Gene

KWMTBOMO11709  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004172

Annotation

Leucine-rich_transmembrane_protein_[Operophtera_brumata]

Location

Bomo_Chr19(-):12294730-12296638      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.848

CDS

ATGCCGAAAACGAATTTGACATTATTGCAATATACATATAGGCTACAGGATTTAAATTTGACAAATAATCAAATTGAGAGAATCGCTGGCTCACCTTTTTACTACCTCGGCAAATTAGAAACCATTGATTTATCTCATAACAGGATTAGCGATCTGGAAGAACTATTTCGTTTTGAAACGCGACCATACAAACTCAACAAATTAGTACTTGCCAACAACAATATAGAAGAACTGCCCCAAGACGCTTTTGACGAACTGTCATCTCTCGTCGAACTCGATCTCTCATACAATCGCATTTCAAATCTGAACGAAGAGCCATTCGCCAATCTATCCAGTCTCGAAACACTAAGACTGAACAATAATTCCATCAAAAACCTAAACGGTGCAGTTAATAACCTTCAAAATCTGAAGCACCTATATTTAAGGGGAAACCAAATACAGCATATCGACGTAGAATCACTTAAAATCATAATACACCTGGAAACGTTCGACGTGTCGAGGAATCAACTCGAAAAAATCAACTCAGTCATGTTCTCGAGGCACTGGAAACACATGGGGGGCCATTCCATTTGTAAAATCATACTGTCCGAAAACCGCATAGCATCATTACCGAATGCATCAATGGAAATATCTGCTAGAAACGTCCGTGACTTGAGACGTTACAGCGTGGATGTGCTGACCGAATTAGATTTGTCGAACAATGAAATAACAGAAATAGCTTACAATGCGTTCCATTCTCTTTTGAAAATGATCTCATTGGATCTATCCCGGAACCAAATTACCGATTTTAGTGTAAACGCTGACGATCTCCAATTCGTAAAGAAACTGAACCTAAGCGGAAACCATATTTTCCAATTATATTACAAGAGCTTCTCGGCAATGGGAAACCTTGAGAATTTGGATCTCTCTCACAACAAACTTTACGAAATACCAGAAACAGCTTTTAAGAATTACTTTAGCCTTAGAATTCTGAATATGACGTTTAATGATATAGACAGCGTTGAGAATTTACGTATAACCAGATTCCATCCCGCTGGAGGTGTTCTGGACTTGTCAAACAACGGCTTGACGCAATTGAGGATACCATATGGTGAAGGAGCCCGTTTGATGATTTTGAGATTACACTCCAATAATATATCAGATGCTAAGCTAATCGAATTGATTCATCAGAACGATCTGAAAAATTTGGATCTCAGTCATAACAAGATACGCGAGCTTAATGACACATCTTTACGTATTCCCGTCAGTCTCAATTATTTAGATATCAGTTTTAACATGATCATTAGAATTGGACCATCATCTTTTTATCGTGCCGGTCATTTGAAAACTCTACGCTTGTCACACAATCAACTGACCAAGATTGAGCATGGAGCATTTCATGGATTATCAGCGCTTCTCAACCTTGATTTGTCTTACAACAAATTTGGGTACTTCAATTCTGAGTGGCTGATGGACCTTAAAAGTTTGGTTGTTCTTTCTCTCAGGAACAACTGGATGCATAATTTGGACTATAAGAGTTGGTTTGGCCACAAACCTGACCTGCGAGTGAATATCGAAGGAAATAGATTGTCTTGTGAGTGGCTTAGCGGTGTGTTGCAGAATTTTAATAACGGCTTCCTGAAGATGCACCCTGTCGTGTTGACGCCAACAATTTCAAGCCACTCTATAGAAGGCATTCCGTGTATCGAAAAAACTGAGGTCCTAAGTCAAATCTACAGCAGTCCGATGATGAGCGATGACCGTCTACTTGTGTCGAACCAGAAGATCCTGGAGGCTGTTAAGGAGCAGACGTATTATCTGCGCAGATACGTCATGCGTTCTCTTGTGGAGGAAACAGAAAGGGCGAAGCTGTAA

Protein

MPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHNRISDLEELFRFETRPYKLNKLVLANNNIEELPQDAFDELSSLVELDLSYNRISNLNEEPFANLSSLETLRLNNNSIKNLNGAVNNLQNLKHLYLRGNQIQHIDVESLKIIIHLETFDVSRNQLEKINSVMFSRHWKHMGGHSICKIILSENRIASLPNASMEISARNVRDLRRYSVDVLTELDLSNNEITEIAYNAFHSLLKMISLDLSRNQITDFSVNADDLQFVKKLNLSGNHIFQLYYKSFSAMGNLENLDLSHNKLYEIPETAFKNYFSLRILNMTFNDIDSVENLRITRFHPAGGVLDLSNNGLTQLRIPYGEGARLMILRLHSNNISDAKLIELIHQNDLKNLDLSHNKIRELNDTSLRIPVSLNYLDISFNMIIRIGPSSFYRAGHLKTLRLSHNQLTKIEHGAFHGLSALLNLDLSYNKFGYFNSEWLMDLKSLVVLSLRNNWMHNLDYKSWFGHKPDLRVNIEGNRLSCEWLSGVLQNFNNGFLKMHPVVLTPTISSHSIEGIPCIEKTEVLSQIYSSPMMSDDRLLVSNQKILEAVKEQTYYLRRYVMRSLVEETERAKL

Similarity

Belongs to the G-protein coupled receptor 1 family.
Belongs to the Toll-like receptor family.

Uniprot

H9J3T4   A0A0L7KQC7   A0A2H1WDY9   A0A2A4JFS5   S4NTC9   A0A212F040   + More
A0A194QE26   A0A0D2X5D9   A0A0D2WX36   A0A2P6SGN3   A0A0D2WUF4   A0A087YQB2   A0A3P9Q2V7   A0A2S2R5K6   A0A3B3YP01   A0A3B5R9Q6   A0A3B5QS14   L1I8L9   A0A315W1G3   A0A0D2UTD6   A0A2P6SHC1   A0A146ZXB2   K7H568   A0A2H8TU71   A0A1W4XAP3   W5NMG6   A0A226EY20   A0A224XH39   A0A1P8C3Y8   A0A0L7LNZ5   A0A1Y1N1E5   A0A3Q3IRY2   A0A1Y1MRB8   A0A2R7WRI7   A0A369RQ21   A0A260YS12   A0A261CFQ0   T1J3Q9   A0A2P4V7H9   E9HEP2   Q18902   J9KX32   A0A2J7R0N6   A0A1B0GPF1   B7P5V9   T1JUP9   T1PHM6   A0A1I8MXN6   A0A1Y1LR74   B3MDZ0   A0A1Y1L0K3   A0A2G5V3R1   A0A087TMU5   A0A0P5SQ96   E2A1E1   A8WTR1   A0A158P3E5   A0A195BID6   L1JYZ8   A0A1B6E1J9   A0A195CD70   A0A210R2N0   A0A147BJ45   A0A195DP96   A0A2H1WSK0   A0A0P6HIA9   A0A164YBP7   E2A9P6   A0A158N8V7   G5CJV8   A0A0P5XDU2   G3PG16   A0A084WJS7   H9J181   A0A0P6CIU7   A0A0P5GME1   D6WRC5   A0A2P6L505   A0A1D1V8K3   A0A182GWJ0   A0A151WLH3   F4WML6   A0A1Y1KTG4   E0VA95   G1NRD1   A0A195CVK3   E9IIM4   A0A2L2YLK1   A0A067R7C0   A0A0J7L688   A0A1Y1KF47   A0A3S2P6L3   A0A0N5CVF8   A0A3Q3MHL5   E0VC27   A0A2J7Q4U1   A0A1W4VZ34   A0A182UJW5   A0A195FNT9  

Pubmed

19121390    26227816    23622113    22118469    26354079    23542700    + More
23201678    29703783    28004739    30042472    26114425    26394399    21292972    9851916    25315136    17994087    20798317    14624247    21347285    28812685    29652888    21827783    24438588    18362917    19820115    27649274    26483478    21719571    20566863    20838655    21282665    26561354    24845553   

EMBL

BABH01028786    JTDY01007346    KOB65276.1    ODYU01007994    SOQ51237.1    NWSH01001571    + More
PCG70831.1    GAIX01012246    JAA80314.1    AGBW02011173    OWR47103.1    KQ459185    KPJ03200.1    KE346375    KJE97639.1    KJE97645.1    PDCK01000039    PRQ57855.1    KE346371    KJE96300.1    AYCK01004920    GGMS01016031    MBY85234.1    JH993190    EKX32427.1    NHOQ01001253    PWA25543.1    KE346377    KJE98246.1    PRQ58036.1    GCES01015363    JAR70960.1    GFXV01005556    MBW17361.1    AHAT01023842    LNIX01000001    OXA61496.1    GFTR01008534    JAW07892.1    KX424937    AOF79114.1    JTDY01000441    KOB77157.1    GEZM01020144    JAV89367.1    GEZM01023766    JAV88201.1    KK855360    PTY22178.1    NOWV01000313    RDD36795.1    NMWX01000827    OZF76206.1    NIPN01000010    OZG21088.1    JH431830    LFJK02001230    POM33246.1    GL732630    EFX69810.1    BX284602    CCD68208.1    ABLF02007606    ABLF02009963    ABLF02009965    NEVH01008227    PNF34397.1    AJVK01059611    ABJB011066243    DS642947    EEC01981.1    CAEY01000780    KA648271    AFP62900.1    GEZM01052581    JAV74405.1    CH902619    EDV37535.2    GEZM01070752    JAV66301.1    PDUG01000002    PIC46380.1    KK115950    KFM66434.1    GDIP01141922    JAL61792.1    GL435760    EFN72767.1    HE601438    CAP23873.1    ADTU01007718    KQ976467    KYM84132.1    JH992969    EKX53569.1    GEDC01005531    JAS31767.1    KQ977935    KYM98660.1    NEDP02000736    OWF55204.1    GEGO01004595    JAR90809.1    KQ980713    KYN14309.1    ODYU01010707    SOQ55987.1    GDIQ01019218    JAN75519.1    LRGB01000930    KZS15088.1    GL437918    EFN69848.1    ADTU01008823    JN180638    AEK86517.1    GDIP01075128    JAM28587.1    ATLV01024054    KE525348    KFB50471.1    BABH01031438    GDIP01007816    JAM95899.1    GDIQ01238327    JAK13398.1    KQ971351    EFA07490.2    MWRG01001781    PRD33665.1    BDGG01000003    GAU96017.1    JXUM01093527    KQ564062    KXJ72853.1    KQ982959    KYQ48657.1    GL888218    EGI64493.1    GEZM01078441    JAV62706.1    DS235005    EEB10301.1    KQ977279    KYN04189.1    GL763494    EFZ19579.1    IAAA01037148    LAA08330.1    KK852657    KDR19221.1    LBMM01000515    KMQ98161.1    GEZM01088340    JAV58255.1    RSAL01000011    RVE53642.1    UYYF01004282    VDN01367.1    DS235045    EEB10933.1    NEVH01018377    PNF23602.1    KQ981382    KYN42215.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000008743    + More
UP000238479    UP000028760    UP000242638    UP000261480    UP000002852    UP000011087    UP000265000    UP000005237    UP000192223    UP000018468    UP000198287    UP000261600    UP000253843    UP000216624    UP000216463    UP000237256    UP000000305    UP000001940    UP000007819    UP000235965    UP000092462    UP000001555    UP000015104    UP000095301    UP000007801    UP000230233    UP000054359    UP000000311    UP000008549    UP000005205    UP000078540    UP000078542    UP000242188    UP000078492    UP000076858    UP000007635    UP000030765    UP000007266    UP000186922    UP000069940    UP000249989    UP000075809    UP000007755    UP000009046    UP000001645    UP000027135    UP000036403    UP000283053    UP000046394    UP000276776    UP000261640    UP000192221    UP000075902    UP000078541   

PRIDE

H9J3T4    H9J181   

Pfam

PF00560   LRR_1        + More
PF13855   LRR_8
PF13516   LRR_6
PF07714   Pkinase_Tyr
PF13306   LRR_5
PF08263   LRRNT_2
PF12799   LRR_4
PF01462   LRRNT
PF00001   7tm_1
PF07679   I-set
PF01463   LRRCT
PF01582   TIR

