Silkworm Genome Informatics Database

Gene

KWMTBOMO11619

Pre Gene Modal

BGIBMGA004114

Annotation

PREDICTED:_proline-rich_extensin-like_protein_EPR1_[Amyelois_transitella]

Location

Bomo_Chr19(+):10075169-10077484 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.03

CDS

ATGAATAAAAAATCAATATACGCTTTAGTACCATCACCTGAAGGTTCAGCAACATGGACCATGAACGAGCTGAAGGAGGCTCTGAAAGACCAGAATACTAAGCCAGAATTGCGACCTGCAATCATGCAAGCTGTCGAACATCTGGATTACAACAACCATAACGGAAAACCAATGAACTCAATTGAAGTAAGTACGCCAGCTTTAGACATTTCAATTTGGACACTACCGGATTTGGAAAAGGCGATCAACAGCTCTGACACGAACCCAGAACTAGTGGATCTTTTAAAACAAGCCCTCAGTAAATGGACCGAGAAAAATCCGTCAGAAAAAAACAATAAAATTATAGTGGTCACACCTGTAGGTCTGGTGAAGACTCAGAAAACCGAAAAATCATCGTTATTCAAAAAGAAACCATAA

Protein

MNKKSIYALVPSPEGSATWTMNELKEALKDQNTKPELRPAIMQAVEHLDYNNHNGKPMNSIEVSTPALDISIWTLPDLEKAINSSDTNPELVDLLKQALSKWTEKNPSEKNNKIIVVTPVGLVKTQKTEKSSLFKKKP

Uniprot

H9J3M7 A0A2A4J1K0 A0A2H1W7B8 A0A2H1VN97 A0A2H1VNA2 A0A1E1WI88 + More
A0A1E1WJ14 A0A3S2LPR1 A0A2H1W6R2 A0A2H1W8A8 A0A194QCS7 A0A0N1I8I7

Pubmed

19121390 26354079

EMBL

BABH01021637 BABH01021638 NWSH01003621 PCG66037.1 ODYU01006672 SOQ48722.1 + More
ODYU01003470 SOQ42301.1 SOQ42300.1 GDQN01004334 JAT86720.1 GDQN01004070 JAT86984.1 RSAL01000420 RVE41803.1 SOQ48723.1 SOQ48724.1 KQ459185 KPJ03272.1 KQ460772 KPJ12493.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000053240

PRIDE

H9J3M7

Interpro

IPR026534 PRRC1

ProteinModelPortal

H9J3M7 A0A2A4J1K0 A0A2H1W7B8 A0A2H1VN97 A0A2H1VNA2 A0A1E1WI88 + More
A0A1E1WJ14 A0A3S2LPR1 A0A2H1W6R2 A0A2H1W8A8 A0A194QCS7 A0A0N1I8I7

KEGG

101738428 no KO assigned | (RefSeq) uncharacterized LOC101738428

GO

GO:0016021

PANTHER

PTHR23276

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000900000000000001

Exp number, first 60 AAs:

0.0006

Total prob of N-in:

0.34688

outside

1 - 138

Pi

173.590581

Theta

165.902198

Tajima's D

0.065879

CLR

0.106596

CSRT

0.388280585970701

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics