SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11637
Pre Gene Modal
BGIBMGA004123
Annotation
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.44
 

Sequence

CDS
ATGAAATTCCTCGTTGCCTTCGCCCTGATCGCCGTGGCTTCGGCCCGTGTCTTTGAACCTATTTCCGTTGGACCGGCACTCGTCGACACCTACGAACCCATCGACACCGAACCCGCCTACGTAGACATCCCTATCACTGACGGTGGTGTAGTGACTGCTCCCGTGAAGCCCACTCCTGTTGTCGTTGGACCTGCTGTTCCCTCCGGTGCCTCTCCTCTTGTGCAGCTCATCGTGAACGTCAACGTTCCCGCTGGTGTTTCTGATGGACCCGCTGAAATCAAGCCCGACCCCGTTATTGTCGCCGAAGAGGCTGAAGAGGGCCCCATTGTCCCTGTCCCTGAGCCCGTCATCGTTGCTCCCATCAACCCCATCCCCGTCGCCCCCGTCATCATTGGCACTCCCATCATTCCCGCTCCCGCCGTCACCCTCCCCGAGGAACTCAACTAA
Protein
MKFLVAFALIAVASARVFEPISVGPALVDTYEPIDTEPAYVDIPITDGGVVTAPVKPTPVVVGPAVPSGASPLVQLIVNVNVPAGVSDGPAEIKPDPVIVAEEAEEGPIVPVPEPVIVAPINPIPVAPVIIGTPIIPAPAVTLPEELN

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.997119
 
 
Length:
148
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21469
Exp number, first 60 AAs:
0.12871
Total prob of N-in:
0.03374
outside
1  -  148
 
 

Population Genetic Test Statistics

Pi
223.819683
Theta
205.292893
Tajima's D
0.224331
CLR
0
CSRT
0.429828508574571
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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