGTCCCGATGCGTGCCGGCCCCTAGACACAGACACGGCGACTTGGAGAGGCGCATAGCTGAGGCCGACGCGTATCTACAGATCATGATTGAACTCGTATCTAAAATGAACACAAGGGTATCGGAATTATCAGACCCTCAAGAGAAGGGTAAAGGACAAATTATTCTAGATCATTCTAATGCAATGCTGGACAACATCAAACATTCCATCGTGCTACTACAAATAGCAAAGAACACCGTGAATCCAGTCAACGGAATTTACCAGGGACCAACGAATCCTTCGCAAACACATATCAAACAAAGTGGGGAGATGTCACCACGTGTGGAAATAGGTTCGGAATGCAGAGAGCTGGCAACACCGACACACGACATGCCGGCCTTAGAGGACATAGACACGGCGCGACCCGCCATGTCCTTGCTGGTGCCTGACACGTCGTATTCTTCGTCGGAAGGCGAAGACGACTTTTACGACGCCGATGATGAACCGGCCACTTCCATTCAACCAGGTTCCAGGTTAGTTTTAGAATTTAATTTACTATCGAAGCTAGTGCGAGTCTGCTAA

Protein

MTRGVRRGCVRLRAAVIGIDDEDDSTFTITVDHKTFHFQARDGAERERWVRALEDTILRHGRRERWSRCVPAPRHRHGDLERRIAEADAYLQIMIELVSKMNTRVSELSDPQEKGKGQIILDHSNAMLDNIKHSIVLLQIAKNTVNPVNGIYQGPTNPSQTHIKQSGEMSPRVEIGSECRELATPTHDMPALEDIDTARPAMSLLVPDTSYSSSEGEDDFYDADDEPATSIQPGSRLVLEFNLLSKLVRVC

Similarity

Belongs to the OSBP family.

Uniprot

H9J3T8   A0A2H1VEC1   A0A3S2TL84   A0A212F038   A0A2A4JQI1   A0A2A4JRR8   + More
A0A194R3L8   A0A194QCP8   V5GP21   A0A139WEQ1   A0A139WEI8   A0A1Y1K4Z6   U5EPL9   V5GZE6   A0A1I8NGF5   T1PKE8   A0A1Q3FTW3   A0A2J7PVR0   A0A0L0BTX8   A0A1Q3FTW6   A0A1I8QB59   A0A1L8DMF2   B4J9Z3   A0A1B0G3G0   A0A067RBW7   B4KQ98   A0A1B0AXE3   A0A0J9TXN0   B3N6U0   A0A0J9R980   B4LL66   A0A1L8DM07   A0A2A3E674   D3DMG7   A1Z814   B4NX11   B3MBK9   A0A034VNZ2   A0A0K8W677   A0A0K8U4Z1   Q28YZ8   A0A3B0JLY9   A0A3B0JGS2   A0A0A1WYD5   A0A1W4UZ83   A0A1B6KIG6   W8AWZ7   A0A1B0CFB2   A0A088AUS5   A0A1B6IJQ0   A0A1B6JHP5   A0A0L7QL07   A0A0M4EFC4   A0A1B6KN99   A0A336LPD5   A0A023F2L0   A0A336LKT5   E1ZY55   A0A1A9V2E4   A0A158NBL4   A0A195BGI4   F4X8J4   A0A195FD32   E2C3X1   K7J5X6   A0A0P5LBF9   A0A195C6B8   A0A0P5GIP9   A0A0P4Z312   A0A3Q2NXD6   A0A1L8DLI8   A0A0P5G1A7   A0A0N7ZQM6   A0A0P6ES99   A0A0N7ZRF8   A0A0N8C7J8   A0A0P5CWR4   A0A0P6FJ57   A0A0P6FBU4   A0A0P4ZCV8   A0A0P5V499   A0A232EUM3   A0A0P5CU97   A0A0P5BCD1   A0A0P5NS24   A0A1B6D0N0   A0A0N8E5Y3   A0A0P5T8D3   A0A0P6AJE7   A0A0N8CSQ8   A0A0P5D874   A0A0P5WV16   A0A0P5YU38   A0A0P6DZG8   A0A0P5NZY4   A0A3Q2XDT1   A0A0P4YZD4   A0A0P5DXK1  

Pubmed

19121390    22118469    26354079    18362917    19820115    28004739    + More
25315136    26108605    17994087    24845553    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25348373    15632085    25830018    24495485    25474469    20798317    21347285    21719571    20075255    28648823   

EMBL

BABH01028799    ODYU01002078    SOQ39131.1    RSAL01000070    RVE49171.1    AGBW02011173    + More
OWR47109.1    NWSH01000769    PCG74315.1    PCG74314.1    KQ460949    KPJ10436.1    KQ459185    KPJ03194.1    GALX01002597    JAB65869.1    KQ971354    KYB26369.1    KYB26370.1    GEZM01095975    JAV55230.1    GANO01000122    JAB59749.1    GALX01002598    JAB65868.1    KA648550    AFP63179.1    GFDL01004038    JAV31007.1    NEVH01020943    PNF20427.1    JRES01001351    KNC23433.1    GFDL01004040    JAV31005.1    GFDF01006446    JAV07638.1    CH916367    EDW02580.1    CCAG010013344    KK852607    KDR20354.1    CH933808    EDW09226.2    JXJN01005230    CM002911    KMY92605.1    CH954177    EDV58189.2    KMY92606.1    CH940648    EDW61873.1    GFDF01006714    JAV07370.1    KZ288356    PBC27208.1    BT120036    ADA53575.1    AE013599    BT133169    AAF58878.4    AEZ68797.1    CM000157    EDW89572.1    CH902619    EDV37140.2    GAKP01015422    JAC43530.1    GDHF01005683    JAI46631.1    GDHF01030879    JAI21435.1    CM000071    EAL25815.4    OUUW01000001    SPP74559.1    SPP74560.1    GBXI01010480    JAD03812.1    GEBQ01028727    JAT11250.1    GAMC01017203    GAMC01017202    JAB89353.1    AJWK01009887    AJWK01009888    AJWK01009889    AJWK01009890    AJWK01009891    AJWK01009892    AJWK01009893    GECU01020556    JAS87150.1    GECU01009283    JAS98423.1    KQ414934    KOC59307.1    CP012524    ALC40872.1    GEBQ01027039    JAT12938.1    UFQS01000040    UFQT01000040    SSW98265.1    SSX18651.1    GBBI01003351    JAC15361.1    SSW98266.1    SSX18652.1    GL435171    EFN73904.1    ADTU01011210    KQ976500    KYM83260.1    GL888932    EGI57263.1    KQ981673    KYN38291.1    GL452364    EFN77357.1    GDIQ01172206    JAK79519.1    KQ978219    KYM96409.1    GDIQ01246296    JAK05429.1    GDIP01219874    JAJ03528.1    GFDF01006756    JAV07328.1    GDIQ01254732    JAJ96992.1    GDIP01222129    JAJ01273.1    GDIQ01058603    JAN36134.1    GDIP01219873    JAJ03529.1    GDIQ01107075    JAL44651.1    GDIP01169975    JAJ53427.1    GDIQ01046654    JAN48083.1    GDIQ01051114    JAN43623.1    GDIP01214271    JAJ09131.1    GDIP01105492    JAL98222.1    NNAY01002114    OXU22041.1    GDIP01166576    JAJ56826.1    GDIP01186879    JAJ36523.1    GDIQ01140925    JAL10801.1    GEDC01018143    JAS19155.1    GDIP01118685    GDIQ01058604    JAL85029.1    JAN36133.1    GDIP01135982    JAL67732.1    GDIP01028546    JAM75169.1    GDIP01102583    JAM01132.1    GDIP01161524    GDIP01069546    JAJ61878.1    GDIP01093238    JAM10477.1    GDIP01054648    LRGB01002121    JAM49067.1    KZS09074.1    GDIP01069545    GDIQ01071703    JAM34170.1    JAN23034.1    GDIQ01145471    JAL06255.1    GDIP01219875    JAJ03527.1    GDIP01150235    JAJ73167.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    + More
UP000007266    UP000095301    UP000235965    UP000037069    UP000095300    UP000001070    UP000092444    UP000027135    UP000009192    UP000092460    UP000008711    UP000008792    UP000242457    UP000000803    UP000002282    UP000007801    UP000001819    UP000268350    UP000192221    UP000092461    UP000005203    UP000053825    UP000092553    UP000000311    UP000078200    UP000005205    UP000078540    UP000007755    UP000078541    UP000008237    UP000002358    UP000078542    UP000265000    UP000215335    UP000076858    UP000264820   

PRIDE

H9J3T8    D3DMG7    A1Z814   

Pfam

PF01237   Oxysterol_BP        + More
PF00169   PH
PF03485   Arg_tRNA_synt_N
PF05746   DALR_1
PF00750   tRNA-synt_1d
PF00005   ABC_tran
PF00664   ABC_membrane

