Gene

KWMTBOMO11659

Pre Gene Modal

BGIBMGA004130

Annotation

Malate_dehydrogenase_[Papilio_xuthus]

Location

Bomo_Chr19(+):10838088-10848205      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.294

CDS

ATGCCTGAGGTACTAGTTGAGGAAGCCAGGCGGTTCATGGAGGACAGCCTCACGGCTGTAGGCGCTCCTGTATCCGAAGCGAAAGCGCAAGCTGATCTTCTAATCCATGCTGATACAGTCGGACATTACAGTCACGGACTTAACAGATTGGAATTCTATATAAACGATATCCTGTCAAAAGCAACAGATCCTTGTGCAAAGCCGGTGATATTGAAAGAGTCGGCTGCGACCGCTCTGGTGGACGGTTGCGACGCTTTAGGTGCTACTGTCGGAAACTTCTGTATGGAAGTCGCGATCAGGAAGGCGAAGGAAGCGGGAGTAGGATGGGTGGCTGCCAGACGTAGCAATCATTACGGTATGGCTGGATACTGGGCATTGAAGGCGGAAAAACAGGGTCTCATAGGACTGTCGTTTACAAATTCTTCCCCGATATTAGTACCGACTAGATCTAAAACAAGTGCATTGGGTACAAATCCCATAGCTTTGGCCGCTCCAGCTAAAGACGGCGATAATTTGGTTGTAGATTTAGCTACAACGGCTGTTGCTATGGGCAAAGTTGAAATACAAGTACACAAAGAGGAGCCATTGCCAGCTGGCTGGGCGCTCGGCCCCGATGGAAAAACTACCACTGATGCTAAATTGGCTTTCGAAACAGCTAAACTCCTGCCGCTGGGAGGTGCTGAAGAGACCAGTGGTTACAAAGGGTATGCTTTGAGCGCCCTTGTTGAAGTATTGTGCAGTGGATTATCGGGATCTAAATCGACGCATCAAGTCCGTGGTTGGGAACTGGACAGTCAAGGCGGACCTCCGGATCTGGGGCACTGCTTCGCGGCCATCGACCCGGGCTGCTTCGCTCCTGGCTTCGAAGACAGGATCTCGAACTGCTTACAGCACTGGAGGAACTTAGAACCGATGGACCCTAAACTCCCCGTACTAGCACCAGGAGACAAAGAACGCAAGAACTACGCGGAAACACAGAAGAGAGGAACCATAAACTACCCTCAGAAACAGTACGAAGCTTACTTCAAAATGGCGAATCGAATCGGAATAAAACCAATGCAGATAGTGTGA

Protein

MPEVLVEEARRFMEDSLTAVGAPVSEAKAQADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALGATVGNFCMEVAIRKAKEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPTRSKTSALGTNPIALAAPAKDGDNLVVDLATTAVAMGKVEIQVHKEEPLPAGWALGPDGKTTTDAKLAFETAKLLPLGGAEETSGYKGYALSALVEVLCSGLSGSKSTHQVRGWELDSQGGPPDLGHCFAAIDPGCFAPGFEDRISNCLQHWRNLEPMDPKLPVLAPGDKERKNYAETQKRGTINYPQKQYEAYFKMANRIGIKPMQIV

Uniprot

H9J3P3   A0A2H1VF87   A0A2H1VG35   A0A2A4JT31   A0A194QIG5   S4PYB2   + More
A0A212FNJ9   A0A3S2NAY3   A0A194QCP7   A0A212FNQ3   A0A2H1VFV1   A0A1B6MIR7   A0A194QYE0   A0A084WMQ8   T1E821   A0A2A4JTQ6   W5JGY0   A0A182J993   A0A182TC41   A0A2M4A9B8   A0A2M4A8Y9   A0A3F2Z255   A0A2M4A993   Q7PI68   A0A2M4BMC1   A0A2M3Z812   A0A3F2YSU0   A0A2M4BLN2   A0A182UET8   A0A182KC31   A0A182MF34   A0A3F2YUT7   A0A182PDI9   A0A3F2Z243   A0A182V6K4   A7UUE0   A0A182QHD3   A0A3F2YSU4   A0A182NIS9   A0A1Q3FLN1   A0A182Y2M5   A0A2J7REG8   B0XBA9   A0A2J7REG9   B4LHA3   A0A1Y1NQ32   B4K0I1   A0A0Q9WLQ0   A0A0Q9WS29   B4J137   A0A182GX03   A0A2A4JUX8   A0A194R3R2   A0A336KKY3   U5ET27   B4H5Y0   B4ML58   A0A336M4M8   A0A3B0KNF1   A0A2A4JUW3   Q8IPT9   A0A0Q9XME1   A0A3B0JTA1   A0A0M3QX38   B4KUL3   Q2LYQ7   Q8IPU0   B3NIW8   A0A1W4V9A7   A0A0J9RZA6   A0A182FEX8   Q9VP68   A0A182RDI2   A0A0J9S0M4   A0A1L8E132   B4ITH5   A0A0P8Y9U6   B4PE63   B5RIN9   A0A0K8TRR8   B4IAK9   B3M6T1   A0A1D2NDY4   Q961U7   A0A034VHT6   A0A182WBT0   A0A1L8E1J8   A0A034VM42   W8B513   A0A0K8UVR2   W8B112   A0A1J1IRZ0   A0A0A1XSQ8   A0A0A1WKR5   A0A0A1WH71   A0A3R7PNK7   A0A1B0ABA4   A0A1B6H9E9   W5LY39   W5LY58  

