SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11683
Pre Gene Modal
BGIBMGA003976
Annotation
tyrosine-protein_kinase_receptor_torso_[Bombyx_mori]
Full name
Tyrosine-protein kinase receptor torso       + More
Fibroblast growth factor receptor      
Fibroblast growth factor receptor 3      
Alternative Name
PFR3
Location in the cell
Cytoplasmic   Reliability : 2.067 Nuclear   Reliability : 1.48
 

Sequence

CDS
ATGAAATTAAATAGCCGGTTCAATATTAAAAAACTCGATATATCCCCATTTTATATAATACAGGAAGACCCCGACGAGAAAACGCCCAAAGAAGACGATGTCGAAATCATCGGCATCGAATCGGGCAGCGCAGACGATCGCTGGGAGGTACGCTCGGACCGGGTGCTACTGCACGAAGTTATCGGCGAAGGAGCCTTCGGCGTCGTGCGGAGAGGCACTCTCGCGCCGGGAGGCAAGTCGGTCGCTGTTAAAATGTTAAAAGAATTTCCATCGCAGGAAGAAGTAAGGTCTTTTCGGTCTGAGATGGAGTTGATGAAGAGTGTAGGTGCTCATCCCCATGTTGTCAGTTTAGTTGGATGTTGTAGTGGACGAAAACCCCTCATTGTCGCTGAATATTGCAGTAGAGGAGATCTCCTCAGCTATTTGAGATGCTCTTGGGACATTATCGTGTCGAAACATACTGCAAAATACTACAATAATAATATGGACAGCATGGACACCTCCAAACTAAAAGTCCATAAAGAACACACAAAGCTTGTCGTTAACAAACTTTACGAGTTACAAGGTCCGTGTGAGACTGAACTAACGCCTTTAGACTTACTCTCTTTCTGTCGTCAAATCGCTATGGGCATGGAATTTTTAGCTGCAAACAGAATTGTACATCGGGACTTGGCTGCTAGAAATGTATTGGTAACTGAAGATAAGACTTTAAAGATAGCAGATTTTGGTCTATCTAGAGATATTTACGAAGAGAATCAGTATAAACAGAAAGGAAACGGTAAGATGCCTGTGAAATGGATGGCATTGGAGTCCTTGACTAGAAGGGTATACACGACGCAGAGTGATGTTTGGTCCTTCGGCGTGGTGATATGGGAGATAGTAACAGTGGGAGGCTCGCCATATCCAGAGGTGCCCGCAGCGCGCTTAGTGAGATCGTTAAGATCCGGTTACAGGATGCCAAAACCGGTCAACTGTAGTAAACCATTGTACGATATTATGAGGGCTTGTTGGAACGCGAGTCCTCGTGACAGGCCTACGTTTCCAGAGTTGCACCAGAAGCTCGACGACCTGCTGCATAGTGCGTGTGCAAACGAATATATAACTCTGGAAGTGGATGTTGACGAAGCACCTTCAACGCCGAAACCGCAAAGATACATCAAAATGTTGATCAGGGGCAAATTACCTTGGAGTCGTGAAAGTTACGAACGTCCTGTGAATCCAACAAGCAATCTGTACTCTTCGCCGCCGGTCATACAAACTAAAACCGCATGA
Protein
MKLNSRFNIKKLDISPFYIIQEDPDEKTPKEDDVEIIGIESGSADDRWEVRSDRVLLHEVIGEGAFGVVRRGTLAPGGKSVAVKMLKEFPSQEEVRSFRSEMELMKSVGAHPHVVSLVGCCSGRKPLIVAEYCSRGDLLSYLRCSWDIIVSKHTAKYYNNNMDSMDTSKLKVHKEHTKLVVNKLYELQGPCETELTPLDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYEENQYKQKGNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVGGSPYPEVPAARLVRSLRSGYRMPKPVNCSKPLYDIMRACWNASPRDRPTFPELHQKLDDLLHSACANEYITLEVDVDEAPSTPKPQRYIKMLIRGKLPWSRESYERPVNPTSNLYSSPPVIQTKTA

Summary

Description
Probable receptor tyrosine kinase. During postembryonic development, involved in the initiation of metamorphosis probably by inducing the production of ecdysone in response to prothoracicotropic hormone (PTTH) (By similarity). Binding to PTTH stimulates activation of canonical MAPK signaling leading to ERK phosphorylation (PubMed:19965758, PubMed:26928300).
Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Phosphorylates PLCG1, CBL and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway (By similarity).
Catalytic Activity
ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]
Cofactor
Mg(2+)
Subunit
Homodimer; disulfide-linked.
Monomer. Homodimer after ligand binding (By similarity).
Similarity
Belongs to the protein kinase superfamily. Tyr protein kinase family.
Belongs to the protein kinase superfamily. Tyr protein kinase family. Fibroblast growth factor receptor subfamily.
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
Keywords
3D-structure   ATP-binding   Cell membrane   Complete proteome   Developmental protein   Disulfide bond   Glycoprotein   Kinase   Magnesium   Membrane   Metal-binding   Nucleotide-binding   Phosphoprotein   Reference proteome   Signal   Transferase   Transmembrane   Transmembrane helix   Tyrosine-protein kinase   Apoptosis   Immunoglobulin domain   Receptor   Repeat  
Feature
chain  Tyrosine-protein kinase receptor torso
EC Number
2.7.10.1
EMBL
GQ477743    ACZ81657.1    BABH01021736    ODYU01004535    SOQ44522.1    LC076477    + More
BAS29645.2    NWSH01000825    PCG74006.1    RSAL01000136    RVE46230.1    AGBW02008079    OWR54183.1    KQ459185    KPJ03227.1    KQ460949    KPJ10470.1    AGBW02009781    OWR49933.1    KQ979294    KYN22004.1    GL452767    EFN76911.1    ADTU01027399    ADTU01027400    ADTU01027401    KQ981193    KYN45094.1    KQ982249    KYQ58830.1    PYGN01000114    PSN53900.1    GEZM01050174    JAV75690.1    GL435089    EFN74006.1    GL888900    EGI57419.1    KQ976554    KYM80805.1    QOIP01000006    RLU21841.1    KK107128    EZA58397.1    KK852718    KDR17781.1    GECZ01022506    JAS47263.1    DS231835    EDS32928.1    KQ971354    EFA07525.1    AY618898    AAU87291.1    KR152228    ALX72397.1    CH477706    EAT37041.1    KU746914    DS469510    AOP31969.1    EDO49315.1    NNAY01001930    OXU22523.1    UFQT01001748    SSX31646.1    JXUM01133095    JXUM01133096    GEGO01003432    JAR91972.1    JYDR01000001    KRY79790.1    JYDP01000002    KRZ18899.1    KRZ18901.1    JYDO01000008    KRZ79179.1    GCES01160986    JAQ25336.1    KRZ79182.1    KRZ79183.1    KRZ18900.1    JYDS01000006    KRZ33929.1    KRZ79184.1    JYDT01000005    KRY92792.1    KRZ33930.1    JYDV01000013    KRZ42674.1    JYDU01000103    KRX92803.1    RCHS01003437    RMX41827.1    KRZ42675.1    IACF01006134    LAB71717.1    EF068147    ABN70838.1    KV926580    PIO35695.1    JYDI01000008    KRY60087.1    GCES01160985    JAQ25337.1    JYDW01000323    KRZ49262.1    KRY60090.1    JYDN01000002    KRX68375.1    KRX68376.1    JYDL01000012    KRX25317.1    JYDM01000136    KRZ85679.1    JYDJ01000370    KRX36351.1    KRY60085.1    KRZ49261.1    KRZ85680.1    JYDQ01000012    KRY22088.1    JYDH01000003    KRY42868.1    KRY22087.1    AGTO01010340    KRX25318.1    JARO02010852    KPP60354.1    GCES01160984    JAQ25338.1    AAEX03002461    ABLF02021638    ABLF02021640    ABLF02021643    ABLF02021646    ABLF02051162    LVZM01021957    OUC41048.1    DQ235692    ABB52005.1    QUSF01000005    RLW09234.1    AGCU01164154    AGCU01164155    AGCU01164156    AGCU01164157    AGCU01164158    AGCU01164159    AGCU01164160    AGCU01164161    AGCU01164162    X75603    NWSH01003526    PCG66164.1    AY737276    AAU89298.1    KB201891    ESO93545.1    JYDK01000005    KRX84680.1    PCG66165.1    AB025537    BAA84727.1    KL670101    KFW78496.1    KRX84675.1    AERX01013706    AERX01013707    KL468555    KFV17964.1    LNIX01000003    OXA57985.1    KRX84677.1   
Pfam
PF07714   Pkinase_Tyr        + More
PF07679   I-set
PF18123   FGFR3_TM
PF00225   Kinesin
PF00047   ig
Interpro
IPR008266   Tyr_kinase_AS        + More
IPR020635   Tyr_kinase_cat_dom       
IPR000719   Prot_kinase_dom       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013098   Ig_I-set       
IPR036179   Ig-like_dom_sf       
IPR016248   FGF_rcpt_fam       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR041159   FGFR_TM       
IPR028174   FGF_rcpt_1       
IPR027417   P-loop_NTPase       
IPR001752   Kinesin_motor_dom       
IPR019821   Kinesin_motor_CS       
IPR036961   Kinesin_motor_dom_sf       
IPR013151   Immunoglobulin       
SUPFAM
SSF56112   SSF56112        + More
SSF49265   SSF49265       
SSF48726   SSF48726       
SSF52540   SSF52540       
Gene 3D
PDB
4K33     E-value=6.20005e-73,     Score=697

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
423
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15357
Exp number, first 60 AAs:
0.00077
Total prob of N-in:
0.02134
outside
1  -  423
 
 

Population Genetic Test Statistics

Pi
82.057074
Theta
58.902378
Tajima's D
0.887145
CLR
1.205889
CSRT
0.633918304084796
Interpretation
Uncertain
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