Gene
KWMTBOMO11624
Annotation
PREDICTED:_voltage-dependent_cation_channel_SC1_isoform_X2_[Bombyx_mori]
Full name
Sodium channel protein
Location in the cell
Cytoplasmic Reliability : 1.795 Nuclear Reliability : 1.865
Sequence
CDS
ATGGACGAGGACGAAAGGCGGCTCTCGTTTCCGCCGCCGGCGCCGCTCAACTCGCCCGGCGAAGAGATCGATGGCTCACGCCTGCTCGGCGAGATCGTGCGGACCCTCGAGGCCACAAACCCCGAGGCCGCAGCGCCGCTCGTTGCTTCACAGTCACGCGATGCTCTCGATTCAGAATGTGAGAAACCCCGTCGCGAGGAACTGCGCATCCCACTCGAAGGTGTTAAGTTCTCGAGCGAGATCAACGGTGGCAGCGGTGGCGGGGGCGGAGGGCGAGAAGAGCCCCGGGCTGCGGTCACGCCGTTCACGCGGGAGTCTGCGAGGCGCGCTGGGTCGCGGGGGGCACAGCTCGTGCGTGAATTTGGCTTCATGCCGCGGCGCCGACTTAGCGTTGAAGATGGCGCGCGCCTTCCACGGAAGTACGAGCCGTTTCCGCCTAAGCTGTATGGACGGCCGCTCGAAGAAATTGATAATTTCATTTATGATGAGGTAAGCTTTTAG
Protein
MDEDERRLSFPPPAPLNSPGEEIDGSRLLGEIVRTLEATNPEAAAPLVASQSRDALDSECEKPRREELRIPLEGVKFSSEINGGSGGGGGGREEPRAAVTPFTRESARRAGSRGAQLVREFGFMPRRRLSVEDGARLPRKYEPFPPKLYGRPLEEIDNFIYDEVSF
Summary
Description
Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
Similarity
Belongs to the sodium channel (TC 1.A.1.10) family.
Uniprot
EMBL
Proteomes
PRIDE
Interpro
Gene 3D
ProteinModelPortal
Ontologies
KEGG
Topology
Subcellular location
Cell membrane
Length:
166
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10896
outside
1 - 166
Population Genetic Test Statistics
Pi
182.653953
Theta
168.717929
Tajima's D
0.259806
CLR
0.255084
CSRT
0.438678066096695
Interpretation
Uncertain
