SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11633
Pre Gene Modal
BGIBMGA004007
Annotation
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.41
 

Sequence

CDS
ATGAAATACCTCGTTGTCCTCGCCCTGATCGTCGTATCCTCGGCCGCCTTCATCAAGCCTGCTCCCGTCAGCGCAGAGCATGCAGAACTCCAGGCTATCATCGACGCCATCAATAGTCCCAGCACCGACCCCGCTACCGCTGCCGCCCTCACTGAAATGCTCTACAGCTTTCTCGGAGTCAGTCCCCAGCCCATCCACATTGGACCGGAAATTATCGACTTCCCTCTCCCAGACGGTGGTGCTGTGAGCGCACCCGTGAAGCCCACTCCCTCTCCTGCCGTTGTCGGACCCGCCGCTCCCAGCCAGAGCTCTCCTCTTGTGCAGCTCGTTGTGAACATCAACCAAGCCGCCGTCGGACCTGCTCCCGGACCAGTTGTTGAGCCCGTTGAGATCGTCCCAGAGCCCGTCATTATCGTCGAAGAAGCTGAGGTTCCCGAAATCAAACCCGACCCCGTGATCATTGTTGAACCCACACCCGTGGTCCCCGAGCCCGTCATCGTTGCACCTATCAACCCCATCCCCGTCGCCCCCGTTATCATTGGCACACCCATCATTCCCGCACCTGCTGTCACCCTCCCCGAAGAGCTCAACTAA
Protein
MKYLVVLALIVVSSAAFIKPAPVSAEHAELQAIIDAINSPSTDPATAAALTEMLYSFLGVSPQPIHIGPEIIDFPLPDGGAVSAPVKPTPSPAVVGPAAPSQSSPLVQLVVNINQAAVGPAPGPVVEPVEIVPEPVIIVEEAEVPEIKPDPVIIVEPTPVVPEPVIVAPINPIPVAPVIIGTPIIPAPAVTLPEELN

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.989032
 
 
Length:
197
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.98227
Exp number, first 60 AAs:
1.89559
Total prob of N-in:
0.10962
outside
1  -  197
 
 

Population Genetic Test Statistics

Pi
391.947515
Theta
182.650317
Tajima's D
3.60553
CLR
6.136772
CSRT
0.996250187490625
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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