Interpro

IPR003591   Leu-rich_rpt_typical-subtyp        + More
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR006212   Furin_repeat       
IPR026906   LRR_5       
IPR008266   Tyr_kinase_AS       
IPR000372   LRRNT       
IPR020635   Tyr_kinase_cat_dom       
IPR000719   Prot_kinase_dom       
IPR013210   LRR_N_plant-typ       
IPR025875   Leu-rich_rpt_4       
IPR000483   Cys-rich_flank_reg_C       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR036116   FN3_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR000157   TIR_dom       
IPR035897   Toll_tir_struct_dom_sf       
IPR003961   FN3_dom       

SUPFAM

SSF57184   SSF57184        + More
SSF56112   SSF56112       
SSF48726   SSF48726       
SSF49265   SSF49265       
SSF52200   SSF52200       

Gene 3D

3.80.10.10     2.60.40.10     3.40.50.10140    

CDD

cd00064  FU
cd00063  FN3

ProteinModelPortal

H9J3T4   A0A0L7KQC7   A0A2H1WDY9   A0A2A4JFS5   S4NTC9   A0A212F040   + More
A0A194QE26   A0A0D2X5D9   A0A0D2WX36   A0A2P6SGN3   A0A0D2WUF4   A0A087YQB2   A0A3P9Q2V7   A0A2S2R5K6   A0A3B3YP01   A0A3B5R9Q6   A0A3B5QS14   L1I8L9   A0A315W1G3   A0A0D2UTD6   A0A2P6SHC1   A0A146ZXB2   K7H568   A0A2H8TU71   A0A1W4XAP3   W5NMG6   A0A226EY20   A0A224XH39   A0A1P8C3Y8   A0A0L7LNZ5   A0A1Y1N1E5   A0A3Q3IRY2   A0A1Y1MRB8   A0A2R7WRI7   A0A369RQ21   A0A260YS12   A0A261CFQ0   T1J3Q9   A0A2P4V7H9   E9HEP2   Q18902   J9KX32   A0A2J7R0N6   A0A1B0GPF1   B7P5V9   T1JUP9   T1PHM6   A0A1I8MXN6   A0A1Y1LR74   B3MDZ0   A0A1Y1L0K3   A0A2G5V3R1   A0A087TMU5   A0A0P5SQ96   E2A1E1   A8WTR1   A0A158P3E5   A0A195BID6   L1JYZ8   A0A1B6E1J9   A0A195CD70   A0A210R2N0   A0A147BJ45   A0A195DP96   A0A2H1WSK0   A0A0P6HIA9   A0A164YBP7   E2A9P6   A0A158N8V7   G5CJV8   A0A0P5XDU2   G3PG16   A0A084WJS7   H9J181   A0A0P6CIU7   A0A0P5GME1   D6WRC5   A0A2P6L505   A0A1D1V8K3   A0A182GWJ0   A0A151WLH3   F4WML6   A0A1Y1KTG4   E0VA95   G1NRD1   A0A195CVK3   E9IIM4   A0A2L2YLK1   A0A067R7C0   A0A0J7L688   A0A1Y1KF47   A0A3S2P6L3   A0A0N5CVF8   A0A3Q3MHL5   E0VC27   A0A2J7Q4U1   A0A1W4VZ34   A0A182UJW5   A0A195FNT9  

PDB

4KNG     E-value=1.68075e-18,     Score=229

KEGG

101743631    no KO assigned | (RefSeq) chaoptin

GO

GO:0016021   GO:0016301   GO:0005524   GO:0004713   GO:0004674   GO:0004930   GO:0004721   GO:0008045   GO:0035159   GO:0045087   GO:0007165   GO:0005654   GO:0042567   GO:0005515   GO:0008270   GO:0006810   GO:0042626   GO:0005737   GO:0006434   GO:0043564   GO:0006418   GO:0003824  

Length:

617

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00424

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00036

outside

1  -  617

 

 

Pi

5.586209

Theta

6.541388

Tajima's D

-0.682427

CLR

0.033489

CSRT

0.205289735513224

Interpretation

Uncertain