Gene

KWMTBOMO11680  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003977

Annotation

seryl-tRNA_synthetase_[Helicoverpa_armigera]

Location

Bomo_Chr19(-):11161832-11167822      View in EpiBrowser

Full name

Phospholipid-transporting ATPase      

Location in the cell

Cytoplasmic   Reliability : 3.504

CDS

ATGGTCCTCGACTTAGACTTATTTCGTGCCGATAAAGACGGTAATCCAGATAAAATTCGAGAAAATCAGAAGAAGAGATTTAAAGATGTTGCCCTTGTGGATGCAGTCGTCGAGCAAGACACCTTGTGGAGGAAATTGCGCCACGAAGCTGACAATTTCAATAAACTGAAGAATGTATGTAGCAAAGAAATTGGTTTGAAAATGAAGAACAAGGAACCCAGTGGCTCTGAAGACGAACCCGTCCCCTCGGAGATCGCCAATAACCTGGTAAACCTCACCGGCGATAACTTGAAGCCTCTCACAGTAAATCAAATAAAAAAAGTAAGAGTATTAATAGATAATGCAATATCAAAGAATGATGAAGGGTTATTGGCTGCTGAGAAAGCGCGTTCCGCTGCACTCAGGGAAGTTGGAAATCATCTGCATGAGTCTGTACCAGTTGATGATGATGAAGACCATAACTTGGTAGAAAGGACAGACGGAGACTGCGGCTTTAGAAAAAAGTACTCTCATGTGGATCTGATCTGCATGATTGATGGAATGGATGGAGAGAGGGGATCAGCTGTAGCAGGTGGTCGTGGTTATTATCTGAAAGGTCCTGCAGTATTCCTAGAACAAGCCCTCGTTCAACTTTCTCTAAGAATGTTACTTGAGAAAGGATATACGCCCTTGTACACACCATTCTTCATGCGAAAAGAGGTTATGCAAGAGGTAGCACAACTAGCTCAATTTGACGAAGAACTGTACAAAGTCATAGGGAAAGGTTCTGAAAACAAGGGCGACACTGTTGTCGAAGAGAAATACCTTATCGCTACATCAGAACAGCCCATAGCTGCTTTCCACAGGGATGAATGGCTTCCAGAATCATCTCTTCCCATCAAATATGCGGGACTCTCCACATGCTTCAGACAAGAGGTTGGATCTCATGGACGTGACACGCGTGGTATCTTTCGAGTACATCAATTTGAAAAGGTGGAACAATTTGTTCTAACATCTCCTCATGATAACGCATCTTGGCAAATGATGGACGAAATGATAAACAATGCTGAAGAGTTCTGCAAAGCACTAGGACTACCGTACCGTGTCGTGAACATCGTGTCTGGAGCTCTAAACCATGCAGCTTCCAAGAAGCTAGACTTGGAGGCCTGGTTCCCAGGATCCGGTGCGTTCAGGGAACTTGTCTCTTGTAGTAACTGTCTGGAGTACCAAGCCAGAAGATTGCTTGTAAGGTACGGTCAGACGAAAAAGATGAACGCTGCCACTGAATACGTGCACATGCTGAACGCGACCATGTGCGCCACCACCAGGGTCATTTGCGCCATACTCGAGGTACACCAGACAGAGGACGGCATCAAGGTACCGGAAATCCTCAAACCTTGGCTTCCCAAGCAGTATCAAGAATTAATACCGTTCGTGAAACCCGCACCCATTGACGTGGAGGCGGCCGCTGCAGCCAAAAAAGGAAAGAAACAAGAAAAAAAATGA

Protein

MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVFLEQALVQLSLRMLLEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGSENKGDTVVEEKYLIATSEQPIAAFHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVEAAAAAKKGKKQEKK

Catalytic Activity

ATP + H(2)O + phospholipid(Side 1) = ADP + phosphate + phospholipid(Side 2).

Similarity

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.

Uniprot

H9J390   A0A1Q1NKM3   A0A2A4JRF4   F5BYI3   A0A212FP04   S4PBU6   + More
A0A194QYC5   A0A194QE52   A0A2H1WKB7   D6WPN5   V5G2R2   A0A023EUD5   A0A182H102   A0A034W3A2   Q17BB4   A0A0K8UEC4   B3MLK1   B4LT21   A0A1I8NUR4   A0A182Y3H4   T1PCX4   W8C4I5   A0A1Y9IVD4   A0A182MGD1   A0A336K0V3   A0A182L0Y8   A0A182PCN7   A0A182U5J4   A0A182XL45   Q7Q472   A0A084W4U4   A0A0A1WKE4   A0A182UVZ2   A0A1Q3FWW8   I4DR04   A0A182R300   A0A182JCI2   A0A0M4E484   N6UHC9   A0A182JY99   B3NAQ0   Q9VQL1   A0A0J9QUR7   B4NXD0   B4KIL0   B4MW20   E9IT38   A0A1W4X9B1   A0A182QZF7   J3JW01   B4I2U9   A0A182MYY5   A0A0L0CNE4   U5EUR8   A0A2J7QMI2   Q29M02   B4G6Y9   A0A2M4BL64   A0A026WP56   A0A151J2G2   E2B6U7   A0A158NZV6   F4WID2   A0A1W4V624   B4JA65   A0A3B0JFT2   A0A1Y1MTB5   A0A2M3Z4B5   A0A195CM19   K7J967   A0A0C9RPV5   W5JCC0   A0A195BMI9   A0A195F380   A0A0K8TQS8   A0A1B0FRC0   E2ADM4   A0A182F4A6   A0A151XBF6   D3TRV3   A0A1B0DBV6   A0A1A9W6M0   A0A154P3Q5   A0A1A9UZU2   A0A1J1IJS1   A0A1B0CEL5   A0A088A397   E0VG46   A0A310SM53   A0A2M4A2N6   A0A0M9A3M3   A0A0J7KCE3   A0A2M4A2T6   A0A1L8DHT8   A0A2M4A2T8   A0A1L8DHP6   A0A2R5LLG9   A0A1Z5LHE0   A0A0L7QXR4   A0A293M0N5  

EC Number

7.6.2.1

Pubmed

19121390    28134300    21452889    22118469    23622113    26354079    + More
18362917    19820115    24945155    26483478    25348373    17510324    17994087    25244985    25315136    24495485    20966253    12364791    14747013    17210077    24438588    25830018    22651552    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    21282665    22516182    26108605    15632085    24508170    30249741    20798317    21347285    21719571    28004739    20075255    20920257    23761445    26369729    20353571    20566863    28528879   

EMBL

BABH01021731    KU955848    AQM56845.1    NWSH01000825    PCG74002.1    JF417988    + More
AEB26319.1    AGBW02003976    OWR55478.1    GAIX01004436    JAA88124.1    KQ460949    KPJ10467.1    KQ459185    KPJ03225.1    ODYU01009243    SOQ53521.1    KQ971354    EFA06843.2    GALX01004161    JAB64305.1    GAPW01001072    JAC12526.1    JXUM01102363    JXUM01102364    KQ564722    KXJ71837.1    GAKP01010342    JAC48610.1    CH477324    EAT43532.1    GDHF01029084    GDHF01027393    JAI23230.1    JAI24921.1    CH902620    EDV31750.1    CH940649    EDW63852.1    KA645808    AFP60437.1    GAMC01002287    JAC04269.1    AXCM01001957    UFQS01000042    UFQT01000042    SSW98339.1    SSX18725.1    AAAB01008964    EAA12316.2    ATLV01020383    KE525299    KFB45238.1    GBXI01015136    JAC99155.1    GFDL01003007    JAV32038.1    AK404873    BAM20344.1    CP012523    ALC38608.1    APGK01025879    APGK01025880    KB740605    KB632095    ENN80031.1    ERL88766.1    CH954177    EDV57573.1    AE014134    BT016042    AAF51155.1    AAV36927.1    AGB92519.1    CM002910    KMY87813.1    CM000157    EDW87487.1    CH933807    EDW11353.1    CH963857    EDW75890.1    GL765434    EFZ16282.1    AXCN02000788    BT127419    AEE62381.1    CH480820    EDW54094.1    JRES01000145    KNC33840.1    GANO01002201    JAB57670.1    NEVH01013208    PNF29805.1    CH379060    EAL33893.1    CH479180    EDW29188.1    GGFJ01004562    MBW53703.1    KK107139    QOIP01000003    EZA57738.1    RLU24398.1    KQ980404    KYN16205.1    GL446009    EFN88588.1    ADTU01005029    GL888175    EGI66063.1    CH916368    EDW03739.1    OUUW01000004    SPP79553.1    GEZM01021571    JAV88934.1    GGFM01002605    MBW23356.1    KQ977580    KYN01753.1    AAZX01002214    GBYB01009216    JAG78983.1    ADMH02001927    ETN60474.1    KQ976440    KYM86501.1    KQ981856    KYN34637.1    GDAI01001343    JAI16260.1    CCAG010008016    GL438820    EFN68386.1    KQ982330    KYQ57669.1    EZ424155    ADD20431.1    AJVK01030298    AJVK01030299    KQ434809    KZC06452.1    CVRI01000054    CRL00493.1    AJWK01008993    DS235131    EEB12352.1    KQ761039    OAD58375.1    GGFK01001736    MBW35057.1    KQ435767    KOX75283.1    LBMM01009749    KMQ87899.1    GGFK01001758    MBW35079.1    GFDF01008103    JAV05981.1    GGFK01001740    MBW35061.1    GFDF01008102    JAV05982.1    GGLE01006205    MBY10331.1    GFJQ02000171    JAW06799.1    KQ414704    KOC63341.1    GFWV01008912    MAA33641.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000007266    + More
UP000069940    UP000249989    UP000008820    UP000007801    UP000008792    UP000095300    UP000076408    UP000095301    UP000075920    UP000075883    UP000075882    UP000075885    UP000075902    UP000076407    UP000007062    UP000030765    UP000075903    UP000075900    UP000075880    UP000092553    UP000019118    UP000030742    UP000075881    UP000008711    UP000000803    UP000002282    UP000009192    UP000007798    UP000192223    UP000075886    UP000001292    UP000075884    UP000037069    UP000235965    UP000001819    UP000008744    UP000053097    UP000279307    UP000078492    UP000008237    UP000005205    UP000007755    UP000192221    UP000001070    UP000268350    UP000078542    UP000002358    UP000000673    UP000078540    UP000078541    UP000092444    UP000000311    UP000069272    UP000075809    UP000092462    UP000091820    UP000076502    UP000078200    UP000183832    UP000092461    UP000005203    UP000009046    UP000053105    UP000036403    UP000053825   

PRIDE

H9J390    Q9VQL1   

Pfam

PF00587   tRNA-synt_2b        + More
PF02403   Seryl_tRNA_N
PF16212   PhoLip_ATPase_C
PF16209   PhoLip_ATPase_N
PF00096   zf-C2H2
PF05485   THAP

Interpro

IPR002314   aa-tRNA-synt_IIb        + More
IPR033729   SerRS_core       
IPR010978   tRNA-bd_arm       
IPR015866   Ser-tRNA-synth_1_N       
IPR042103   SerRS_1_N_sf       
IPR002317   Ser-tRNA-ligase_type_1       
IPR006195   aa-tRNA-synth_II       
IPR030355   ATP9B       
IPR032630   P_typ_ATPase_c       
IPR018303   ATPase_P-typ_P_site       
IPR032631   P-type_ATPase_N       
IPR036412   HAD-like_sf       
IPR023214   HAD_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR001757   P_typ_ATPase       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR006539   P-type_ATPase_IV       
IPR038441   THAP_Znf_sf       
IPR006612   THAP_Znf       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF46589   SSF46589        + More
SSF81660   SSF81660       
SSF81665   SSF81665       
SSF81653   SSF81653       
SSF56784   SSF56784       
SSF57667   SSF57667       

Gene 3D

1.10.287.40     3.40.1110.10     3.40.50.1000     3.30.40.180    

CDD

cd00770  SerRS_core

ProteinModelPortal

H9J390   A0A1Q1NKM3   A0A2A4JRF4   F5BYI3   A0A212FP04   S4PBU6   + More
A0A194QYC5   A0A194QE52   A0A2H1WKB7   D6WPN5   V5G2R2   A0A023EUD5   A0A182H102   A0A034W3A2   Q17BB4   A0A0K8UEC4   B3MLK1   B4LT21   A0A1I8NUR4   A0A182Y3H4   T1PCX4   W8C4I5   A0A1Y9IVD4   A0A182MGD1   A0A336K0V3   A0A182L0Y8   A0A182PCN7   A0A182U5J4   A0A182XL45   Q7Q472   A0A084W4U4   A0A0A1WKE4   A0A182UVZ2   A0A1Q3FWW8   I4DR04   A0A182R300   A0A182JCI2   A0A0M4E484   N6UHC9   A0A182JY99   B3NAQ0   Q9VQL1   A0A0J9QUR7   B4NXD0   B4KIL0   B4MW20   E9IT38   A0A1W4X9B1   A0A182QZF7   J3JW01   B4I2U9   A0A182MYY5   A0A0L0CNE4   U5EUR8   A0A2J7QMI2   Q29M02   B4G6Y9   A0A2M4BL64   A0A026WP56   A0A151J2G2   E2B6U7   A0A158NZV6   F4WID2   A0A1W4V624   B4JA65   A0A3B0JFT2   A0A1Y1MTB5   A0A2M3Z4B5   A0A195CM19   K7J967   A0A0C9RPV5   W5JCC0   A0A195BMI9   A0A195F380   A0A0K8TQS8   A0A1B0FRC0   E2ADM4   A0A182F4A6   A0A151XBF6   D3TRV3   A0A1B0DBV6   A0A1A9W6M0   A0A154P3Q5   A0A1A9UZU2   A0A1J1IJS1   A0A1B0CEL5   A0A088A397   E0VG46   A0A310SM53   A0A2M4A2N6   A0A0M9A3M3   A0A0J7KCE3   A0A2M4A2T6   A0A1L8DHT8   A0A2M4A2T8   A0A1L8DHP6   A0A2R5LLG9   A0A1Z5LHE0   A0A0L7QXR4   A0A293M0N5  

PDB

4L87     E-value=0,     Score=1747

KEGG

101743384    K01875 seryl-tRNA synthetase [EC:6.1.1.11] | (RefSeq) serine--tRNA ligase, cytoplasmic

PATHWAY

00970    Aminoacyl-tRNA biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0004828   GO:0006434   GO:0005737   GO:0005802   GO:0000287   GO:0016021   GO:0004012   GO:0003677   GO:0000166   GO:0004812   GO:0006418   GO:0043564   GO:0003824  

PANTHER

PTHR11778   PTHR24092:SF50   PTHR24092  

Subcellular location

Membrane  

Length:

494

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0167

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00113

outside

1  -  494

 

 

Pi

134.16033

Theta

142.412144

Tajima's D

-0.698039

CLR

0.192121

CSRT

0.195740212989351

Interpretation

Uncertain