Interpro

IPR000648   Oxysterol-bd        + More
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       
IPR018494   Oxysterol-bd_CS       
IPR037239   OSBP_sf       
IPR009078   Ferritin-like_SF       
IPR001412   aa-tRNA-synth_I_CS       
IPR001278   Arg-tRNA-ligase       
IPR014729   Rossmann-like_a/b/a_fold       
IPR036695   Arg-tRNA-synth_N_sf       
IPR009080   tRNAsynth_Ia_anticodon-bd       
IPR008909   DALR_anticod-bd       
IPR035684   ArgRS_core       
IPR005148   Arg-tRNA-synth_N       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR036640   ABC1_TM_sf       
IPR011527   ABC1_TM_dom       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       

SUPFAM

SSF144000   SSF144000        + More
SSF47240   SSF47240       
SSF55190   SSF55190       
SSF47323   SSF47323       
SSF90123   SSF90123       
SSF52540   SSF52540       

Gene 3D

2.30.29.30     3.30.1360.70     3.40.50.620     1.20.1560.10    

CDD

cd00671  ArgRS_core

ProteinModelPortal

H9J3T8   A0A2H1VEC1   A0A3S2TL84   A0A212F038   A0A2A4JQI1   A0A2A4JRR8   + More
A0A194R3L8   A0A194QCP8   V5GP21   A0A139WEQ1   A0A139WEI8   A0A1Y1K4Z6   U5EPL9   V5GZE6   A0A1I8NGF5   T1PKE8   A0A1Q3FTW3   A0A2J7PVR0   A0A0L0BTX8   A0A1Q3FTW6   A0A1I8QB59   A0A1L8DMF2   B4J9Z3   A0A1B0G3G0   A0A067RBW7   B4KQ98   A0A1B0AXE3   A0A0J9TXN0   B3N6U0   A0A0J9R980   B4LL66   A0A1L8DM07   A0A2A3E674   D3DMG7   A1Z814   B4NX11   B3MBK9   A0A034VNZ2   A0A0K8W677   A0A0K8U4Z1   Q28YZ8   A0A3B0JLY9   A0A3B0JGS2   A0A0A1WYD5   A0A1W4UZ83   A0A1B6KIG6   W8AWZ7   A0A1B0CFB2   A0A088AUS5   A0A1B6IJQ0   A0A1B6JHP5   A0A0L7QL07   A0A0M4EFC4   A0A1B6KN99   A0A336LPD5   A0A023F2L0   A0A336LKT5   E1ZY55   A0A1A9V2E4   A0A158NBL4   A0A195BGI4   F4X8J4   A0A195FD32   E2C3X1   K7J5X6   A0A0P5LBF9   A0A195C6B8   A0A0P5GIP9   A0A0P4Z312   A0A3Q2NXD6   A0A1L8DLI8   A0A0P5G1A7   A0A0N7ZQM6   A0A0P6ES99   A0A0N7ZRF8   A0A0N8C7J8   A0A0P5CWR4   A0A0P6FJ57   A0A0P6FBU4   A0A0P4ZCV8   A0A0P5V499   A0A232EUM3   A0A0P5CU97   A0A0P5BCD1   A0A0P5NS24   A0A1B6D0N0   A0A0N8E5Y3   A0A0P5T8D3   A0A0P6AJE7   A0A0N8CSQ8   A0A0P5D874   A0A0P5WV16   A0A0P5YU38   A0A0P6DZG8   A0A0P5NZY4   A0A3Q2XDT1   A0A0P4YZD4   A0A0P5DXK1  

PDB

2D9X     E-value=0.00650716,     Score=91

KEGG

101736036    K20465 oxysterol-binding protein-related protein 9/10/11 | (RefSeq) oxysterol-binding protein-relate

GO

GO:0006869   GO:0005829   GO:0015248   GO:0032934   GO:0005794   GO:0008289   GO:0043231   GO:0016020   GO:0005524   GO:0006420   GO:0004814   GO:0005737   GO:0042626   GO:0016021  

PANTHER

PTHR10972   PTHR11956  

Length:

251

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00062

Exp number, first 60 AAs:

0

Total prob of N-in:

0.19141

outside

1  -  251

 

 

Pi

24.95639

Theta

24.47324

Tajima's D

-0.727951

CLR

0.491645

CSRT

0.192590370481476

Interpretation

Uncertain