SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11648
Pre Gene Modal
BGIBMGA003999
Annotation
PREDICTED:_zinc_finger_protein_608-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.713
 

Sequence

CDS
ATGTTCGTGATAATGGAGACTGCAGAAGTGTGTGTGGGAACGTCAGTCGGCACAATCACTGAGCCGGACTGCCTCGGGCCCTGCGAGCCTGGTACCTCGGTCACACTGGAGGGCATCGTCTGGCATGAGACGGAAGGTGTATTAGTTGTAAACGTGACGTGGCGAGGGAAGACTTACGTGGGAACCCTACTGGATTGCACGCGACACGACTGGGCGCCACCGCGGTTCTGTGATTCTCCAACGGAAGAATTAGATTCGCGCACACCTAAAGGACGAGCGAAACGTGGTCGCGGGGCGGCGCCCACGGACATGACGAATTTCACAGAAACGCGATCATCAGTCCACAGCAAACTCCGAAACGGGGGAGCGAAAGGCCGAAGAGCTTTGCCGTCACCCACTCCATTCACTCCGCCGAGACCGGATTCGAAAAGAAAAAGAAATTCAGAAGCGGACGAACGACCGCCCACGCCGAAGGCGAAGCGGCCGCCGCCTACGCCGTCGTCGCCGCCGCCCGACCCGATCCTTCTCGAGTGTCCCGAACCGAATTGTTCCAAAAAATACAAACACGCGAACGGTTTGAAATATCATCGATCACACGCACACGGTTCGCCCGATGAGGAAGACAAAGACGAGTCCAGCTCGGAACTGGAAGAGCCTGCGGTGGAGCCAGCTTCGCCGGCGTGTCCGCCGTCCGAGCCCGCCACGCCCGCCACCCCGGTCAAATCTCCAACTCCCGCAAAGTCCCCGGAATCTAAGAGCGAGAAGTCTCCAGAAAAGTCGCCAGAGAAGGTGGAGACAAATGCGGAGTCCCCCGCGCAGACAAGATTCCCAGAGGAGATGGCCGCGACGCCGGAAACACCTGCCCCCCCAGAGCGTGCGCATACCCCGCCCGCACCCCCTGCCACGCCGCCTGAGCCTCTGCCTTCCTTACAGACTACACAATTTAAGGTGAAACCTAGATCAGCGTTGATGCCGTCAGAGGATCGTAAGTCCACGGAATCTCCTCCCGGCGAGTCCCCGGGTAAGCGCCGGGCGCGGCGCTCGCCGACCCCCGGGGTGCGGTCGCCGGCCTACTCCGACATCTCGGACGACGCGGCGCCCCCCGACGGAGCCCCCGATACGGACACCACCCACAGACCCTTCCCCGTCTACCACCAGTATTACGGTCAGCCGTCGTATCTACCGCCGAGTCACCCGGCGACAGGACCGCCTCCTACCGGGGACAAGAGCAAAGAAGATCCGTCCAAAGGAGATTCTAAAGGAGACCATAAGGACGGCAAAACCGATAACGGACCGCAAAAGGTGCTTCCGCAACATTTCTACCCGTACAATTACGTACCGAATTTTCCGTACAACGTGGAACCGGGGACGCCTTTGGAAGACAAGAGCAAAGAGACTGACCGATCGAAGACAACGCCCAGCCCTTTGGACAAGAACAAGCCCAGGGAGGGGAAAGACAACCAGAACAGACCGAACGACAACCATCAGATCCTCAAAGAGAGTATTGAGATGAAGGCGCAGATGGGACCGTACGCGTTCCAGAGGCCTCCGCACGGGAGGGAAGAAGAATTGAGGAGATATTACATGAGCTTAGAGCAAAGAAGAAAAGACGGTGGGGGCGACTCGAAGCCTCCGAACCAGGGAGCAGGGGTCCCTCCCAGACCGGCGCCGCAGCCCGCGCACAAGTCCTCTGGAAAAGATAAAGACGAAAAACCCAAGGACGACGTTAAAGTGAAGCAAGAAGGTCAGAAGCCGACGACGGAAACGCAAGGGCCGCCGCCCCCGCCCACGTCGCAGTACTACCTGCCGCCCTACATGCAGGGCGGGTACGGCGCCCTGCAGTTCGAGCCGGTGTACCGCGGGCCGCTGTCCCCCATGCTGGTGGGCGGGTACGGCGCCGGCTGGAGCGTGCCGCGGTACCCGGCGCCCGAGGACCTGTCCCGCCCCGCGCCGCCCAAACTGGACCTGCTGCCCCCCGCACACGCGCCCTACGCCTATCCGCCCCACACCGGCCATCCGCCCCACGCGCCCCACGCCTCCCACGCGCCCCATACGCCGCACGCGCAACACAAAATCCACGAGCTGCAGGAGCACGCGAAGTCTCCGTCGGGGAAGCCCCGCGCCGACGCCCCCAAGGAGGGCGCACGCTCGCCCCCGCCGCAGCGGCACGTGCACACGCACCACCACACGCACGTCGGGCTCGGCTACCCGCTCTACCCGCCGCCGTATCCCGGCGCGCGATAG
Protein
MFVIMETAEVCVGTSVGTITEPDCLGPCEPGTSVTLEGIVWHETEGVLVVNVTWRGKTYVGTLLDCTRHDWAPPRFCDSPTEELDSRTPKGRAKRGRGAAPTDMTNFTETRSSVHSKLRNGGAKGRRALPSPTPFTPPRPDSKRKRNSEADERPPTPKAKRPPPTPSSPPPDPILLECPEPNCSKKYKHANGLKYHRSHAHGSPDEEDKDESSSELEEPAVEPASPACPPSEPATPATPVKSPTPAKSPESKSEKSPEKSPEKVETNAESPAQTRFPEEMAATPETPAPPERAHTPPAPPATPPEPLPSLQTTQFKVKPRSALMPSEDRKSTESPPGESPGKRRARRSPTPGVRSPAYSDISDDAAPPDGAPDTDTTHRPFPVYHQYYGQPSYLPPSHPATGPPPTGDKSKEDPSKGDSKGDHKDGKTDNGPQKVLPQHFYPYNYVPNFPYNVEPGTPLEDKSKETDRSKTTPSPLDKNKPREGKDNQNRPNDNHQILKESIEMKAQMGPYAFQRPPHGREEELRRYYMSLEQRRKDGGGDSKPPNQGAGVPPRPAPQPAHKSSGKDKDEKPKDDVKVKQEGQKPTTETQGPPPPPTSQYYLPPYMQGGYGALQFEPVYRGPLSPMLVGGYGAGWSVPRYPAPEDLSRPAPPKLDLLPPAHAPYAYPPHTGHPPHAPHASHAPHTPHAQHKIHELQEHAKSPSGKPRADAPKEGARSPPPQRHVHTHHHTHVGLGYPLYPPPYPGAR

Summary

Interpro
IPR040010   ZN608/ZN609        + More
IPR013087   Znf_C2H2_type       

Ontologies

Topology

Length:
747
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00215
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00007
outside
1  -  747
 
 

Population Genetic Test Statistics

Pi
176.294203
Theta
154.01604
Tajima's D
-1.018252
CLR
0.839017
CSRT
0.134693265336733
Interpretation
Uncertain
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