Pubmed

19121390    26354079    23622113    22118469    24438588    20920257    + More
23761445    12364791    14747013    17210077    20966253    25244985    17994087    28004739    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    22936249    17550304    26369729    27289101    25348373    24495485    25830018   

EMBL

BABH01021703    ODYU01002232    SOQ39441.1    ODYU01002355    SOQ39741.1    NWSH01000623    + More
PCG75197.1    KQ459185    KPJ03241.1    GAIX01003593    JAA88967.1    AGBW02005277    OWR55321.1    RSAL01000136    RVE46247.1    KPJ03242.1    OWR55320.1    SOQ39740.1    GEBQ01004139    JAT35838.1    KQ460949    KPJ10482.1    ATLV01024501    KE525352    KFB51502.1    GAMD01003123    JAA98467.1    PCG75199.1    ADMH02001558    ETN62069.1    GGFK01004075    MBW37396.1    GGFK01003936    MBW37257.1    GGFK01004053    MBW37374.1    AAAB01008960    EAA44260.4    GGFJ01004950    MBW54091.1    GGFM01003906    MBW24657.1    APCN01002308    GGFJ01004801    MBW53942.1    AXCM01005053    EDO63918.1    EDO63919.1    AXCN02000480    GFDL01006600    JAV28445.1    NEVH01004981    PNF39233.1    DS232623    EDS44201.1    PNF39234.1    CH940647    EDW70616.1    GEZM01000243    JAV98447.1    CH916456    EDV98661.1    KRF85014.1    KRF85015.1    CH916366    EDV96892.1    JXUM01020208    JXUM01020209    KQ560566    KXJ81871.1    PCG75202.1    KPJ10481.1    UFQS01000523    UFQT01000523    SSX04578.1    SSX24941.1    GANO01002123    JAB57748.1    CH479212    EDW33197.1    CH963847    EDW73116.2    SSX04577.1    SSX24940.1    OUUW01000009    SPP85348.1    PCG75200.1    AE014296    BT150433    AAN12159.1    AHL21637.1    CH933809    KRG06078.1    SPP85347.1    CP012525    ALC44997.1    ALC45189.1    EDW18241.1    CH379069    EAL29804.2    AAN12158.1    CH954178    EDV52614.1    CM002912    KMZ00944.1    AAF51687.1    KMZ00945.1    GFDF01001710    JAV12374.1    CH891699    EDW99688.1    CH902618    KPU78208.1    CM000159    EDW95076.1    BT044163    ACH92228.1    GDAI01001013    JAI16590.1    CH480826    EDW44322.1    EDV39767.1    LJIJ01000072    ODN03478.1    AY047551    AAK77283.1    GAKP01016086    JAC42866.1    GFDF01001709    JAV12375.1    GAKP01016087    JAC42865.1    GAMC01014377    GAMC01014375    JAB92178.1    GDHF01031803    GDHF01021560    JAI20511.1    JAI30754.1    GAMC01014378    GAMC01014376    JAB92177.1    CVRI01000058    CRL02920.1    GBXI01000704    JAD13588.1    GBXI01014658    JAC99633.1    GBXI01016549    JAC97742.1    QCYY01001490    ROT77718.1    GECU01036368    JAS71338.1    AHAT01008084    AHAT01008085   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000283053    UP000053240    + More
UP000030765    UP000000673    UP000075880    UP000075901    UP000076407    UP000007062    UP000075840    UP000075902    UP000075881    UP000075883    UP000075882    UP000075885    UP000075903    UP000075886    UP000075884    UP000076408    UP000235965    UP000002320    UP000008792    UP000001070    UP000069940    UP000249989    UP000008744    UP000007798    UP000268350    UP000000803    UP000009192    UP000092553    UP000001819    UP000008711    UP000192221    UP000069272    UP000075900    UP000002282    UP000007801    UP000001292    UP000094527    UP000075920    UP000183832    UP000283509    UP000092445    UP000018468   

PRIDE

H9J3P3    Q8IPT9    Q8IPU0    Q9VP68    B5RIN9    Q961U7    + More

Pfam

PF02615   Ldh_2        + More
PF03966   Trm112p
PF03388   Lectin_leg-like
PF00566   RabGAP-TBC
PF01556   DnaJ_C
PF00226   DnaJ

Interpro

IPR036111   Mal/L-sulfo/L-lacto_DH-like_sf        + More
IPR003767   Malate/L-lactate_DH-like       
IPR005651   Trm112-like       
IPR013320   ConA-like_dom_sf       
IPR005052   Lectin_leg       
IPR035969   Rab-GTPase_TBC_sf       
IPR000195   Rab-GTPase-TBC_dom       
IPR008971   HSP40/DnaJ_pept-bd       
IPR002939   DnaJ_C       
IPR036869   J_dom_sf       
IPR001623   DnaJ_domain       

SUPFAM

SSF89733   SSF89733        + More
SSF49899   SSF49899       
SSF47923   SSF47923       
SSF49493   SSF49493       
SSF46565   SSF46565       

Gene 3D

1.10.287.110    

CDD

cd06257  DnaJ

ProteinModelPortal

H9J3P3   A0A2H1VF87   A0A2H1VG35   A0A2A4JT31   A0A194QIG5   S4PYB2   + More
A0A212FNJ9   A0A3S2NAY3   A0A194QCP7   A0A212FNQ3   A0A2H1VFV1   A0A1B6MIR7   A0A194QYE0   A0A084WMQ8   T1E821   A0A2A4JTQ6   W5JGY0   A0A182J993   A0A182TC41   A0A2M4A9B8   A0A2M4A8Y9   A0A3F2Z255   A0A2M4A993   Q7PI68   A0A2M4BMC1   A0A2M3Z812   A0A3F2YSU0   A0A2M4BLN2   A0A182UET8   A0A182KC31   A0A182MF34   A0A3F2YUT7   A0A182PDI9   A0A3F2Z243   A0A182V6K4   A7UUE0   A0A182QHD3   A0A3F2YSU4   A0A182NIS9   A0A1Q3FLN1   A0A182Y2M5   A0A2J7REG8   B0XBA9   A0A2J7REG9   B4LHA3   A0A1Y1NQ32   B4K0I1   A0A0Q9WLQ0   A0A0Q9WS29   B4J137   A0A182GX03   A0A2A4JUX8   A0A194R3R2   A0A336KKY3   U5ET27   B4H5Y0   B4ML58   A0A336M4M8   A0A3B0KNF1   A0A2A4JUW3   Q8IPT9   A0A0Q9XME1   A0A3B0JTA1   A0A0M3QX38   B4KUL3   Q2LYQ7   Q8IPU0   B3NIW8   A0A1W4V9A7   A0A0J9RZA6   A0A182FEX8   Q9VP68   A0A182RDI2   A0A0J9S0M4   A0A1L8E132   B4ITH5   A0A0P8Y9U6   B4PE63   B5RIN9   A0A0K8TRR8   B4IAK9   B3M6T1   A0A1D2NDY4   Q961U7   A0A034VHT6   A0A182WBT0   A0A1L8E1J8   A0A034VM42   W8B513   A0A0K8UVR2   W8B112   A0A1J1IRZ0   A0A0A1XSQ8   A0A0A1WKR5   A0A0A1WH71   A0A3R7PNK7   A0A1B0ABA4   A0A1B6H9E9   W5LY39   W5LY58  

PDB

1V9N     E-value=8.54865e-50,     Score=497

KEGG

101742189    no KO assigned | (RefSeq) uncharacterized LOC101742189

GO

GO:0016491   GO:0016021   GO:0051082   GO:0006457   GO:0008152   GO:0004563   GO:0005216   GO:0006811   GO:0016020   GO:0043564   GO:0006418   GO:0003824   GO:0055114  

PANTHER

PTHR11091  

Length:

356

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00247

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00638

outside

1  -  356

 

 

Pi

199.889628

Theta

166.231859

Tajima's D

1.42352

CLR

0.776188

CSRT

0.762361881905905

Interpretation

Uncertain