Gene

KWMTBOMO11617  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004113

Annotation

PREDICTED:_protein_PRRC1-like_[Amyelois_transitella]

Location

Bomo_Chr19(+):10054929-10063533      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.014

CDS

ATGAGTTCTGATAGAAAAAAGATTCCTGACCCTCCGACACCAGTTCCTTCAACTGGCAATTTGCTTTCAAATGTAGCACCACCGCTTCAACTTCCAAATTTTGTGACTGCTGTCGCTGAACCAATGCCTACGTCCCAGCGTGAACCGGTGGAGCATCCAGTCCCAGTTCAGCCAATAGTAATACAACAACCTACGAAGATAGATCAGCAAGCATCAGAGAAGTTTTGCCCTGCAATCCCGCCTAGTAAAGGAACACCATTAATGTCTATACGATCACCCGAAGACTCGGAGACTGCACAAACTCCAGAATCCATACCAGAAATTTCACCCGAGATGGATTCATTCAGTGATATAATGCCAGGCACCGGGTTGCTGACGTGGGTGAAGGGTGCAGTTGCCAGTGGTGGTATTCTACAAAGAGTAGCCGAGAAGGCGAAGAATTCAGTAGATTCAATGATCACTACCCTTGATCCACAGATGAAGGAATATCTTAAAAGCGGAGGAGATCTGTACATAGTGGTCGCATCGGATAAAGACGTGAAAGTATCACCAATAAGAGAAGCTTTTCAGACAGTTTTTGGAAAGGCGACTGTGGTAGGTTTCGCGGCTCAGTCTGACGTGACAGCGGCTCAGCCGGTCGGCTATGCGGCCGCTTATGCAGCAGCGAAACAGAGGTTAGCAGATCTTCGGTCCAGACATTCGGAAATAACAAACAATGTTCCCCTAGTGGCCGTTGAGAGTTTCTTGCACGAAGCGATCGCAGACAGATGGTACGAGATGTCGTTGATGATCCTGTCGCAGCCGTCTCTAGGCGTTGAACTGCAAGTGCAGTCGCAGGGCGCGGGCGTGCCGGGCGCCGCCGTGTCCGCCGCGGCCGCCGCCACCGCGCCCTCCTACCCGCACGCGCAGACCGGCTACAGCCTCACCGTAGGATCCATCATGGCCGACAGCCTACAGGTCCCGCACACCGACTGGCAAGAGGCGTCGACCGGCGTGTCTAGGAGGGAAATTCTTTTGTTAGCGGCTAAGTCACTGGCGGGCTCATACAAACGGGTACTAGCGGTATCCGCTGCCGAGACCTAA

Protein

MSSDRKKIPDPPTPVPSTGNLLSNVAPPLQLPNFVTAVAEPMPTSQREPVEHPVPVQPIVIQQPTKIDQQASEKFCPAIPPSKGTPLMSIRSPEDSETAQTPESIPEISPEMDSFSDIMPGTGLLTWVKGAVASGGILQRVAEKAKNSVDSMITTLDPQMKEYLKSGGDLYIVVASDKDVKVSPIREAFQTVFGKATVVGFAAQSDVTAAQPVGYAAAYAAAKQRLADLRSRHSEITNNVPLVAVESFLHEAIADRWYEMSLMILSQPSLGVELQVQSQGAGVPGAAVSAAAAATAPSYPHAQTGYSLTVGSIMADSLQVPHTDWQEASTGVSRREILLLAAKSLAGSYKRVLAVSAAET

Uniprot

H9J3M6   A0A2A4J2S4   A0A2H1VPD0   A0A194QCK6   A0A212EGY8   S4PDY1   + More
A0A2J7QJR3   A0A2J7QJR7   A0A2J7QJT0   A0A088A622   B0WFG2   A0A182IW56   A0A0N0BKM1   A0A2M3Z7L9   A0A0N1I8I7   A0A1S4FB56   A0A2M4CXP2   Q179E7   A0A2M4BQ42   A0A2M4BQ45   A0A2M4BQ44   A0A2J7QJS5   A0A182F3J2   A0A1B0GL09   A0A182VDQ2   A0A2M4AFS6   U5EQY6   A0A2A3EKD9   A7UVA8   A0A1S4H0I2   A0A182G1D6   A0A0T6B1P0   A0A1Q3FD28   A0A310SN30   A0A1Y1M0A2   A0A1Q3FD05   A0A1Q3FD45   A0A154P5V3   A0A0L7R200   A0A1W4XE74   A0A1L8DBW6   K7J0G7   A0A1L8DBT7   A0A182PE77   A0A182MEN7   A0A182Q5X5   W5JAQ9   A0A1L8DC65   A0A182WW27   A0A182HGI4   A0A182L6C6   A0A182VUF7   A0A182TN43   A0A0P5ZEX9   A0A1B6DQF6   A0A182SKP2   A0A0P6EYF6   A0A0P5UE99   A0A182YRE8   A0A182MYX4   A0A182RIQ4   A0A182KBQ2   A0A2L2Y9F8   A0A084WH22   A0A0P5VT27   K1Q157   A0A1B6F6D3   A0A2P8YDG9   A0A3B3SY45   A0A3B3SYT6   A0A1B6C033   A0A2D0SRJ3   A0A1B6MA66   A0A1S3M8V0   W5L0Z0   A0A3B1IQK0  

Pubmed

19121390    26354079    22118469    23622113    17510324    12364791    + More
26483478    28004739    20075255    20920257    23761445    20966253    25244985    26561354    24438588    22992520    29403074    29240929    25329095   

EMBL

BABH01021636    NWSH01003621    PCG66036.1    ODYU01003470    SOQ42302.1    KQ459185    + More
KPJ03273.1    AGBW02014995    OWR40753.1    GAIX01003446    JAA89114.1    NEVH01013549    PNF28833.1    PNF28830.1    PNF28829.1    DS231917    EDS26199.1    KQ435697    KOX80792.1    GGFM01003775    MBW24526.1    KQ460772    KPJ12493.1    GGFL01005916    MBW70094.1    CH477353    EAT42859.1    GGFJ01006065    MBW55206.1    GGFJ01006066    MBW55207.1    GGFJ01006064    MBW55205.1    PNF28832.1    AJWK01034038    AJWK01034039    GGFK01006324    MBW39645.1    GANO01004029    JAB55842.1    KZ288229    PBC31656.1    AAAB01008984    EDO63407.1    JXUM01136543    KQ568445    KXJ68999.1    LJIG01016272    KRT81099.1    GFDL01009578    JAV25467.1    KQ759828    OAD62655.1    GEZM01044892    GEZM01044891    GEZM01044890    GEZM01044889    JAV78060.1    GFDL01009564    JAV25481.1    GFDL01009559    JAV25486.1    KQ434809    KZC06578.1    KQ414667    KOC64859.1    GFDF01010126    JAV03958.1    GFDF01010300    JAV03784.1    AXCM01001281    AXCN02000815    ADMH02001788    ETN61086.1    GFDF01010127    JAV03957.1    APCN01004236    GDIP01044612    JAM59103.1    GEDC01009400    JAS27898.1    GDIQ01055769    JAN38968.1    GDIP01115656    JAL88058.1    IAAA01012243    IAAA01012244    LAA03980.1    ATLV01023778    KE525346    KFB49516.1    GDIP01095857    JAM07858.1    JH816331    EKC22530.1    GECZ01023991    JAS45778.1    PYGN01000681    PSN42301.1    GEDC01030574    JAS06724.1    GEBQ01007161    GEBQ01002004    JAT32816.1    JAT37973.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000235965    UP000005203    + More
UP000002320    UP000075880    UP000053105    UP000053240    UP000008820    UP000069272    UP000092461    UP000075903    UP000242457    UP000007062    UP000069940    UP000249989    UP000076502    UP000053825    UP000192223    UP000002358    UP000075885    UP000075883    UP000075886    UP000000673    UP000076407    UP000075840    UP000075882    UP000075920    UP000075902    UP000075901    UP000076408    UP000075884    UP000075900    UP000075881    UP000030765    UP000005408    UP000245037    UP000261540    UP000221080    UP000087266    UP000018467   

PRIDE

H9J3M6   

Pfam

PF01931   NTPase_I-T

Interpro

IPR026534   PRRC1        + More
IPR026533   NTPase/PRRC1       
IPR029001   ITPase-like_fam       

SUPFAM

SSF52972   SSF52972       

Gene 3D

3.90.950.10    

ProteinModelPortal

H9J3M6   A0A2A4J2S4   A0A2H1VPD0   A0A194QCK6   A0A212EGY8   S4PDY1   + More
A0A2J7QJR3   A0A2J7QJR7   A0A2J7QJT0   A0A088A622   B0WFG2   A0A182IW56   A0A0N0BKM1   A0A2M3Z7L9   A0A0N1I8I7   A0A1S4FB56   A0A2M4CXP2   Q179E7   A0A2M4BQ42   A0A2M4BQ45   A0A2M4BQ44   A0A2J7QJS5   A0A182F3J2   A0A1B0GL09   A0A182VDQ2   A0A2M4AFS6   U5EQY6   A0A2A3EKD9   A7UVA8   A0A1S4H0I2   A0A182G1D6   A0A0T6B1P0   A0A1Q3FD28   A0A310SN30   A0A1Y1M0A2   A0A1Q3FD05   A0A1Q3FD45   A0A154P5V3   A0A0L7R200   A0A1W4XE74   A0A1L8DBW6   K7J0G7   A0A1L8DBT7   A0A182PE77   A0A182MEN7   A0A182Q5X5   W5JAQ9   A0A1L8DC65   A0A182WW27   A0A182HGI4   A0A182L6C6   A0A182VUF7   A0A182TN43   A0A0P5ZEX9   A0A1B6DQF6   A0A182SKP2   A0A0P6EYF6   A0A0P5UE99   A0A182YRE8   A0A182MYX4   A0A182RIQ4   A0A182KBQ2   A0A2L2Y9F8   A0A084WH22   A0A0P5VT27   K1Q157   A0A1B6F6D3   A0A2P8YDG9   A0A3B3SY45   A0A3B3SYT6   A0A1B6C033   A0A2D0SRJ3   A0A1B6MA66   A0A1S3M8V0   W5L0Z0   A0A3B1IQK0  

KEGG

101738290    no KO assigned | (RefSeq) protein PRRC1-like

GO

GO:0034199   GO:0034237   GO:0005737   GO:0001757   GO:0010669   GO:0005794  

PANTHER

PTHR23276  

Length:

360

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0489400000000001

Exp number, first 60 AAs:

0.00279

Total prob of N-in:

0.03204

outside

1  -  360

 

 

Pi

162.617744

Theta

162.369202

Tajima's D

0.081537

CLR

1.354

CSRT

0.392030398480076

Interpretation

Uncertain