Gene

KWMTBOMO11674

Pre Gene Modal

BGIBMGA003980

Annotation

PREDICTED:_GTP-binding_protein_Rit2?_partial_[Papilio_polytes]

Location

Bomo_Chr19(-):11114305-11119112      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.396 Mitochondrial   Reliability : 1.304 Nuclear   Reliability : 1.079

CDS

ATGGCGGGCGAGGCTGCGGGCACGTCGCGAGGGTTGCGCGTATACAAGATCGTGGTACTGGGCGACGGCGGGGTCGGCAAGTCTGCGGTCACACTCCAGTTCGTCAGCCACAGTTTTTTGGACTACCATGACCCAACCATAGAGGACTCCTATCAACAACAAGCAGTAATTGATGGAGAACCAGCACTGCTGGACATTCTGGATACAGCTGGTCAGGTGGAGTTCACTGCGATGCGGGAGCAGTACATGCGTTGCGGGGAAGGCTTTGTGCTGTGCTACTCGGTGACGGACCGGCGATCGTTCCGCGCTGCCGCCGAGTACAGGAGGCTGCTGGCGCAGGCGCGTCCCTCCGAGAGGCTCCCACTCGTGCTGGTTGGAAACAAACTTGACCTAGCTCCGAGACTTAGACAGGTAACGACCGAGGAAGGCAAGGAGCTGGCCACACAGCTGGGGTGTCCGTTCTACGAGACTTCGGCGGCGCTAAGGCACTTCGTCGATGACGCATTCCACGCACTCGTCCGAGAGATACGGCGCCTAGAGAGACAGAGACAGAAAAACTATCATAACAAAAGAGATATTTGA

Protein

MAGEAAGTSRGLRVYKIVVLGDGGVGKSAVTLQFVSHSFLDYHDPTIEDSYQQQAVIDGEPALLDILDTAGQVEFTAMREQYMRCGEGFVLCYSVTDRRSFRAAAEYRRLLAQARPSERLPLVLVGNKLDLAPRLRQVTTEEGKELATQLGCPFYETSAALRHFVDDAFHALVREIRRLERQRQKNYHNKRDI

Uniprot

A0A194QYD0   A0A194QIF5   A0A2H1WUQ0   A0A2A4JPR2   A0A212FP27   A0A212FAS3   + More
A0A182QIY1   A0A182MV23   A0A2Y9D0Y8   A0A182UWY0   A0A182TXD8   A0A182LBH2   Q7Q9M1   Q16WL0   A0A1S4FLW5   A0A2M4AX49   W5JRD3   A0A182FED7   A0A182IL66   A0A1W4WJF0   A0A154P2J3   A0A084W2E6   B0X442   A0A0M9A0C0   Q28WT4   B4H6A6   A0A0M4EUV1   A0A0Q9WWT8   A0A1Y1M7R4   A0A088ALI8   A0A182XJC9   D6WSK4   A0A0L7QRQ4   A0A182R3D2   A0A3B0J020   B4KQB0   A0A1W4UZR2   A0A182N857   B3MF50   B4LL57   B4J9Y2   A0A182WAE2   B4P6R4   B3NPX5   E9JAW2   H9J393   A0A336MUA4   Q7JMZ0   B4HSJ7   B4QHF1   A0A1B0CCY4   E2BBL8   A0A023GIU9   A0A1J1JAH2   A0A0L0CB96   E2AT49   T1PID6   K7J0D5   A0A026W802   A0A232FLD9   F4WHH5   A0A151WNM9   A0A3L8DTI3   A0A195FTZ3   A0A182YIH8   A0A151J7Q3   A0A2J7Q6A4   A0A195BUW7   A0A158N926   A0A0A1XBH7   A0A034VNN2   A0A0A1X7F4   A0A0P4WE30   A0A0P4WKH4   A0A067QYA8   A0A0K8UW67   W8B4B5   A0A1I8NRK7   A0A182PCB9   A0A1E1X3C1   A0A1E1XTE3   A0A293N2T1   G3MLW8   A0A224YZJ1   A0A131YH10   L7M7Q2   V5I4R3   A0A131XC14   A0A2R5LJJ7   L7LTJ3   Q16EF0   A0A2M4C168   A0A182SAP5   T1IWJ0   A0A2B4S198   E0VQH6   E5L9R9   A0A3M6T989   A0A2P2I560   G1KPH1  

Pubmed

26354079    22118469    20966253    12364791    14747013    17210077    + More
17510324    20920257    23761445    24438588    15632085    17994087    28004739    18362917    19820115    17550304    21282665    19121390    8918462    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    20798317    26108605    25315136    20075255    24508170    28648823    21719571    30249741    25244985    21347285    25830018    25348373    24845553    24495485    28503490    29209593    22216098    28797301    26830274    25576852    25765539    28049606    20566863    20978910    30382153   

EMBL

KQ460949    KPJ10472.1    KQ459185    KPJ03231.1    ODYU01011205    SOQ56791.1    + More
NWSH01000825    PCG73991.1    AGBW02003976    OWR55485.1    AGBW02009432    OWR50830.1    AXCN02001001    AXCM01003731    APCN01002896    AAAB01008900    EAA09461.4    CH477562    EAT38979.1    GGFK01012043    MBW45364.1    ADMH02000689    ETN65309.1    KQ434807    KZC06159.1    ATLV01019609    KE525275    KFB44390.1    DS232328    EDS40119.1    KQ435794    KOX73746.1    CM000071    EAL26582.1    CH479213    EDW33330.1    CP012524    ALC41295.1    CH964282    KRG00245.1    GEZM01042297    JAV79956.1    KQ971354    EFA05904.1    KQ414775    KOC61308.1    OUUW01000001    SPP73955.1    CH933808    EDW09238.1    CH902619    EDV37678.1    CH940648    EDW61864.2    CH916367    EDW02569.1    CM000158    EDW91991.1    CH954179    EDV55822.1    GL770679    EFZ10020.1    BABH01021727    BABH01021728    UFQS01002634    UFQT01002634    SSX14416.1    SSX33826.1    AE013599    Y07564    AAF58065.1    ACZ94437.1    CAA68849.1    CH480816    EDW48075.1    CM000362    CM002911    EDX07296.1    KMY94159.1    AJWK01007219    GL447128    EFN86895.1    GBBM01002718    JAC32700.1    CVRI01000075    CRL08558.1    JRES01000655    KNC29507.1    GL442495    EFN63389.1    KA648562    AFP63191.1    KK107372    EZA51776.1    NNAY01000081    OXU31157.1    GL888161    EGI66329.1    KQ982907    KYQ49474.1    QOIP01000004    RLU23694.1    KQ981268    KYN43928.1    KQ979640    KYN20039.1    NEVH01017534    PNF24111.1    KQ976405    KYM91875.1    ADTU01009051    GBXI01017119    GBXI01006000    JAC97172.1    JAD08292.1    GAKP01015794    GAKP01015792    GAKP01015789    JAC43158.1    GBXI01007679    JAD06613.1    GDRN01065397    JAI64692.1    GDRN01065398    JAI64691.1    KK853111    KDR11212.1    GDHF01021385    JAI30929.1    GAMC01013133    JAB93422.1    GFAC01005444    JAT93744.1    GFAA01001155    JAU02280.1    GFWV01022369    MAA47096.1    JO842869    AEO34486.1    GFPF01011209    MAA22355.1    GEDV01010028    JAP78529.1    GACK01005851    JAA59183.1    GANP01001040    JAB83428.1    GEFH01004946    JAP63635.1    GGLE01005596    MBY09722.1    GACK01010107    JAA54927.1    CH478791    EAT32608.1    GGFJ01009597    MBW58738.1    JH431620    LSMT01000235    PFX22570.1    DS235430    EEB15632.1    HQ384050    ADQ64543.1    RCHS01004063    RMX37976.1    IACF01003521    LAB69135.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000075886    UP000075883    + More
UP000075840    UP000075903    UP000075902    UP000075882    UP000007062    UP000008820    UP000000673    UP000069272    UP000075880    UP000192223    UP000076502    UP000030765    UP000002320    UP000053105    UP000001819    UP000008744    UP000092553    UP000007798    UP000005203    UP000076407    UP000007266    UP000053825    UP000075900    UP000268350    UP000009192    UP000192221    UP000075884    UP000007801    UP000008792    UP000001070    UP000075920    UP000002282    UP000008711    UP000005204    UP000000803    UP000001292    UP000000304    UP000092461    UP000008237    UP000183832    UP000037069    UP000000311    UP000095301    UP000002358    UP000053097    UP000215335    UP000007755    UP000075809    UP000279307    UP000078541    UP000076408    UP000078492    UP000235965    UP000078540    UP000005205    UP000027135    UP000095300    UP000075885    UP000075901    UP000225706    UP000009046    UP000275408    UP000001646   

PRIDE

H9J393    Q7JMZ0   

Pfam

PF00071   Ras        + More
PF00962   A_deaminase

Interpro

IPR027417   P-loop_NTPase        + More
IPR020849   Small_GTPase_Ras-type       
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       
IPR001365   A/AMP_deaminase_dom       
IPR032466   Metal_Hydrolase       

SUPFAM

SSF52540   SSF52540        + More
SSF51556   SSF51556       

ProteinModelPortal

A0A194QYD0   A0A194QIF5   A0A2H1WUQ0   A0A2A4JPR2   A0A212FP27   A0A212FAS3   + More
A0A182QIY1   A0A182MV23   A0A2Y9D0Y8   A0A182UWY0   A0A182TXD8   A0A182LBH2   Q7Q9M1   Q16WL0   A0A1S4FLW5   A0A2M4AX49   W5JRD3   A0A182FED7   A0A182IL66   A0A1W4WJF0   A0A154P2J3   A0A084W2E6   B0X442   A0A0M9A0C0   Q28WT4   B4H6A6   A0A0M4EUV1   A0A0Q9WWT8   A0A1Y1M7R4   A0A088ALI8   A0A182XJC9   D6WSK4   A0A0L7QRQ4   A0A182R3D2   A0A3B0J020   B4KQB0   A0A1W4UZR2   A0A182N857   B3MF50   B4LL57   B4J9Y2   A0A182WAE2   B4P6R4   B3NPX5   E9JAW2   H9J393   A0A336MUA4   Q7JMZ0   B4HSJ7   B4QHF1   A0A1B0CCY4   E2BBL8   A0A023GIU9   A0A1J1JAH2   A0A0L0CB96   E2AT49   T1PID6   K7J0D5   A0A026W802   A0A232FLD9   F4WHH5   A0A151WNM9   A0A3L8DTI3   A0A195FTZ3   A0A182YIH8   A0A151J7Q3   A0A2J7Q6A4   A0A195BUW7   A0A158N926   A0A0A1XBH7   A0A034VNN2   A0A0A1X7F4   A0A0P4WE30   A0A0P4WKH4   A0A067QYA8   A0A0K8UW67   W8B4B5   A0A1I8NRK7   A0A182PCB9   A0A1E1X3C1   A0A1E1XTE3   A0A293N2T1   G3MLW8   A0A224YZJ1   A0A131YH10   L7M7Q2   V5I4R3   A0A131XC14   A0A2R5LJJ7   L7LTJ3   Q16EF0   A0A2M4C168   A0A182SAP5   T1IWJ0   A0A2B4S198   E0VQH6   E5L9R9   A0A3M6T989   A0A2P2I560   G1KPH1  

PDB

4KLZ     E-value=1.19069e-56,     Score=552

KEGG

101739347    no KO assigned | (RefSeq) GTP-binding protein Rit2

GO

GO:0007165   GO:0003924   GO:0016020   GO:0005525   GO:0016021   GO:0009408   GO:0006970   GO:0006979   GO:0042594   GO:0005516   GO:0019239   GO:0007265   GO:0005886   GO:0019003   GO:0004767   GO:0045944   GO:0030215   GO:0003682   GO:0044297   GO:0010977   GO:0010976   GO:0097447   GO:0032507   GO:0045121   GO:0032489   GO:0005634   GO:0005737   GO:0030100   GO:0007264   GO:0006468   GO:0006811   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR24070  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13742

Exp number, first 60 AAs:

0.13684

Total prob of N-in:

0.16506

outside

1  -  193

 

 

Pi

231.28582

Theta

227.290535

Tajima's D

1.0477

CLR

0

CSRT

0.673116344182791

Interpretation

Uncertain