Gene

KWMTBOMO11702

Annotation

PREDICTED:_uncharacterized_protein_LOC105842184_[Bombyx_mori]

Location

Bomo_Chr19(+):11871119-11872954      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.918

CDS

ATGGATGATTTAAAGTTATATGCCAACAATAAGAACAGCCTCAAAGTTTTACTTGATAGCACAGAGATTTTTACTAGAGACATAGGAATGGAATTTGGCTTAAATAAATGCAATGTGCTTCATTTAACATCTGGAAGGAGAGCTGAGCACCAGAGCGAAGGTCACATACTGTTGAGTGGCTTAAACTTCGAACATTTGAAGGAAGACGAAAATTATAAATACTTAGGTATAGATGAAGCAGGCAAAATAGATCATAAAAGAATTCAGGATCAGGTGAAAAGAGAGTACTTCAAAAGAGTAAAATGCATCACTAACACACAACTTAGCGCGAGAAACCTCATAACGGCCATCAACACTTATGCCACACCAGTTCTTTTATACACGTTTGGAATAATAAACTACAAAAATAGTGACTTAAACAAAATAGATATAAAGACAAGGAAGATACTCACTTTGAATAAAGCCCAACAACAAAAAGCGGATATCGAAAGACTCTATTTACCCATAGAAGAAGGAGGCAGAGGACTTATAAATATAGAAATGTTACACAAAACTCAGATTATTAAATTTAGGCAATATTTAAACAATGAACAGGACCAAATCATAAAAGCAATAGTTAAACACGATAAACATAGAGATAAACATTCAATACACAAAGATGGTAAAAATAATGCAGTAAGAATAGAATTAACAGAAAACAGAAACTACACCGATACTGAAATTAAGAAAGCAGTAATAAAGACTGGCATCAGTAAATGGAAAGAGAAACCGCTACATGGACAATTCCGTTGGTCCGTTATAGAGAAGGGTAATATAGATCGAGAGTATTCGTTCCGCTGGCTTAAGAAACAAATCGTGTCCCCCACGTTAGAATCTTCGGTATTCGCTATACAAGATCAGGCAGTAATTACGAGACAAATAGAAAGAGATATTCTAAAGAAATCTGTCGATGGTAAGTGTCGCCTATGCCTAGCAAAAGACGAGTCCATAGAGCATATAATCTCGGGATGTGAAAAACTGGCCGGCACTTACTATGTGAACAGACATAACAACATAGTAAAGTATATTTGGTGGGCAATAGGAAGAAAACACAATTTTGAATTAGACTCGCTATGGTGGAAGGTGAATTTGACTCAACCTCAGATAAAAGAAAACAGCTCCGCGAAGCTAATGTGGGAGATACCAGTGCAGACGGACGTTACAATAAAGCACAATAGACCAGACATAATATACATAGACAAGACAGAAAATAAAACCTACTTAATAGATATAACTGTACCATCTGACTACAATATAGGACCAAAAGAACTGGAAAAACTTAGTAAATATCACCCCTTAAAAGTAGAACTAACACGACTCTGGAATACACACACAGAAACCATCCCCATAGTAATAGGCGCAACGGGCGTGGTGGCAAAAAGTATACATAGATACATAGACAAACTGGAGGCAAATATAAACATACACATAATACAAAAACAAGCAGCCATACACACATGCACAATAATAAGTAAAGTTTTGGGTAATACAGTTTTCATAAATTCAAGGGAGTCCGAACCTCCTCTTCCCTGA

Protein

MDDLKLYANNKNSLKVLLDSTEIFTRDIGMEFGLNKCNVLHLTSGRRAEHQSEGHILLSGLNFEHLKEDENYKYLGIDEAGKIDHKRIQDQVKREYFKRVKCITNTQLSARNLITAINTYATPVLLYTFGIINYKNSDLNKIDIKTRKILTLNKAQQQKADIERLYLPIEEGGRGLINIEMLHKTQIIKFRQYLNNEQDQIIKAIVKHDKHRDKHSIHKDGKNNAVRIELTENRNYTDTEIKKAVIKTGISKWKEKPLHGQFRWSVIEKGNIDREYSFRWLKKQIVSPTLESSVFAIQDQAVITRQIERDILKKSVDGKCRLCLAKDESIEHIISGCEKLAGTYYVNRHNNIVKYIWWAIGRKHNFELDSLWWKVNLTQPQIKENSSAKLMWEIPVQTDVTIKHNRPDIIYIDKTENKTYLIDITVPSDYNIGPKELEKLSKYHPLKVELTRLWNTHTETIPIVIGATGVVAKSIHRYIDKLEANINIHIIQKQAAIHTCTIISKVLGNTVFINSRESEPPLP

