Silkworm Genome Informatics Database

Gene

KWMTBOMO11704 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004653

Annotation

hypothetical_protein_KGM_07737_[Danaus_plexippus]

Location

Bomo_Chr19(-):11923966-11925068 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.845

CDS

ATGGAGGACGGCCACAAAGGTATTAGAAATGGGGACACATCGACCGATCTGCAGCAAGCATTAAGCGCATTGATTGAAAATTTGATGAAACCAGAATGTTTGAAGAGGGAACTGATATTCGCATTGCTTTTAACCGTAATGGAGGAAGACGAGTTTGTGCTCTTAAAAGATACGGGCGAAACTGCAGATAAATATGAGTATTTATTGAATAAAAAACCGGCGACCTACGAGGCGACATTAATGTTGAGAAATTACAGAAATTTACCACTCAAACTAATCGGATGCGATTTGAACGATATATTTTTGATTGTCGCAACAATACCTCGGTTATATGAAAAATCGTATTCCGTTTGTTTTAATATCAATGAACACATAAAAACAGGGAAATACGGTTTGATCAACGACTTTGAGAATTTAGACGCAATGTTTTTGAATTTCAAAGAGAAAATTGTCATTCCCATGAAAAGTACGATTCTTAATTATCACAGCTTCCCAAGCGGAAACCTTACAGGCCTTCCTGATGACGTATTCCATCAGATAATACTTCTCCTTCCCGTTAAAGACGTTTTGAATCTATCGGAATCGTGTAAAAGAATTCATGGACTCGTAAAAGAGGATAGAATTTGGGCCAGACTTTATACTAGAGATTTTCCTGATAAAAATAAATGCGATGCAGAGGATTGGCGTGATGCGTACAAGGACGTGTACGCTCCTAAACAAGTTGGAAGGGTTCAACTCGACAAGAATGTGCTCCGGGAAAGTTTCCAAGAATTCGGTGGTTTACCGGATCCCCTGAGAGTTTTCGACTCGAGGATGGAGCTACTCCTGTGA

Protein

MEDGHKGIRNGDTSTDLQQALSALIENLMKPECLKRELIFALLLTVMEEDEFVLLKDTGETADKYEYLLNKKPATYEATLMLRNYRNLPLKLIGCDLNDIFLIVATIPRLYEKSYSVCFNINEHIKTGKYGLINDFENLDAMFLNFKEKIVIPMKSTILNYHSFPSGNLTGLPDDVFHQIILLLPVKDVLNLSESCKRIHGLVKEDRIWARLYTRDFPDKNKCDAEDWRDAYKDVYAPKQVGRVQLDKNVLRESFQEFGGLPDPLRVFDSRMELLL

Uniprot

A0A2H1VIX8 A0A194RGH2 A0A0L7KZP5 A0A0L7R7H8 A0A2A3EID0 A0A088AQ27 + More
D6X124

Pubmed

26354079 26227816 18362917 19820115

EMBL

ODYU01002822 SOQ40783.1 KQ460398 KPJ15031.1 JTDY01004001 KOB68728.1 + More
KQ414639 KOC66799.1 KZ288232 PBC31477.1 KQ971367 EFA09391.2

Proteomes

UP000053240 UP000037510 UP000053825 UP000242457 UP000005203 UP000007266 + More

Pfam

PF06881   Elongin_A        + More
PF12937   F-box-like
PF02755   RPEL
PF00646   F-box

Interpro

IPR001810   F-box_dom        + More
IPR010684   RNA_pol_II_trans_fac_SIII_A
IPR036047   F-box-like_dom_sf
IPR004018   RPEL_repeat

SUPFAM

SSF81383 SSF81383

ProteinModelPortal

A0A2H1VIX8 A0A194RGH2 A0A0L7KZP5 A0A0L7R7H8 A0A2A3EID0 A0A088AQ27 + More
D6X124

KEGG

101743455 no KO assigned | (RefSeq) uncharacterized LOC101743455

GO

GO:0070449 GO:0006357 GO:0005515 GO:0016887 GO:0006810 GO:0016021 GO:0042626 GO:0005737 GO:0006434 GO:0043564 GO:0006418 GO:0003824

Length:

276

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15068

Exp number, first 60 AAs:

0.00126

Total prob of N-in:

0.07144

outside

1 - 276

Pi

25.894529

Theta

23.622516

Tajima's D

0.294217

CLR

0.346536

CSRT

0.454877256137193

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics