Gene

KWMTBOMO11685  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003974

Annotation

NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_5-like_[Papilio_xuthus]

Location

Bomo_Chr19(-):11259786-11260902      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.291 Nuclear   Reliability : 1.901

CDS

ATGTCTTTGTCGCCGTTCTTTCGCTCACCGTTTACGGATGTTACTGGTGGCATGATTTCCCACCAACTTCTGGGTCGCTGCCAGAAAGAGGAAGCCAGATACATGGATTGTCTAGAAGCTTATGGTTTGGAACGAGGAAAGGTCAAGTGCGCTCATTTGTTCGGCGATTACCATGAATGCTCAACTCTTACCAAACAACTTAAGAGATTTTTGGCAATAAGACATGAGAGGCAGAGACAAATTTCTCAAGGAAAACTTACAGGCGACGAAAAGTATGTGAGCCCCCGTGTGGACAGTTACTAG

Protein

MSLSPFFRSPFTDVTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIRHERQRQISQGKLTGDEKYVSPRVDSY

Uniprot

H9J387   I4DJA5   A0A2A4JRE4   A0A1E1W6X9   A0A2H1VWD5   A0A194R3Q3   + More
A0A212F879   S4PH09   H9J388   A0A0L7LIC6   A0A194QCT3   A0A3S2L5K1   A0A3S2NQX0   A0A2H1VUN4   A0A212F858   A0A0K8TPV2   B4LU70   B4MTU9   T1H6N3   A0A2P8YI02   A0A1I8PLW3   D6WSS5   A0A2J7R5F6   B3MUC9   A0A1W4UQT0   A0A182YDI1   A0A084WG33   A0A182RHA9   A0A182SBR2   Q29MZ9   B4G8F6   A0A2C9GR20   A0A182V0K2   A0A182K4A0   A0A182TFB2   A0A182KTU2   Q7Q1E9   B4JB75   A0A2M4A7T6   A0A2M4A7Y1   B3N783   W5J757   A0A2M4A884   A0A2M4A8C2   A0A1L8EEW0   A0A2M4CT70   B4ICS8   B4Q5N2   Q7K1C0   Q6XHP2   A0A182P312   A0A3B0K013   B4KHE9   A0A0L0C8G2   A0A2M3Z3V9   A0A2M4C4V4   A0A0A1WEN5   A0A182NC00   A0A182M7T3   A0A1A9WKV3   U5ER62   T1E3A6   A0A182R0K2   T1DFV9   B0W1B8   A0A1Q3FKM1   A0A182WGQ1   A0A182J1C8   A0A067RQI7   A0A023EER4   A0A2A4JPM8   A0A1Y1KBU5   A0A1W4XHU9   A0A182XGD5   W8BJJ8   Q1HRI5   A0A182F526   A0A1A9XFQ6   A0A1B0B7S7   A0A1A9UPZ1   A0A1I8N3D0   A0A0K8W277   A0A0C9RII6   A0A034VUV8   A0A1A9ZDF6   A0A1B0FDY5   A0A224XQN7   A0A336MC26   A0A1B0GKA9   A0A1L8E057   A0A1B6HT30   N6UCU1   U4UC75   A0A1Y1KT14   A0A0P4WPV6   A0A1B6FJI4   A0A224XQR1   A0A0A9XIK0   A0A1B6DI93   A0A2R7WN68  

Pubmed

19121390    22651552    26354079    22118469    23622113    26227816    + More
26369729    17994087    18057021    29403074    18362917    19820115    25244985    24438588    15632085    20966253    12364791    14747013    17210077    20920257    23761445    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14525923    17550304    26108605    25830018    24330624    24845553    24945155    26483478    28004739    24495485    17204158    17510324    25315136    25348373    23537049    25401762    26823975   

EMBL

BABH01021739    AK401373    KQ459185    BAM17995.1    KPJ03230.1    NWSH01000825    + More
PCG73992.1    GDQN01008347    JAT82707.1    ODYU01004536    SOQ44524.1    KQ460949    KPJ10471.1    AGBW02009781    OWR49931.1    GAIX01005975    JAA86585.1    BABH01021738    JTDY01000952    KOB75308.1    KPJ03229.1    RSAL01000136    RVE46229.1    RVE46228.1    SOQ44523.1    OWR49932.1    GDAI01001445    JAI16158.1    CH940649    EDW64057.1    KRF81400.1    CH963852    EDW75538.1    PYGN01000580    PSN43870.1    KQ971352    EFA07503.1    NEVH01006994    PNF36066.1    CH902624    EDV33458.1    ATLV01023436    KE525343    KFB49177.1    CH379060    EAL33544.1    CH479180    EDW28636.1    APCN01001735    AAAB01008980    EAA14312.2    CH920880    CH916368    EDV90327.1    EDW03967.1    GGFK01003532    MBW36853.1    GGFK01003585    MBW36906.1    CH954177    EDV57190.1    KQS69902.1    ADMH02002127    ETN58619.1    GGFK01003692    MBW37013.1    GGFK01003661    MBW36982.1    GFDG01001583    JAV17216.1    GGFL01004193    MBW68371.1    CH480829    EDW45354.1    CM000361    CM002910    EDX03182.1    KMY87251.1    AE014134    AY069186    BT081978    AAF51538.1    AAL39331.1    AAN10510.1    ACO53093.1    ACZ94133.1    ACZ94134.1    AFH03492.1    AGB92329.1    AGB92332.1    AGB92333.1    AY232141    CM000157    AAR10164.1    EDW87098.1    OUUW01000004    SPP78956.1    CH933807    EDW11213.1    JRES01000753    KNC28728.1    GGFM01002453    MBW23204.1    GGFJ01011030    MBW60171.1    GBXI01016818    JAC97473.1    AXCM01003376    GANO01003911    JAB55960.1    GALA01000014    JAA94838.1    AXCN02000695    GAMD01003006    JAA98584.1    DS231821    EDS44988.1    GFDL01006918    JAV28127.1    KK852527    KDR22009.1    JXUM01042041    JXUM01074476    GAPW01006429    KQ562831    KQ561308    JAC07169.1    KXJ75051.1    KXJ79044.1    PCG74007.1    GEZM01087005    JAV58919.1    GAMC01007628    GAMC01007625    JAB98927.1    DQ440109    CH477825    ABF18142.1    EAT35870.1    EAT35871.1    JXJN01009707    GDHF01007344    JAI44970.1    GBYB01008060    JAG77827.1    GAKP01013631    GAKP01013629    GAKP01013627    GAKP01013624    JAC45323.1    CCAG010021136    GFTR01001609    JAW14817.1    UFQS01000888    UFQT01000888    SSX07505.1    SSX27845.1    AJWK01028622    GFDF01001944    JAV12140.1    GECU01029859    JAS77847.1    APGK01028665    KB740694    ENN79485.1    KB632194    ERL89898.1    GEZM01074769    JAV64474.1    GDRN01052275    JAI66318.1    GECZ01019424    JAS50345.1    GFTR01001581    JAW14845.1    GBHO01023785    GBRD01009436    GDHC01007457    JAG19819.1    JAG56388.1    JAQ11172.1    GEDC01024609    GEDC01011894    JAS12689.1    JAS25404.1    KK855038    PTY20440.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000037510    + More
UP000283053    UP000008792    UP000007798    UP000015102    UP000245037    UP000095300    UP000007266    UP000235965    UP000007801    UP000192221    UP000076408    UP000030765    UP000075900    UP000075901    UP000001819    UP000008744    UP000075840    UP000075903    UP000075881    UP000075902    UP000075882    UP000007062    UP000001070    UP000008711    UP000000673    UP000001292    UP000000304    UP000000803    UP000002282    UP000075885    UP000268350    UP000009192    UP000037069    UP000075884    UP000075883    UP000091820    UP000075886    UP000002320    UP000075920    UP000075880    UP000027135    UP000069940    UP000249989    UP000192223    UP000076407    UP000008820    UP000069272    UP000092443    UP000092460    UP000078200    UP000095301    UP000092445    UP000092444    UP000092461    UP000019118    UP000030742   

PRIDE

H9J387    H9J388    Q7K1C0   

Pfam

PF10200   Ndufs5        + More
PF05253   zf-U11-48K
PF06602   Myotub-related

Interpro

IPR019342   NADH_UbQ_OxRdtase_FeS-su5        + More
IPR009069   Cys_alpha_HP_mot_SF       
IPR022776   TRM13/UPF0224_CHHC_Znf_dom       
IPR036236   Znf_C2H2_sf       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR039803   MTMR14_PH-GRAM       
IPR010569   Myotubularin-like_Pase_dom       
IPR016130   Tyr_Pase_AS       
IPR039802   MTMR14       

SUPFAM

SSF47072   SSF47072        + More
SSF57667   SSF57667       
SSF52799   SSF52799       

CDD

cd13213  PH-GRAM_MTMR14

ProteinModelPortal

H9J387   I4DJA5   A0A2A4JRE4   A0A1E1W6X9   A0A2H1VWD5   A0A194R3Q3   + More
A0A212F879   S4PH09   H9J388   A0A0L7LIC6   A0A194QCT3   A0A3S2L5K1   A0A3S2NQX0   A0A2H1VUN4   A0A212F858   A0A0K8TPV2   B4LU70   B4MTU9   T1H6N3   A0A2P8YI02   A0A1I8PLW3   D6WSS5   A0A2J7R5F6   B3MUC9   A0A1W4UQT0   A0A182YDI1   A0A084WG33   A0A182RHA9   A0A182SBR2   Q29MZ9   B4G8F6   A0A2C9GR20   A0A182V0K2   A0A182K4A0   A0A182TFB2   A0A182KTU2   Q7Q1E9   B4JB75   A0A2M4A7T6   A0A2M4A7Y1   B3N783   W5J757   A0A2M4A884   A0A2M4A8C2   A0A1L8EEW0   A0A2M4CT70   B4ICS8   B4Q5N2   Q7K1C0   Q6XHP2   A0A182P312   A0A3B0K013   B4KHE9   A0A0L0C8G2   A0A2M3Z3V9   A0A2M4C4V4   A0A0A1WEN5   A0A182NC00   A0A182M7T3   A0A1A9WKV3   U5ER62   T1E3A6   A0A182R0K2   T1DFV9   B0W1B8   A0A1Q3FKM1   A0A182WGQ1   A0A182J1C8   A0A067RQI7   A0A023EER4   A0A2A4JPM8   A0A1Y1KBU5   A0A1W4XHU9   A0A182XGD5   W8BJJ8   Q1HRI5   A0A182F526   A0A1A9XFQ6   A0A1B0B7S7   A0A1A9UPZ1   A0A1I8N3D0   A0A0K8W277   A0A0C9RII6   A0A034VUV8   A0A1A9ZDF6   A0A1B0FDY5   A0A224XQN7   A0A336MC26   A0A1B0GKA9   A0A1L8E057   A0A1B6HT30   N6UCU1   U4UC75   A0A1Y1KT14   A0A0P4WPV6   A0A1B6FJI4   A0A224XQR1   A0A0A9XIK0   A0A1B6DI93   A0A2R7WN68  

PDB

5GUP     E-value=7.7682e-06,     Score=111

KEGG

101743811    K03938 NADH dehydrogenase (ubiquinone) Fe-S protein 5 | (RefSeq) NADH dehydrogenase [ubiquinone] iro

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0003954   GO:0006120   GO:0005747   GO:0004438   GO:0004725  

PANTHER

PTHR13524  

Length:

100

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00597

Exp number, first 60 AAs:

0.00597

Total prob of N-in:

0.03233

outside

1  -  100

 

 

Pi

218.382669

Theta

187.701887

Tajima's D

0.514368

CLR

0.688645

CSRT

0.515674216289186

Interpretation

Uncertain