Uniprot

H3AYE9   A0A2J7PDQ6   E0W0M4   E0VPJ4   E0VSD9   E0VA19   + More
E0W0H3   A0A2J7PIT9   E0VPK6   A0A1S3DB34   A0A1S4EQ35   A0A3B3I0I7   A0A3P9MNJ5   W8BF34   A0A3P8PU69   H3A710   A0A3B5PPD0   A0A3P8NFL6   A0A3B3HW39   A0A3B3I5C9   A0A3B3HU40   A0A3P8QRC6   A0A3P8QAR5   A0A3B3H8G1   A0A3P8R5E8   A0A3P8PU63   A0A3P8NVY4   A0A3P8QC13   A0A3P8NT65   A0A2P2HZD8   A0A2H1VUG2   A0A3P9LVD0   A0A3P8P1I6   A0A3P9QFG6   A0A3P8PST2   A0A3P8P9Q9   A0A3P8QRQ3   A0A3P9MMW4   A0A3P8NRB8   A0A3P8Q3U1   A0A3P8QPZ9   A0A3P8Q8N4   A0A3P8PUT7   A0A3P8QTM2   A0A3P8PSV9   A0A3P8NLS5   A0A3P9M4C8   A0A3P9DUW1   A0A3B3H9G8   A0A3P8NKM6   A0A3P8P8J8   A0A3P8PIV2   A0A3B3HQX9   A0A0S7ESG3   A0A3P8QK92   A0A3S2LN57   A0A3P8QJR1   A0A3P8PQZ9   A0A3P8P1Q8   A0A3P8Q816   A0A3B3ILW9   A0A3P9K6Z6   H3B0S5   A0A3P8NH43   D7GYL6   A0A3B3HNT5   A0A3B3HQ99   H2ZWF0   Q76IN5   A0A1Y1MT60   H2ZUK9   H3AA24   H3AB60   H3A541   W8AXW6   A0A336M9S3   H2ZXX1   R4GD69   H3BBL0   A0A1S3DFN1   A0A2I4AQW5   A0A3B3H9C1   R4GBE7   D7GYE3   R4GAG7   A0A1S3CYA3   H3B0R3   A0A3S2ND61   A0A3B3HDB2   H3AWP0   H3A107   H3A543  

Pubmed

9215903    20566863    17554307    24495485    23542700    25186727    + More
18362917    19820115    12949131    28004739    21881562   

EMBL

AFYH01132769    NEVH01026385    PNF14463.1    DS235861    EEB19180.1    DS235366    + More
EEB15300.1    DS235750    EEB16295.1    DS235004    EEB10225.1    DS235859    EEB19129.1    NEVH01024955    PNF16260.1    EEB15312.1    GAMC01018221    JAB88334.1    AFYH01245796    IACF01001441    LAB67141.1    ODYU01004516    SOQ44481.1    GBYX01473740    JAO07919.1    RSAL01001347    RVE40825.1    AFYH01092381    AFYH01092382    GG695857    EFA13462.1    AFYH01259886    AB097127    BAC82595.1    GEZM01022180    JAV88769.1    AFYH01268965    AFYH01207636    AFYH01227415    AFYH01248595    GAMC01016897    JAB89658.1    UFQT01000728    SSX26770.1    AFYH01264165    AFYH01052121    AAWZ02019863    GG695465    EFA13373.1    AFYH01017561    RSAL01000200    RVE44451.1    AFYH01142702    AFYH01142703    AFYH01248007   

Proteomes

UP000008672    UP000235965    UP000009046    UP000079169    UP000001038    UP000265180    + More
UP000265100    UP000002852    UP000242638    UP000265160    UP000283053    UP000007266    UP000001646    UP000192220   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR001611   Leu-rich_rpt       
IPR012337   RNaseH-like_sf       

SUPFAM

SSF53098   SSF53098       

ProteinModelPortal

H3AYE9   A0A2J7PDQ6   E0W0M4   E0VPJ4   E0VSD9   E0VA19   + More
E0W0H3   A0A2J7PIT9   E0VPK6   A0A1S3DB34   A0A1S4EQ35   A0A3B3I0I7   A0A3P9MNJ5   W8BF34   A0A3P8PU69   H3A710   A0A3B5PPD0   A0A3P8NFL6   A0A3B3HW39   A0A3B3I5C9   A0A3B3HU40   A0A3P8QRC6   A0A3P8QAR5   A0A3B3H8G1   A0A3P8R5E8   A0A3P8PU63   A0A3P8NVY4   A0A3P8QC13   A0A3P8NT65   A0A2P2HZD8   A0A2H1VUG2   A0A3P9LVD0   A0A3P8P1I6   A0A3P9QFG6   A0A3P8PST2   A0A3P8P9Q9   A0A3P8QRQ3   A0A3P9MMW4   A0A3P8NRB8   A0A3P8Q3U1   A0A3P8QPZ9   A0A3P8Q8N4   A0A3P8PUT7   A0A3P8QTM2   A0A3P8PSV9   A0A3P8NLS5   A0A3P9M4C8   A0A3P9DUW1   A0A3B3H9G8   A0A3P8NKM6   A0A3P8P8J8   A0A3P8PIV2   A0A3B3HQX9   A0A0S7ESG3   A0A3P8QK92   A0A3S2LN57   A0A3P8QJR1   A0A3P8PQZ9   A0A3P8P1Q8   A0A3P8Q816   A0A3B3ILW9   A0A3P9K6Z6   H3B0S5   A0A3P8NH43   D7GYL6   A0A3B3HNT5   A0A3B3HQ99   H2ZWF0   Q76IN5   A0A1Y1MT60   H2ZUK9   H3AA24   H3AB60   H3A541   W8AXW6   A0A336M9S3   H2ZXX1   R4GD69   H3BBL0   A0A1S3DFN1   A0A2I4AQW5   A0A3B3H9C1   R4GBE7   D7GYE3   R4GAG7   A0A1S3CYA3   H3B0R3   A0A3S2ND61   A0A3B3HDB2   H3AWP0   H3A107   H3A543  

KEGG

105842184    no KO assigned | (RefSeq) uncharacterized LOC105842184

GO

GO:0003964   GO:0016021  

Length:

523

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.62785000000001

Exp number, first 60 AAs:

0.00123

Total prob of N-in:

0.38427

outside

1  -  523

 

 

Pi

6.865318

Theta

5.90465

Tajima's D

-1.071784

CLR

2.709507

CSRT

0.124443777811109

Interpretation

Uncertain