Silkworm Genome Informatics Database

Gene

KWMTBOMO11664

Pre Gene Modal

BGIBMGA004131

Annotation

PREDICTED:_uncharacterized_protein_LOC105842357_[Bombyx_mori]

Location

Bomo_Chr19(+):10967183-10978634 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.897

CDS

ATGCTGCCTTCTATGCCAGTTCTCTTCACCAGGGATAGTCAGGATGCATTTGGCAATAAAATTCAGCCAAGCACAAGCTTTTTTAATCAGAATTCTAATGACAAATCCTCATTTATTATAAAGCCGTCACCTACGACAGCTGTGCAAGACGAACCCAAAGTGACAAATGAGACTAAACACAAAAAGGAAATCCCTCAAAAACAGAAACCAGAGCCACCTAAGAAAGATTACAATGCATTTGAAACAGCGCTGATAAGATCTTACTACACAAAAGTACAATCAAGGTTTTCATCAAACATATCAATGCCTAAGAACAAATTTGTACAATTTCAAAACACATTAAAAACATTTGACCCTAATAAAGAGACTCCAGTAGATTTATTTAGAAAAATAGAACAATTATTTGGTGAAGAACACAAGGATATAGTTGAGGATTTTTTACTGTTTTTAAAGCCGGGACAGGCAGCTGAGGTTGGGAGGTTCATGGACCGGTTCATGCTTGTACGAATAACAGCTTTCATTGAGTCTTTACAAAACGCTTTCGCTCGCAAGCCCACTGTGCTTCGTAAAGTGATCCGCGCCATCACGACGGGCCTCAATTCTGGGAACAGCGAGGACACGAAGGCCCGGGTACTGCCGCATCTGAGATCACACGCGCGCTTAACGCAAATGTTCAAATCTCTGTTCCCTGATGAGAGACCATCGGACAGCTTGTATGAGACCGGCACTGATTGTATAGACGAAAGCTTCCTGACGAAGGACACCGGCTGCGACGTTTGGGAGTTTGTTGAGCCAAACGATAACAGACAGAAGCCAGACTACAAGAAAGGTCTCGATACTGCGTATCTGAACGGTCGCGTGTTCCTACAGCACGGCCGCCTGCTGCGGTCGGCGCGGGTCACCTACCCGTACAGCAAGGAGCCCTACCGGGTGCACGCGCGCCGCCTCGCGCCCGCGCAGTGCCACCTCTCCCCGCCGGACTCCGACGAGGAGCGGTCTTCGCCCAAGCGAAACGCGAAAACTCCTTCGAAGATCGCCCCGAAACGTCCCAAGAAACAACTCAAATCGCCAACGAAAAACGTAAAAGACGTAAACGACAACACAAAGCACAAAGACTGCTCCATTCTGAGCCCTAAAGCGAAGAAACAACAGAACGTCAAGCCCAAAAGCAAAGAGGTCGTCAAACGGAAAGACTCAAAAGGCTTAATATGTAAAAACGAAGGTTCTAGAACAAAACAAACAAAGATTGAAAGCGTTGCGAGTGCGGACGCTAAGAAAGCCGAGATCAAGAGTAATTGGACTCGCGACGAGGACAAGACGATGCTGCAGGTTCTGAAAGGGGAGGCCGGCTCCGAGCAGGTGTTCCGCCGCATCCGGCAGCTTCTGCCGCACCGGTCGCCCGCCGAGATCAAGGAGCGCTTCTGTCACGTCATGAAGCTGTTACAGCAAATGTCGGTCGGCGAGGTTACTTAG

Protein

MLPSMPVLFTRDSQDAFGNKIQPSTSFFNQNSNDKSSFIIKPSPTTAVQDEPKVTNETKHKKEIPQKQKPEPPKKDYNAFETALIRSYYTKVQSRFSSNISMPKNKFVQFQNTLKTFDPNKETPVDLFRKIEQLFGEEHKDIVEDFLLFLKPGQAAEVGRFMDRFMLVRITAFIESLQNAFARKPTVLRKVIRAITTGLNSGNSEDTKARVLPHLRSHARLTQMFKSLFPDERPSDSLYETGTDCIDESFLTKDTGCDVWEFVEPNDNRQKPDYKKGLDTAYLNGRVFLQHGRLLRSARVTYPYSKEPYRVHARRLAPAQCHLSPPDSDEERSSPKRNAKTPSKIAPKRPKKQLKSPTKNVKDVNDNTKHKDCSILSPKAKKQQNVKPKSKEVVKRKDSKGLICKNEGSRTKQTKIESVASADAKKAEIKSNWTRDEDKTMLQVLKGEAGSEQVFRRIRQLLPHRSPAEIKERFCHVMKLLQQMSVGEVT

Uniprot

H9J3P4 A0A2A4JT54 A0A2H1W9R3 A0A194R3Q7 A0A194QCP2 A0A212FBK9 + More
S4NXK2 A0A0T6B401 A0A088ATD4 E2BPT2 A0A0C9QDZ6

Pubmed

19121390 26354079 22118469 23622113 20798317

EMBL

BABH01021715 BABH01021716 BABH01021717 NWSH01000623 PCG75191.1 ODYU01007210 + More
SOQ49787.1 KQ460949 KPJ10476.1 KQ459185 KPJ03237.1 AGBW02009302 OWR51120.1 GAIX01012127 JAA80433.1 LJIG01009906 KRT82144.1 GL449658 EFN82283.1 GBYB01012638 JAG82405.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151 UP000005203 + More
UP000008237

PRIDE

H9J3P4

Pfam

PF00249 Myb_DNA-binding

Interpro

IPR003822   PAH        + More
IPR009057   Homeobox-like_sf
IPR036600   PAH_sf
IPR001005   SANT/Myb
IPR017877   Myb-like_dom

SUPFAM

SSF46689 SSF46689 + More
SSF47762 SSF47762

CDD

cd00167 SANT

ProteinModelPortal

H9J3P4 A0A2A4JT54 A0A2H1W9R3 A0A194R3Q7 A0A194QCP2 A0A212FBK9 + More
S4NXK2 A0A0T6B401 A0A088ATD4 E2BPT2 A0A0C9QDZ6

KEGG

105842357 no KO assigned | (RefSeq) uncharacterized LOC105842357

GO

GO:0005634 GO:0006355 GO:0003677 GO:0042246 GO:0008152 GO:0005216 GO:0006811 GO:0016020 GO:0043564 GO:0006418 GO:0003824

Subcellular location

Nucleus

Length:

490

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00199

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00027

outside

1 - 490

Pi

238.299254

Theta

168.160003

Tajima's D

0.85567

CLR

0.158068

CSRT

0.616969151542423

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics