SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11635
Pre Gene Modal
BGIBMGA004123
Annotation
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.413
 

Sequence

CDS
ATGAAATTCCTCGTTGCCTTCGCCCTGATCGCCGTGGCTTCGGCCCGTGTCTTTGAACCAATTTCCGTTGGACCGGCACTCGTCGACACCTACGAACCCATCGACACCGAACCCGCCTACGTGGACATCCCTATCCCTGACGGTGGTGTAGTGACTGCTCCCGTGAAGCCCACTCCTGTTGTCGTTGGACCTGCTGTTCCCTCCGGTGCCTCTCCTCTTGTGCAGCTCATCGTGAACGTCAACGTCCCCACTGGTGTTTCTGTTGGACCCGCTGAAATCAAGCCCGAGCCCGTTATTGTCGTCGAAGAGGCTGAAGAGGGCCCCATTGTCCCTGAGCCCGTCATCGTTGCTCCCATCAACCCCACCCCTGTTGTCCCTGAGCCCGTCATCGTTGCTCCCATCAGCCCCGTCCCCGTCTCCCCCGTCATCATTGGCACTCCCATCATTCCCACTCCCGCCGTCACCCTCCCCGAGGAGCTTAACTAA
Protein
MKFLVAFALIAVASARVFEPISVGPALVDTYEPIDTEPAYVDIPIPDGGVVTAPVKPTPVVVGPAVPSGASPLVQLIVNVNVPTGVSVGPAEIKPEPVIVVEEAEEGPIVPEPVIVAPINPTPVVPEPVIVAPISPVPVSPVIIGTPIIPTPAVTLPEELN

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.997007
 
 
Length:
161
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14426
Exp number, first 60 AAs:
0.11582
Total prob of N-in:
0.02878
outside
1  -  161
 
 

Population Genetic Test Statistics

Pi
188.351043
Theta
153.724745
Tajima's D
0.529826
CLR
0
CSRT
0.521573921303935
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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