Silkworm Genome Informatics Database

Gene

KWMTBOMO11621 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004116

Annotation

Two-component_sensor_histidine_kinase_/_two-component_response_regulator_[Operophtera_brumata]

Location

Bomo_Chr19(+):10098459-10102049 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.642 Nuclear Reliability : 1.964

CDS

ATGTCTGTCCCAACAGTAACGGTAAGGGAATTGTCTGACGCGATCAACGACAACACCGTCAACGCGACCCCTAAAAAGGTCTTGGAAGGTATCCTCAACGACTACATGGACCTTCAGTACGCCAAGGAGACGCCGTACACCACAGGCAAGCAGGTCCTTCCCACCGGCACGACTATTGATGACGTAGACAAGTCCATCTCTGACGACAGCGTCGAGAAGAAGTTCAACGATCTCTTTGTGAAAATTTCCGAGACGGAAAAGAGCGGTGACCATTCACCCCAATCAAAGAATGACGGAACATGGGATTCAAAACTTTCTCCCGTCTTAGTTTTAGTTAGACCTAATCTGTAA

Protein

MSVPTVTVRELSDAINDNTVNATPKKVLEGILNDYMDLQYAKETPYTTGKQVLPTGTTIDDVDKSISDDSVEKKFNDLFVKISETEKSGDHSPQSKNDGTWDSKLSPVLVLVRPNL

Uniprot

H9J3M9 A0A0L7LK84 A0A2A4J3L9 A0A2H1V9N1 A0A0N1PFR3 A0A212EH04 + More
A0A194QIJ4 A0A1E1W9J5

Pubmed

19121390 26227816 26354079 22118469

EMBL

BABH01021640 JTDY01000798 KOB75840.1 NWSH01003621 PCG66040.1 ODYU01001408 + More
SOQ37545.1 KQ460772 KPJ12495.1 AGBW02014995 OWR40751.1 KQ459185 KPJ03271.1 GDQN01007374 GDQN01000017 JAT83680.1 JAT91037.1

Proteomes

UP000005204 UP000037510 UP000218220 UP000053240 UP000007151 UP000053268 + More

PRIDE

H9J3M9

ProteinModelPortal

H9J3M9 A0A0L7LK84 A0A2A4J3L9 A0A2H1V9N1 A0A0N1PFR3 A0A212EH04 + More
A0A194QIJ4 A0A1E1W9J5

KEGG

101738780 no KO assigned | (RefSeq) uncharacterized LOC101738780

GO

GO:0016301

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.27138

outside

1 - 116

Pi

29.654527

Theta

36.243557

Tajima's D

-0.50476

CLR

165.957754

CSRT

0.24128793560322

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28556443	SPVLVLVRPNL	100.00	2e-08
28556443	KVLEGILNDYMDLQYAK	100.00	2e-06
28556443	KVLEGILNDYMDLQYAK	100.00	2e-06
28556443	KVLEGILNDYMDLQYAK	100.00	2e-06
28556443	KFNDLFVK	100.00	2e-06
28556443	ELSDAINDNTVNATPK	100.00	2e-06
28556443	VLEGILNDYMDLQYAK	100.00	8e-06
28556443	VLEGILNDYMDLQYAK	100.00	8e-06
28556443	VLEGILNDYMDLQYAK	100.00	8e-06
28556443	VLEGILNDYMDLQYAK	100.00	8e-06
28556443	VLEGILNDYMDLQYAK	100.00	8e-06
28556443	VLEGILNDYMDL	100.00	8e-06
28556443	QVLPTGTTIDDVDKSISDDSVEKK	100.00	8e-06
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	ELSDAINDNTVNATPK	100.00	1e-04
28556443	MDLQYAK	100.00	1e-04
28556443	VLATLAEAFR	100.00	1e-04
28556443	VLVRPNL	100.00	3e-04

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics