SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11662  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003987
Annotation
PREDICTED:_dihydropteridine_reductase_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 1.182
 

Sequence

CDS
ATGGCTACCGGTAGAATCGTCGTGTACGGTGGTCGTGGGGCATTGGGTGCTGCCTGCGTGAACCATTTTAAATCTTTTAATTATTGGGTCGCTAACATTGATTTGAATCCCAACGAAAAAGCCGATTTTAACATTACTGTCCCCAAAGACGCTTCATGGGTTGAACAGGAAGATCATGTCGTGAACGAGCTTGGAAACGCCCTACAAGGTCAGAAAGTGAATGCTATTATATGCGTTGCGGGTGGCTGGGCTGGCGGAAACGCCGCTAAGGACCTCAGCAAGCAGGCGGACTTGATGTGGCGTCAATCAGTGTGGAGTTCCTCTATTGCAGCAACATTGGCAGCTAAGTACTTAAACACTGGTGGTTTGTTGGCTTTAACTGGGGCAAAAGCAGCCTTAGAAGCCACCCCAGGAATGATCGGCTATGGAATGGCAAAGGCCGCTGTACACCAACTCACAAAATCTCTGGGTGCTAAGGACTCTGGTCTGCCAGAGAATTCATTAGCTGTAGCTATAATGCCTGTTACATTGGATACAGAAATGAACAGAAAATGGATGCCAAAAGCGGACTTCAGTACATGGACTCCGCTGACCTTTGTGGCTGAGTTATTTGAAAAGTGGATGAAGGATGAAGGCCGTCCAGCGAATGGCAGCTTAGTTGCCCTTGTCACCAAAAATAATGTTACTGACTTAATTATTGAGTAA
Protein
MATGRIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNELGNALQGQKVNAIICVAGGWAGGNAAKDLSKQADLMWRQSVWSSSIAATLAAKYLNTGGLLALTGAKAALEATPGMIGYGMAKAAVHQLTKSLGAKDSGLPENSLAVAIMPVTLDTEMNRKWMPKADFSTWTPLTFVAELFEKWMKDEGRPANGSLVALVTKNNVTDLIIE

Summary

EMBL
BABH01021713    NWSH01000623    PCG75194.1    ODYU01007210    SOQ49790.1    GDQN01002716    + More
GDQN01002066    JAT88338.1    JAT88988.1    KQ460949    KPJ10479.1    KQ459336    KQ459185    KPJ01434.1    KPJ03239.1    AK404929    BAM20380.1    AK401217    BAM17839.1    RSAL01000136    RVE46243.1    JTDY01000145    KOB78605.1    AGBW02009302    OWR51122.1    CH964168    EDW80136.1    CH933816    EDW17319.1    CH902618    EDV41117.1    JRES01000341    KNC32099.1    CM002912    KMY98562.1    CH480815    EDW40815.1    AE014296    AF172147    AY113502    AAF50315.1    AAF80857.1    AAM29507.1    AAX52750.1    AAX52751.1    CM000159    EDW93069.1    DQ440388    CH477408    ABF18421.1    EAT41525.1    CP012525    ALC44491.1    CH940647    EDW68643.1    CH954178    EDV50585.1    EAT41526.1    UFQT01000194    SSX21468.1    UFQS01000732    UFQT01000732    SSX06438.1    SSX26787.1    JXUM01044655    KQ561409    KXJ78672.1    JXJN01010282    GBXI01003841    JAD10451.1    CCAG010023354    EZ422629    ADD18905.1    SSX21466.1    GAMC01002040    JAC04516.1    CH916366    EDV95827.1    AXCM01004545    AXCN02000007    CH379068    EAL31221.1    CH479246    EDW37795.1    GAKP01010417    GAKP01010415    GAKP01010412    JAC48540.1    GGFM01007931    MBW28682.1    GAKP01010413    GAKP01010410    JAC48542.1    GGFL01004292    MBW68470.1    ATLV01018208    KE525224    KFB42803.1    AAAB01008859    EAA07501.3    APCN01000336    GFDL01014380    JAV20665.1    DS233329    EDS29439.1    GAMD01003151    JAA98439.1    GGFM01007843    MBW28594.1    GGFK01009605    MBW42926.1    GGFJ01008962    MBW58103.1    GGFK01009604    MBW42925.1    GBYB01006557    JAG76324.1    GDHF01024223    GDHF01001854    JAI28091.1    JAI50460.1    ADMH02002105    ETN58999.1    OUUW01000009    SPP85387.1    EGK96866.1    GGFJ01008981    MBW58122.1    GALA01001479    JAA93373.1    GANO01002428    JAB57443.1    NWSH01001921    PCG69673.1    APGK01038951    KB740966    ENN76900.1    BT127406    KB632286    AEE62368.1    ERL91411.1    AJVK01029796    NEVH01011876    PNF31514.1    KK853313    KDR08654.1    AJWK01007160    CVRI01000047    CRK97204.1    KB200702    ESP00439.1    GFDF01001207    JAV12877.1    GALX01000654    JAB67812.1    GBYB01006675    JAG76442.1    HACG01005633    CEK52498.1    CCAG010011595    PCG75193.1    JXJN01002558    GECZ01025807    JAS43962.1    SSX21467.1   
Pfam
PF00106   adh_short
Interpro
IPR020904   Sc_DH/Rdtase_CS        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR002347   SDR_fam       
SUPFAM
SSF51735   SSF51735       
PDB
1HDR     E-value=1.20412e-61,     Score=597

Ontologies

Topology

Length:
234
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.772729999999998
Exp number, first 60 AAs:
0.08544
Total prob of N-in:
0.10167
outside
1  -  234
 
 

Population Genetic Test Statistics

Pi
193.339851
Theta
207.17828
Tajima's D
-0.304471
CLR
9.320308
CSRT
0.287685615719214
Interpretation
Uncertain
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