SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11694
Pre Gene Modal
BGIBMGA003969
Annotation
PREDICTED:_putative_phosphatidate_phosphatase_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.874
 

Sequence

CDS
ATGTCTAGAGACGATACGTCAGTTCACATGCTAAGGAGTTTCGTTGGCGACATATTCCTATTGGTCGGACTATTGGTGTGTAATCTCTCATTAGAGAAGCTATGGGTTCAAACGCATCGGGGTTTCTTCTGTGGCGACGAGAGCTTAATGCTCCCATACAGAGACGACACAGTTACGGAATTAGTGCTGAGAATAATTGGAATAATCCCGCCTAGTATATTAATTTTAATCTTCGAGTGGACTCTTCTGCGCAAGGAACGCAGCGCAAGATGTTTCTCCATACCCGTCCCGTGGTGGGTGAGAAGTTCCTTTGGCATTCTTATGTCGTTCTCGGTCGGGTTTTGCTTCAATGAAATATTTACGAACATGGGAAAGAAAGTCATTGGAAGACTTAGACCACATTTCTTTGATTTATGCAAGCCTTCAGTGGACTGCAGTTTGCCAACTGACTTCGGTCGGTACATCGCTCCGAATGAGTACACATGCACAGCCGAAACTCCACTCTTGACTGATAATTTAAGAAAATCATTCCCCAGCGGACATTCTTCGAGTATCGCCTACACTGCGATTTTTATAGCTATATACTTAGAAAGGCGCTCAGTGTGGAAGAACCACAGGATCTTTCGCCACACTATTCAGTTGGCATTTTTACTGATGAGTTGGTACGTCGCCTTATCAAGAATAACAGACTTTAAGCATCACTGGAGCGATGTTCTATGTGGATATGCTCTGGGAATGTTCATCGCTCTATTTATGGCTGTAAGAGGAACTGAGCTCATTGAGGCGAAGAAAAACAATTCATCACCAGCACACGAAGTTAACCTTAATCATCAAGAACTGCCTATTAGTGCGTGA
Protein
MSRDDTSVHMLRSFVGDIFLLVGLLVCNLSLEKLWVQTHRGFFCGDESLMLPYRDDTVTELVLRIIGIIPPSILILIFEWTLLRKERSARCFSIPVPWWVRSSFGILMSFSVGFCFNEIFTNMGKKVIGRLRPHFFDLCKPSVDCSLPTDFGRYIAPNEYTCTAETPLLTDNLRKSFPSGHSSSIAYTAIFIAIYLERRSVWKNHRIFRHTIQLAFLLMSWYVALSRITDFKHHWSDVLCGYALGMFIALFMAVRGTELIEAKKNNSSPAHEVNLNHQELPISA

Summary

EMBL
KQ459185    KPJ03211.1    KQ460949    KPJ10452.1    ODYU01000841    SOQ36212.1    + More
AK401932    BAM18554.1    RSAL01000136    RVE46219.1    GDQN01002683    GDQN01001775    JAT88371.1    JAT89279.1    NWSH01003423    PCG66334.1    AGBW02005277    OWR55305.1    GAIX01005398    JAA87162.1    ODYU01000021    SOQ34090.1    OWR55302.1    RVE46217.1    NWSH01000947    PCG73418.1    NNAY01000614    OXU27387.1    JXUM01023906    JXUM01023907    JXUM01023908    JXUM01023909    GAPW01002201    KQ560674    JAC11397.1    KXJ81330.1    JXUM01035044    JXUM01035045    JXUM01035046    JXUM01035047    JXUM01035048    JXUM01035049    KQ561046    KXJ79901.1    GFDL01008088    JAV26957.1    DS231813    EDS25757.1    GL442284    EFN63667.1    CH477433    EAT41005.1    KQ414657    KOC65831.1    GL451577    EFN78977.1    AAZX01007073    AAZX01015686    AAZX01017394    AXCN02000966    KQ981285    KYN43217.1    CVRI01000059    CRL03032.1    KM507105    AKM28429.1    KQ978344    KYM94805.1    UFQT01001933    SSX32172.1    AAAB01008882    EAA08723.4    GGFL01001029    MBW65207.1    GGFL01001030    MBW65208.1    ATLV01023054    KE525340    KFB48359.1    ADTU01002785    ADTU01002786    ADTU01002787    ADTU01002788    ADTU01002789    GGFK01010064    MBW43385.1    GBHO01017401    GDHC01017279    GDHC01000397    JAG26203.1    JAQ01350.1    JAQ18232.1    GGFM01004431    MBW25182.1    KQ976693    KYM77648.1    KQ982431    KYQ56455.1    ABLF02025451    GBRD01017873    JAG47954.1    GL888065    EGI68412.1    DS235442    EEB15795.1    KK107231    QOIP01000009    EZA55072.1    RLU18933.1    KK853284    KDR08980.1    GFXV01006855    MBW18660.1    ACPB03006494    GDAI01000228    JAI17375.1    GANO01001369    JAB58502.1    GDHC01018237    JAQ00392.1    GFJQ02001067    JAW05903.1    GBHO01017402    GBHO01017399    JAG26202.1    JAG26205.1    CP012524    ALC41817.1    NEVH01006994    PNF36111.1    GBRD01017872    JAG47955.1    CH933808    EDW08111.2    GECL01002156    JAP03968.1    GEDC01029613    GEDC01020895    JAS07685.1    JAS16403.1    GFTR01004661    JAW11765.1    CH940662    EDW58718.1    CRL03835.1    CH916367    EDW01213.1    GEBQ01026846    JAT13131.1    KRF78429.1    KK119043    KFM74477.1    GAMC01005437    GAMC01005435    JAC01121.1    GECZ01006414    JAS63355.1    KRG03912.1    GEDC01028997    GEDC01004598    JAS08301.1    JAS32700.1    GFWV01022020    MAA46748.1    EZ422699    ADD18975.1    GBXI01000199    JAD14093.1    GAMC01005436    JAC01120.1    OUUW01000002    SPP76338.1    GEDC01021603    GEDC01011468    JAS15695.1    JAS25830.1    KPJ10451.1    GFDG01004345    JAV14454.1    PZQS01000003    PVD33358.1    CH963849    EDW74093.1    GFDG01000241    JAV18558.1    GFDG01000242    JAV18557.1    GFDG01000240    JAV18559.1    CH902619    KPU76357.1    GL732548    EFX80182.1   
Pfam
PF01569   PAP2
Interpro
IPR036938   P_Acid_Pase_2/haloperoxi_sf        + More
IPR000326   P_Acid_Pase_2/haloperoxidase       
SUPFAM
SSF48317   SSF48317       

Ontologies

Topology

Length:
284
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
110.05909
Exp number, first 60 AAs:
19.83205
Total prob of N-in:
0.10624
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  32
inside
33  -  60
TMhelix
61  -  83
outside
84  -  97
TMhelix
98  -  120
inside
121  -  206
TMhelix
207  -  225
outside
226  -  234
TMhelix
235  -  254
inside
255  -  284
 
 

Population Genetic Test Statistics

Pi
245.263793
Theta
153.664894
Tajima's D
1.527077
CLR
0.266432
CSRT
0.791410429478526
Interpretation
Uncertain
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