Gene

KWMTBOMO11630  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004009

Annotation

PREDICTED:_NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_4?_mitochondrial_[Bombyx_mori]

Location

Bomo_Chr19(-):10328341-10329742      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.994

CDS

ATGTTCAAAGCTATCTGCCAGACAGCAGGTTTATCGAAGAACCATTTATCAAGGTTTAAAGGTGCGTTTTCAACGTACAATGTTCGCTATGCTGATGCAGATCCAACATGCCGAAAGGAAGCACCTAAAATTGAAAACGAATCCGTTTTGGCCTTGCCAGAAGAAGCTCGGCATCAAAAAGCACTGGATTCCACTATTGTAGTGCCAACGAAGGCAGATCTCAGCCCCATTTTAGGAGTCCCAGAAGAACATATTAAGACTCGCCGTGTACGTATTTATCAACCTGCGAAGAATGCAATGCAGAGTGGTACAAATAATATCCATCATTGGGAAATGGAATTTGACACTCGTCAACGTTGGGAAAATCCTCTGATGGGCTGGACATCCTCAGGAGATCCTCTGTCCAATGTCAAAATTCAGTTCAGATCTCCTGATGAAGCAATTGAGCATTGTGAGAAAAATGGATGGATGTGGTACATTGATGTTCCTAAAACCGAGAAGGATTTCAAACCTAAAAGCTATGGGTTAAATTTCGCTTGGAATCGTCGTACTCGAGTCTCCACTAAGTAA

Protein

MFKAICQTAGLSKNHLSRFKGAFSTYNVRYADADPTCRKEAPKIENESVLALPEEARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYIDVPKTEKDFKPKSYGLNFAWNRRTRVSTK

Uniprot

H9J3C2   A0A3S2LEE0   A0A0L7K2K5   A0A0L7KS09   I4DKW5   S4PBD3   + More
A0A2A4K4I5   A0A212EJT2   A0A2H1W2F4   A0A194QCS2   A0A194QZV6   A0A1S4FZX0   Q1HQJ3   A0A336ME65   A0A023EI55   A0A182MEA9   B0WNZ1   A0A1Q3FLJ6   A0A182G4L5   A0A182QS13   A0A2M3ZHB0   A0A182PUC9   A0A182WLE1   A0A2M4AEL7   A0A2M4ADM8   A0A1Q3FLD9   A0A182R4L0   T1E8B4   A0A2M4C113   A0A2M3Z6B5   V5FZ49   W5JMU6   A0A182UZG8   A0A182NJB5   A0A182JQ10   A0A182KQ91   A0A182I2E5   A0A182U7R4   A0A182WWU8   Q7QIU8   A0A1L8EB97   A0A1L8EBD0   A0A182YEG8   D6WRS0   A0A1L8EBQ0   W8BQI5   A0A023EI95   A0A1I8PAC5   A0A182JI99   A0A2P8YNN9   A0A034VYN1   A0A0K8TTY8   A0A0K8UH60   A0A0K8VS39   A0A182FHE4   A0A1L8E1B8   A0A1J1HKV8   T1P7U0   A0A195ETL9   J3JW97   A0A084WEE3   F4W7K4   A0A1A9XH63   N6UL43   A0A1B0AN88   A0A1A9ZIC8   A0A1A9VRT6   D3TP40   A0A195EM17   A0A195ATM8   A0A151X8K5   U5ENZ8   Q1EC13   Q9VWI0   E9IH01   A0A1A9WSY9   B4JX23   A0A067QML1   A0A158NPP1   A0A1W4XLA4   A0A1B6F0J7   A0A1L8E067   T1H621   B4I754   B4R7Q4   A0A1B6D4W0   A0A3B0KMY2   A0A026WTU2   A0A1B6J299   A0A1B6HC53   B3NVN6   B4PZI0   B3MPT3   A0A1W4VFU8   A0A0M5J3H5   Q29IW0   B4GW60   B4NDP7   A0A226F584  

Pubmed

19121390    26227816    22651552    23622113    22118469    26354079    + More
17204158    17510324    24945155    26483478    20920257    23761445    20966253    12364791    14747013    17210077    25244985    18362917    19820115    24495485    29403074    25348373    26369729    25315136    22516182    24438588    21719571    23537049    20353571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21282665    17994087    24845553    21347285    24508170    30249741    17550304    15632085   

EMBL

BABH01021656    RSAL01000182    RVE44902.1    JTDY01016114    KOB51913.1    JTDY01006349    + More
KOB66082.1    AK401933    BAM18555.1    GAIX01005967    JAA86593.1    NWSH01000182    PCG78673.1    AGBW02014399    OWR41747.1    ODYU01005906    SOQ47280.1    KQ459185    KPJ03267.1    KQ460949    KPJ10510.1    DQ440451    CH478093    ABF18484.1    EAT33995.1    UFQS01001050    UFQT01001050    SSX08722.1    SSX28634.1    GAPW01004826    JAC08772.1    AXCM01003059    DS232017    EDS32010.1    GFDL01006628    JAV28417.1    JXUM01143932    KQ569689    KXJ68541.1    AXCN02000449    GGFM01007161    MBW27912.1    GGFK01005915    MBW39236.1    GGFK01005573    MBW38894.1    GFDL01006615    JAV28430.1    GAMD01002918    JAA98672.1    GGFJ01009842    MBW58983.1    GGFM01003315    MBW24066.1    GALX01005511    JAB62955.1    ADMH02001105    ETN64094.1    APCN01000152    AAAB01008807    EAA03929.4    GFDG01002759    JAV16040.1    GFDG01002761    JAV16038.1    KQ971354    EFA07540.1    GFDG01002760    JAV16039.1    GAMC01003060    JAC03496.1    GAPW01004962    JAC08636.1    PYGN01000467    PSN45824.1    GAKP01011777    GAKP01011775    JAC47177.1    GDAI01000178    JAI17425.1    GDHF01026315    JAI25999.1    GDHF01010934    JAI41380.1    GFDF01001722    JAV12362.1    CVRI01000006    CRK88170.1    KA644602    AFP59231.1    KQ981986    KYN31224.1    BT127515    AEE62477.1    ATLV01023205    ATLV01023206    KE525341    KFB48587.1    GL887844    EGI69877.1    APGK01019290    KB740098    KB631733    ENN81406.1    ERL85652.1    JXJN01000753    CCAG010022322    EZ423192    ADD19468.1    KQ978730    KYN28967.1    KQ976745    KYM75412.1    KQ982409    KYQ56664.1    GANO01003879    JAB55992.1    BT025921    ABG02165.1    AY070680    AE014298    AAL48151.1    AAN09490.1    GL763122    EFZ20154.1    CH916376    EDV95299.1    KK853156    KDR10482.1    ADTU01022673    GECZ01026920    GECZ01026064    GECZ01019914    GECZ01017293    GECZ01009570    JAS42849.1    JAS43705.1    JAS49855.1    JAS52476.1    JAS60199.1    GFDF01001934    JAV12150.1    CH480823    EDW56152.1    CM000366    EDX18387.1    GEDC01016615    JAS20683.1    OUUW01000044    SPP89990.1    KK107105    QOIP01000011    EZA59480.1    RLU17038.1    GECU01014420    JAS93286.1    GECU01035439    GECU01034026    JAS72267.1    JAS73680.1    CH954180    EDV46701.1    CM000162    EDX02136.1    CH902621    EDV44695.1    CP012528    ALC49936.1    CH379063    EAL32543.1    CH479193    EDW26905.1    CH964239    EDW81869.1    LNIX01000001    OXA64617.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000218220    UP000007151    UP000053268    + More
UP000053240    UP000008820    UP000075883    UP000002320    UP000069940    UP000249989    UP000075886    UP000075885    UP000075920    UP000075900    UP000000673    UP000075903    UP000075884    UP000075881    UP000075882    UP000075840    UP000075902    UP000076407    UP000007062    UP000076408    UP000007266    UP000095300    UP000075880    UP000245037    UP000069272    UP000183832    UP000095301    UP000078541    UP000030765    UP000007755    UP000092443    UP000019118    UP000030742    UP000092460    UP000092445    UP000078200    UP000092444    UP000078492    UP000078540    UP000075809    UP000000803    UP000091820    UP000001070    UP000027135    UP000005205    UP000192223    UP000015102    UP000001292    UP000000304    UP000268350    UP000053097    UP000279307    UP000008711    UP000002282    UP000007801    UP000192221    UP000092553    UP000001819    UP000008744    UP000007798    UP000198287   

PRIDE

H9J3C2    Q1EC13    Q9VWI0   

Pfam

PF04800   ETC_C1_NDUFA4

Interpro

IPR038532   NDUFS4-like_sf        + More
IPR006885   NADH_UbQ_FeS_4_mit       

Gene 3D

3.30.160.190    

ProteinModelPortal

H9J3C2   A0A3S2LEE0   A0A0L7K2K5   A0A0L7KS09   I4DKW5   S4PBD3   + More
A0A2A4K4I5   A0A212EJT2   A0A2H1W2F4   A0A194QCS2   A0A194QZV6   A0A1S4FZX0   Q1HQJ3   A0A336ME65   A0A023EI55   A0A182MEA9   B0WNZ1   A0A1Q3FLJ6   A0A182G4L5   A0A182QS13   A0A2M3ZHB0   A0A182PUC9   A0A182WLE1   A0A2M4AEL7   A0A2M4ADM8   A0A1Q3FLD9   A0A182R4L0   T1E8B4   A0A2M4C113   A0A2M3Z6B5   V5FZ49   W5JMU6   A0A182UZG8   A0A182NJB5   A0A182JQ10   A0A182KQ91   A0A182I2E5   A0A182U7R4   A0A182WWU8   Q7QIU8   A0A1L8EB97   A0A1L8EBD0   A0A182YEG8   D6WRS0   A0A1L8EBQ0   W8BQI5   A0A023EI95   A0A1I8PAC5   A0A182JI99   A0A2P8YNN9   A0A034VYN1   A0A0K8TTY8   A0A0K8UH60   A0A0K8VS39   A0A182FHE4   A0A1L8E1B8   A0A1J1HKV8   T1P7U0   A0A195ETL9   J3JW97   A0A084WEE3   F4W7K4   A0A1A9XH63   N6UL43   A0A1B0AN88   A0A1A9ZIC8   A0A1A9VRT6   D3TP40   A0A195EM17   A0A195ATM8   A0A151X8K5   U5ENZ8   Q1EC13   Q9VWI0   E9IH01   A0A1A9WSY9   B4JX23   A0A067QML1   A0A158NPP1   A0A1W4XLA4   A0A1B6F0J7   A0A1L8E067   T1H621   B4I754   B4R7Q4   A0A1B6D4W0   A0A3B0KMY2   A0A026WTU2   A0A1B6J299   A0A1B6HC53   B3NVN6   B4PZI0   B3MPT3   A0A1W4VFU8   A0A0M5J3H5   Q29IW0   B4GW60   B4NDP7   A0A226F584  

PDB

5GUP     E-value=1.35438e-36,     Score=379

KEGG

101739007    K03937 NADH dehydrogenase (ubiquinone) Fe-S protein 4 | (RefSeq) NADH dehydrogenase [ubiquinone] iro

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016651   GO:0022900   GO:0008137   GO:0005747   GO:0032981   GO:0001518   GO:0005248   GO:0006814   GO:0005216   GO:0006811   GO:0016020   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR12219  

Length:

189

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.25058

outside

1  -  189

 

 

Pi

132.125827

Theta

126.876972

Tajima's D

-0.54722

CLR

3.908907

CSRT

0.230638468076596

Interpretation

Uncertain