SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11634
Pre Gene Modal
BGIBMGA004121
Annotation
PREDICTED:_calphotin_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.323
 

Sequence

CDS
ATGAAATACCTCGTTGTCCTCGCCCTGATCGCCGTATCCTCGGCCGCCTACATCAAGCCTGCTCCCGTCAGCGCAGAGCATGCAGAGCTCCAGGCTATCATCGACGCCATCAATAGTCCCAGCACCGACCCCGCTACCGCTGCCGCCCTCACTGAAATGCTCTACAGCTATCTCGGAGTCAGTCCCCAGCCCATCCACATTGGACCGGAAATCATCGACTTCCCTCTCCCAGACGGTGGTGCTGTGAGCGCACCCGTGAAGCCCACTCCCTCTCCTGCCGTTGTCGGACCGGCCGCTCCCAGCCAGAGCTCTCCTCTTGTGCAGCTCGTTGTGAACATCAACCAAGCCGCCGTCGGACCTGCTCCCGGACCAGTTGTTGAGCCCGTTGAGATCATCCCAGAGCCCGTCATTATCGTCGAAGAAGCTGAGGTTCCCGAAATCAAACCCGACCCCGTGATCATTGTTGAACCCACACCCGTGGTCCCCGAGCCCGTCATCGTTGCACCCATCAACCCCGTCCCCGTCGCGCCCGTTGTCATTGGCACACCCATCATTCCCGCCCCTGCTGTCACCCTCCCCGAGGAACTCAACTGA
Protein
MKYLVVLALIAVSSAAYIKPAPVSAEHAELQAIIDAINSPSTDPATAAALTEMLYSYLGVSPQPIHIGPEIIDFPLPDGGAVSAPVKPTPSPAVVGPAAPSQSSPLVQLVVNINQAAVGPAPGPVVEPVEIIPEPVIIVEEAEVPEIKPDPVIIVEPTPVVPEPVIVAPINPVPVAPVVIGTPIIPAPAVTLPEELN

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.994794
 
 
Length:
197
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.53198
Exp number, first 60 AAs:
0.49357
Total prob of N-in:
0.05139
outside
1  -  197
 
 

Population Genetic Test Statistics

Pi
124.931689
Theta
172.25565
Tajima's D
-0.914202
CLR
0.698488
CSRT
0.154942252887356
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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