SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11697
Pre Gene Modal
BGIBMGA004141
Annotation
Fork_head_domain-containing_protein_[Operophtera_brumata]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.29
 

Sequence

CDS
ATGGAAGACTGTGATCTCGCCCAGTACCGCGACATGATCATCGAAGGGGAACTACCTCTGGACTTGAGGCCGCCGCCGCGCCTCTATTTACCTCATTACCTGCGCGACGATGGAGATTCAGAATATCCGCAAGACGACACCTACGTCTCCGTGGACGAAGACACGCCAGACTTGCCGCCGCCGTCCAGCGACTCCGAGAGATACGACGCGCCCAGCCCGACCGACAAAAAGCCTGCCTCACCGAAGAAACCCAAACAGAAATCGTCTTCTCAACTCATCAAGCCACCTTATTCGTACATTGCTTTAATAACAATGGCGATTCTTCAGTCGCCGCACAAGAAGCTGACTCTGAGTGGTATTTGTGAGTTCATTATGACAAGATTTCCGTATTATAGAGAAAAGTTTCCGGCGTGGCAGAATTCGATACGGCATAACTTGAGTTTGAACGATTGCTTTATAAAGATTCCACGAGAGCCCGGGAATCCTGGGAAAGGAAACTATTGGACGCTGGACCCGTTGGCCGAGGACATGTTCGACAACGGGAGCTTCCTGAGGCGCCGGAAAAGGTACAAAAGACCGGCTCCTTCGTTACAACACGCTCACGCGGTTGTGGCCATGTTAGCGAGGGAGGCTTACGCTCCGCTGCTGCCTCTACCGTGTTATCTACCGCCCACGCCACTGCTGGCCCTACCTCGTCCGCCTCCAGCAACGCTGCGGCCTGTGCCGCTACCACCAAGGGTTTCCGAGACTACGGAACCTCGCAGTAAGAGATCGCGCAACGGTTTTTCAATAGAGTCCATTATTGGCTCACAAGAGTCAATGTCAGAGCCGAGGAGAAGCGCGTTTTTGCCCCTGCACCCCGGGAACAGTCCGCCCGACGACTGGGCCAGGTGA
Protein
MEDCDLAQYRDMIIEGELPLDLRPPPRLYLPHYLRDDGDSEYPQDDTYVSVDEDTPDLPPPSSDSERYDAPSPTDKKPASPKKPKQKSSSQLIKPPYSYIALITMAILQSPHKKLTLSGICEFIMTRFPYYREKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPLAEDMFDNGSFLRRRKRYKRPAPSLQHAHAVVAMLAREAYAPLLPLPCYLPPTPLLALPRPPPATLRPVPLPPRVSETTEPRSKRSRNGFSIESIIGSQESMSEPRRSAFLPLHPGNSPPDDWAR

Summary

Pfam
PF00250   Forkhead
Interpro
IPR036388   WH-like_DNA-bd_sf        + More
IPR036390   WH_DNA-bd_sf       
IPR018122   TF_fork_head_CS_1       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
SUPFAM
SSF46785   SSF46785       
Gene 3D
PDB
2HDC     E-value=3.0608e-46,     Score=465

Ontologies

Topology

Subcellular location
Nucleus  
Length:
297
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18607
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07326
outside
1  -  297
 
 

Population Genetic Test Statistics

Pi
22.842719
Theta
20.473814
Tajima's D
0.363999
CLR
0
CSRT
0.484875756212189
Interpretation
Uncertain
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