SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11655  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003991
Annotation
PREDICTED:_bis(5'-nucleosyl)-tetraphosphatase_[asymmetrical]_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.718 Extracellular   Reliability : 1.782
 

Sequence

CDS
ATGTCTTCTTTAAGAGCCGCAGGTTTGGTTATTTTCAGAAATTATAATCAAATTATACAATTCCTATTACTGCAAACATCCTACGGAGAACATCATTGGACACCACCAAAAGGACATGTTGATCCTGGAGAAACTGATTGGATGACAGCTTTGAGAGAAACAAAAGAAGAAGCCGGTCTGTGCGAAGATCACTTAGATATTTACAAAGACATAAACAAAACTTTAAATTATGAAGTAAACGGAGAACCCAAAACTGTTGTGTACTGGTTGGCAAAGCTTAAAAATCCTGAACAGACAGTCACCCTTTCATCTGAACACCAAGATATGAAGTGGCTCTCATTGCAAGAAGCACAGGAAATATCAAAATACGAAGACATGAGACAATTGCTTGCGGAATTTTATGAGAAATGTAAAAGTAGATAA
Protein
MSSLRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKCKSR

Summary

EMBL
BABH01021699    GAIX01003786    JAA88774.1    NWSH01001413    PCG71320.1    AGBW02005277    + More
OWR55316.1    ODYU01008187    SOQ51576.1    KQ460949    KPJ10486.1    KQ459185    KPJ03246.1    AK401671    BAM18293.1    KK107126    QOIP01000008    EZA58429.1    RLU19254.1    GL443213    EFN62366.1    UZAH01026555    VDO82356.1    GALX01006468    JAB61998.1    KZ288203    PBC33450.1    GL448826    EFN83681.1    GG666620    EEN48274.1    UYSL01025628    VDL84619.1    KQ775154    OAD52275.1    APGK01008348    APGK01013783    APGK01057784    BT127813    KB741282    KB739113    KB737669    KB631802    AEE62775.1    ENN70778.1    ENN82381.1    ENN82966.1    ERL86228.1    GECZ01012771    JAS56998.1    KQ435752    KOX76220.1    GEBQ01012416    JAT27561.1    GL887888    EGI69664.1    KQ981153    KYN08922.1    KQ982548    KYQ55229.1    AXCM01001953    KQ978251    KYM95981.1    APCN01000751    GEZM01003452    JAV96800.1    AAAB01008964    EAA12242.4    GBXI01008579    JAD05713.1    GDIP01242684    LRGB01002101    JAI80717.1    KZS09164.1    GDIQ01191182    JAK60543.1    KQ981906    KYN33229.1    AXCN02000748    JH818171    EKC37377.1    GDHF01016565    JAI35749.1    KZ345984    PIO71332.1    UZAF01020339    VDO68993.1    KQ971351    KYB26853.1    KE124844    JARK01001362    EPB77135.1    EYC18821.1    ATLV01014417    KE524970    KFB38706.1    NEDP02004063    OWF46912.1    GAMC01005274    JAC01282.1    DS231860    EDS39323.1    GFDL01008633    JAV26412.1    EYC18820.1    GCES01147341    JAQ38981.1    BC141775    AAI41776.1    GDAI01000665    JAI16938.1    GDIQ01257700    JAJ94024.1    GBSH01002714    JAG66313.1    KQ976424    KYM88431.1    ADTU01012968    NNAY01001180    OXU24834.1    GGFK01012165    MBW45486.1    GGFK01012204    MBW45525.1    GAMC01005273    JAC01283.1    AYCK01005653    JRES01001284    JRES01000418    KNC23938.1    KNC31446.1    HACG01030578    CEK77443.1    IACK01104237    LAA84046.1    CU694487    BC076454    AAH76454.1    HADW01012119    HADX01004729    SBP26961.1    AZIM01003163    ETE62598.1    IACL01123176    LAB17349.1    GBYB01005589    JAG75356.1    GGFM01005273    MBW26024.1    GGFJ01010411    MBW59552.1    GFDG01003658    JAV15141.1    KQ414617    KOC68062.1    ABKE03000093    PDM66847.1    GAMC01005275    JAC01281.1   
Pfam
PF00293   NUDIX        + More
PF00415   RCC1
Interpro
IPR020084   NUDIX_hydrolase_CS        + More
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR003565   Tetra_PHTase       
IPR000086   NUDIX_hydrolase_dom       
IPR000408   Reg_chr_condens       
IPR009091   RCC1/BLIP-II       
SUPFAM
SSF55811   SSF55811        + More
SSF50985   SSF50985       
Gene 3D
PDB
1KTG     E-value=1.10421e-35,     Score=369

Ontologies

Topology

Length:
140
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03254
Exp number, first 60 AAs:
0.03254
Total prob of N-in:
0.09500
outside
1  -  140
 
 

Population Genetic Test Statistics

Pi
128.118015
Theta
130.493233
Tajima's D
-0.254542
CLR
63.277526
CSRT
0.306734663266837
Interpretation
Uncertain
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