Silkworm Genome Informatics Database

Gene

KWMTBOMO11643

Pre Gene Modal

BGIBMGA004003

Annotation

PREDICTED:_calphotin_[Bombyx_mori]

Location

Bomo_Chr19(-):10437664-10438742 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.334 PlasmaMembrane Reliability : 1.312

CDS

ATGAAATTCCTCGTTGCTTTCGTTGCTATCGTAGCTGTGGCTGCCGCTAGCCCCATCAAACCCGCTGAGACTAATGCTGAGCTGCAAGCCATTCTGGACGCTATCCACAGCCCCAGCACAGACCCAGCCACCGCTGCTCTCCTTCTCGAGCATCTGCACGAAATCCTCGTCGCTCTCAACCCCATACAGGAGCCTGTCTTCGGACCCGAAATCATCGACTTCCCTCTTCCCGACGGTGGTGCTGTCACTGAGCCAATCGTGCCCTCCCCTGTTATCGTTGGACCAGTCGCACCAGGCCAGCCCGCTCCTCTCGTTCAGATCATTGTGAACGTGAACCAGCCAGGCGCTGATGCAGCTATCATTCCCCAGCCCGTCATTGTTGACGAGTCTGATGAAGTCAAACCCGACCCCGTTATTATCGCCGAAGAGGCTGAAGAAGGCCCCATTGTCCCTGAGCCCGTAATCGTTGCTCCCATCAACCCCATCCCAGTCGCCCCCGTCATCATTGGAACCCCCATCATACCCTCTCCTGCCGTCACCCTCCCTGAGGAGCTCAACTAA

Protein

MKFLVAFVAIVAVAAASPIKPAETNAELQAILDAIHSPSTDPATAALLLEHLHEILVALNPIQEPVFGPEIIDFPLPDGGAVTEPIVPSPVIVGPVAPGQPAPLVQIIVNVNQPGADAAIIPQPVIVDESDEVKPDPVIIAEEAEEGPIVPEPVIVAPINPIPVAPVIIGTPIIPSPAVTLPEELN

Uniprot

H9J3B6 D0VEP9 D0VEP8 D0VEQ0 A0A2A4K438 A0A0L7K4G4 + More
A0A2A4K3N7 A0A0L7K4L9 A0A2A4IXU8 A0A2A4K3P9 A0A1E1WMM8 A0A2A4K4U9 A0A1E1VY68 A0A1E1W889

Pubmed

19121390 26227816

EMBL

BABH01021672 BABH01021664 GU070723 ACY06933.1 GU070722 ACY06932.1 + More
BABH01021665 GU070724 ACY06934.1 NWSH01000182 PCG78668.1 JTDY01010596 JTDY01002454 KOB58163.1 KOB71377.1 KOB71379.1 PCG78669.1 KOB58162.1 NWSH01004670 PCG64787.1 PCG78679.1 GDQN01002877 JAT88177.1 PCG78680.1 GDQN01011378 JAT79676.1 GDQN01009274 GDQN01007856 JAT81780.1 JAT83198.1

Proteomes

UP000005204 UP000218220 UP000037510

PRIDE

D0VEQ0

ProteinModelPortal

H9J3B6 D0VEP9 D0VEP8 D0VEQ0 A0A2A4K438 A0A0L7K4G4 + More
A0A2A4K3N7 A0A0L7K4L9 A0A2A4IXU8 A0A2A4K3P9 A0A1E1WMM8 A0A2A4K4U9 A0A1E1VY68 A0A1E1W889

KEGG

101740574 no KO assigned | (RefSeq) 36.4 kDa proline-rich protein-like

GO

SignalP

Position: 1 - 16, Likelihood: 0.997178

Length:

186

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.42355

Exp number, first 60 AAs:

0.38932

Total prob of N-in:

0.04788

outside

1 - 186

Pi

256.405152

Theta

211.274954

Tajima's D

0.666704

CLR

0.002429

CSRT

0.566121693915304

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree