SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11632  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004008
Annotation
hypothetical_protein_RR46_06421_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 1.941
 

Sequence

CDS
ATGAGGTTGCTCTCGGTACTCCGCGGGCCACCTTCCAGCAACAATGCGAGAAGACCACAAAGAGAACCTGTTCCCTTCAAACTGTTATTACCTCTGGAACTAAAGAAAACTGTTTCAGGAAAAGGAGACAAGCAAAAGGAAAGTGCATGTATGCAAGAATTGGCTGTGATGTTCGCTTGTTTTAAAAAAGCTGATTTTAATGAACAAAAATGCCTTAAAGAGGTTACCGCTTTCAGTAGTTGTTTCAAAGAATATTCAGAAAGGATGGCCACTCAAAGAGAACAAGGGAAAAAAGGAATCCTGGTGCCCGGAGAGAAGAAGTTAACACATCGACAAATGAATGAACTATTAAAACGGTTTCCTCCCAAAAAGTAA
Protein
MRLLSVLRGPPSSNNARRPQREPVPFKLLLPLELKKTVSGKGDKQKESACMQELAVMFACFKKADFNEQKCLKEVTAFSSCFKEYSERMATQREQGKKGILVPGEKKLTHRQMNELLKRFPPKK

Summary

EMBL
BABH01021663    GDQN01011522    JAT79532.1    ODYU01004187    SOQ43780.1    KQ459185    + More
KPJ03265.1    NWSH01000182    PCG78676.1    KQ460949    KPJ10507.1    GAIX01006347    JAA86213.1    JTDY01009134    KOB64063.1    JTDY01000267    KOB77997.1    AGBW02014399    OWR41745.1    KK852564    KDR21265.1    PYGN01000086    PSN54692.1    KK854110    PTY11448.1    GFDL01002724    JAV32321.1    GAPW01006100    JAC07498.1    JXUM01083585    KQ563386    KXJ73935.1    GDKW01002965    JAI53630.1    ACPB03028525    AAAB01008964    EDO63590.1    APCN01002478    GDIQ01269856    GDIP01031466    GDIQ01008101    JAJ81868.1    JAM72249.1    GDRN01049166    JAI66598.1    CH477232    EAT46815.1    APGK01035349    BT127598    KB740923    KB632333    AEE62560.1    ENN78286.1    ERL92713.1    GDAI01001774    JAI15829.1    LRGB01000510    KZS18908.1    GEZM01007093    JAV95405.1    GFDG01002021    JAV16778.1    AXCM01003618    GBZX01002616    JAG90124.1    GGFJ01010843    MBW59984.1    ATLV01014730    KE524984    KFB39439.1    GAMD01002301    JAA99289.1    GGFM01007764    MBW28515.1    GGFK01009766    MBW43087.1    GGFJ01010781    MBW59922.1    AXCN02000770    GL732564    EFX77178.1    GACK01006498    JAA58536.1    GBBK01001328    JAC23154.1    GECL01002282    JAP03842.1    ADMH02000936    ETN64633.1    GFAA01000707    JAU02728.1    JRES01000655    KNC29558.1    GBBM01005905    JAC29513.1    JO843250    AEO34867.1    GBBM01005904    JAC29514.1    GECU01022370    JAS85336.1    GFAC01007045    JAT92143.1    GEDV01006575    JAP81982.1    GBBL01000648    JAC26672.1    GECZ01027651    JAS42118.1    JXJN01021584    CH933808    EDW08543.1    GEDC01019949    JAS17349.1    CCAG010018997    AJVK01059120    GEFH01003693    JAP64888.1    GANO01003651    JAB56220.1    CP012524    ALC40890.1    GAKP01006894    JAC52058.1    GBYB01007022    JAG76789.1    GDHF01018074    GDHF01012922    JAI34240.1    JAI39392.1    KQ980874    KYN12047.1    OUUW01000001    SPP74525.1    CH954179    EDV57063.1    DQ886878    ABI52795.1    GBXI01013704    JAD00588.1    CH963849    EDW73927.1    CM000158    EDW92596.1    CM002911    KMY96421.1    CH480838    EDW49251.1    CM000362    EDX08609.1    AY190953    CH940648    AAO01075.1    EDW60052.1    AE013599    BT029049    AAF47263.2    ABJ16982.1    GFDF01009783    JAV04301.1    CH916367    EDW01623.1    NNAY01000733    OXU26761.1    CH475809    KRT05300.1    KRT05301.1   
Pfam
PF06747   CHCH
Interpro
IPR009069   Cys_alpha_HP_mot_SF        + More
IPR033620   CHCHD1       
IPR010625   CHCH       
SUPFAM
SSF47072   SSF47072       
PDB
6NF8     E-value=8.28153e-05,     Score=102

Ontologies

Topology

Length:
124
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06319
outside
1  -  124
 
 

Population Genetic Test Statistics

Pi
145.869255
Theta
150.743472
Tajima's D
-0.101648
CLR
306.88901
CSRT
0.341532923353832
Interpretation
Uncertain
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